mRNA_C-linearis_contig10.623.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.623.1
Unique NamemRNA_C-linearis_contig10.623.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: D7G8S6_ECTSI (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8S6_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 8.530e-141
Identity = 207/258 (80.23%), Postives = 229/258 (88.76%), Query Frame = 3
Query:   96 IQRGAFRIGVRVRGNSAIAPPRHRQQQTMAFSTPTAVKKIAAIVMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTLPKGKPTAG 869
            + RGAFR+ V +RG+      +H+  QT        +KK+AA++MGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSE GKTAK FMDQGKFVPD+IIFEVL+AAVERAKG+GKHILLDGFPRSTAQA ALK+HLPVDMVMNLDVPRQII+DRLTDRWIHPGSGRVYAYAYRPPKEHG DDVTGE LVRRDDDQPEVVE+RLAKYE+TTRPLLDLY EE LLHSFSGE+SD+IY +VRKFL++ LPKGKP AG
Sbjct:    5 VPRGAFRL-VGIRGSPFRQRHQHQHPQTRG------IKKMAAVIMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSETGKTAKEFMDQGKFVPDEIIFEVLMAAVERAKGRGKHILLDGFPRSTAQAKALKDHLPVDMVMNLDVPRQIIIDRLTDRWIHPGSGRVYAYAYRPPKEHGVDDVTGEKLVRRDDDQPEVVEERLAKYERTTRPLLDLYGEEGLLHSFSGEQSDVIYAEVRKFLAEVLPKGKPAAG 255          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: A0A835YWM7_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM7_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.490e-83
Identity = 130/224 (58.04%), Postives = 172/224 (76.79%), Query Frame = 3
Query:  189 STPT--AVKKIAAIVMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGK--HILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTLP 848
            S PT  A + I A++MGAPGSGKGTIS KIL+DF F H+STGDLLR+E +AG+++G  AK++M++G  VPD ++ +++   + R +   K  ++LLDGFPR+ AQA+ L E + VDMV++LDVPR  I++RLTDRW+HPGSGRVYAY+YRPP++HG DD TGE LVRR+DD PEVVE RLAKYE T  PLL  Y++  ++H+FSG  SD IY DV K+L+  LP
Sbjct:   24 SLPTMPAARSITALIMGAPGSGKGTISSKILKDFPFTHVSTGDLLREETRAGTKLGLQAKSYMERGTLVPDTLMVDLVSEVLARLRTSAKAPNLLLDGFPRTLAQALVLDEKIAVDMVLSLDVPRATIVERLTDRWVHPGSGRVYAYSYRPPQKHGVDDATGEELVRREDDSPEVVEARLAKYEATAAPLLAHYAQHGIVHTFSGTRSDEIYVDVHKYLAGALP 247          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: B7G252_PHATC (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G252_PHATC)

HSP 1 Score: 234 bits (596), Expect = 1.200e-71
Identity = 110/207 (53.14%), Postives = 152/207 (73.43%), Query Frame = 3
Query:  222 IVMGAPGSGKGTISGKILRDF-HFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSK 839
            +++G PG GKGTISGKIL+DF  F H+STGDLLR  +  G+++GK AK+FM+ GK VPD ++  +L+   +    +G+ +LLDGFPR+  QA AL+E   +D V+NLD+P   I++R+ DRWIHP SGR+Y+Y+Y+PPK  GKDDVTGE LV+RDDD+PE V  RLA Y+K T PL+D Y  + L+ +F G ESD+IY  V+ +L +
Sbjct:    2 LILGKPGGGKGTISGKILKDFPRFHHVSTGDLLRQHVNEGTQLGKEAKSFMESGKLVPDSLMINLLMDDAKPYIEEGRSLLLDGFPRTLQQAQALEEVAHIDTVVNLDIPTNTIVERIADRWIHPASGRIYSYSYKPPKAVGKDDVTGEPLVQRDDDKPESVRTRLAAYDKVTAPLVDWYRRKGLVQTFRGTESDVIYPQVKAYLEE 208          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: A0A7S2RAU8_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAU8_9STRA)

HSP 1 Score: 230 bits (586), Expect = 1.520e-69
Identity = 114/218 (52.29%), Postives = 155/218 (71.10%), Query Frame = 3
Query:  189 STPTAVKKIA---AIVMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFL 833
            +T  A+ K+A   A++MG PG GKGTIS KIL+DF F H+STGD+LR  ++  + IG+ AK FMD G  VPD ++  ++++ +E+       +LLDGFPR+  QA AL +HL VDM +NL+VP + I+ R+++RWIHPGSGR+YAY Y PPK HG DD TGE LV+RDDD PE V +RL  Y+  T PLLD Y +  +L +FSG ESD+IY  V+++L
Sbjct:   34 NTVRAMSKLARFTALIMGPPGGGKGTISKKILKDFSFTHLSTGDVLRANVREATAIGQEAKGFMDSGNLVPDDLMVRLVLSELEKTPVD--RLLLDGFPRTRPQAEALGKHLHVDMALNLNVPTETIVARISNRWIHPGSGRIYAYDYNPPKVHGVDDETGEPLVQRDDDTPEAVRKRLTTYDTLTAPLLDFYGDHGVLQNFSGTESDVIYPMVKEYL 249          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: A0A7S1VV41_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV41_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.540e-68
Identity = 118/256 (46.09%), Postives = 165/256 (64.45%), Query Frame = 3
Query:   93 MIQRGAFRIGVRVRGNSAIAPPRHRQQ----QTMAFSTPTAVKKIAAIVMGAPGSGKGTISGKILRDF-HFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTL 845
            M++  A  +  RV   +     RH +Q     T+    P+   +   +++G PG GKGT+SGKIL DF    HISTGDLLR  +   + +G  AK+FMD GK VPD ++ ++++        +G+ +LLDGFPR+  QA AL   + VD+V+NL++P   I++R+ DRWIHPGSGRVY Y+Y+PPKEHGKDDVTGE LV+RDDDQP  V  RL  YE  T PL+  Y+++ +L +FSG ESD+IY  V+ +L   +
Sbjct:    1 MLRVVASSVSCRVAPTTRATAFRHIRQCGFMSTLPVQEPSEDSRFV-LILGKPGGGKGTVSGKILEDFPKLHHISTGDLLRQHVLDETSLGMEAKSFMDDGKLVPDALMIDLVMTEATPTVEEGRSLLLDGFPRTIDQAKALDRVVNVDLVINLNIPTDTIVERIADRWIHPGSGRVYNYSYKPPKEHGKDDVTGEALVQRDDDQPHKVRTRLQAYETVTAPLVGYYADKGVLETFSGTESDVIYPMVKVWLQDKI 255          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: K0T839_THAOC (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T839_THAOC)

HSP 1 Score: 224 bits (570), Expect = 5.450e-67
Identity = 112/228 (49.12%), Postives = 161/228 (70.61%), Query Frame = 3
Query:  165 RQQQTMAFSTPTAVKKIAAIVMGAPGSGKGTISGKILRDF-HFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTL 845
            R    M  +   A    + +++G PG GKGTIS KIL DF  F H+STGD LR  ++  +EIG+ AKT+MD G  VPD+++ ++++     A  +G+++LLDGFPR+ AQA AL + L VD+ +NL VP + I++R++DRWIHP SGRVY+Y+Y+PPK  G DD TG+ LV+RDDD+PE V +RL KYE+ T PL+D YS++ +L +F G  SD+IY +V+K+L + L
Sbjct:   33 RMFAAMPLAGEEATNTYSLLILGKPGGGKGTISEKILSDFPQFRHVSTGDELRQHVRNQTEIGREAKTYMDVGGLVPDKLMVKLVMNDAVDAIKRGQNLLLDGFPRTAAQARALDDKLGVDLCINLCVPDETIVERISDRWIHPASGRVYSYSYKPPKVEGLDDETGDPLVQRDDDKPESVLKRLKKYEEATMPLVDYYSKKGVLQTFQGTMSDVIYPEVKKWLDEKL 260          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: A0A7S2URG3_9STRA (GTP:AMP phosphotransferase, mitochondrial n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2URG3_9STRA)

HSP 1 Score: 223 bits (567), Expect = 8.960e-67
Identity = 106/209 (50.72%), Postives = 149/209 (71.29%), Query Frame = 3
Query:  222 IVMGAPGSGKGTISGKILRDFH-FAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTL 845
            +++G PG GKGTISGKIL+DF  F H+STGD+LR  +  G++IG  AK +MD G+ VPD ++  +++     A   G  +LLDGFPR+  QA+AL + L VD+V+NL VP + I++R++DRWIH  SGRVY+Y+Y+PPK  GKDD+TGE LV+RDDD+PE V  RL +Y++ T PL+D Y  + +L +F G  SD IY +V  +L + L
Sbjct:   40 LILGKPGGGKGTISGKILKDFPMFRHLSTGDVLRQHVMNGTDIGLQAKEYMDSGELVPDSLMIRIVMEDTNAAMKSGDSLLLDGFPRTKEQAVALDKELDVDLVINLCVPTETIVERISDRWIHSPSGRVYSYSYKPPKVKGKDDITGEDLVQRDDDRPECVRNRLMRYDEVTSPLVDYYDAKGVLKTFHGTMSDKIYPEVNTWLDEKL 248          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: A0A7S4HR90_9STRA (GTP:AMP phosphotransferase, mitochondrial n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR90_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.230e-66
Identity = 107/209 (51.20%), Postives = 152/209 (72.73%), Query Frame = 3
Query:  222 IVMGAPGSGKGTISGKILRDFH-FAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTL 845
            +++G PG GKGTIS K+L+DF  F+H+STGD+LR  ++ G++IG  AK FMD+G  VPD+++  +++   E     GK +LLDGFPR+  QA AL E L VD+V+NLD+P   I+ R+++RWIHP SGRVY Y Y+PP+E G DD TGE LV+RDDD+PE V +RLAKY++ T PL+D Y  + +L +F G  SD+IY +V+ +L+  +
Sbjct:  133 LMLGKPGGGKGTISNKVLKDFPMFSHLSTGDVLRQHVREGTDIGVEAKRFMDEGGLVPDELMIRLVMEDAESVVEDGKSLLLDGFPRTIDQAKALDESLNVDLVVNLDIPTDTIVQRISERWIHPASGRVYNYTYKPPREEGIDDKTGEPLVQRDDDKPESVRRRLAKYDEATAPLVDYYQSKGVLATFQGTMSDVIYPEVKVWLNDQI 341          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: W7U7D5_9STRA (GTP:AMP phosphotransferase, mitochondrial n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U7D5_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.110e-66
Identity = 105/214 (49.07%), Postives = 157/214 (73.36%), Query Frame = 3
Query:  204 VKKIAAIVMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTL 845
            V+++ A+++G PG GKGTIS K+L+DF+F H+STGD+LR  ++  + +GK A+T+M +G  VPD +I +++VA +  +KG    +LLDGFPR+  QA+AL+ H+ +D+V++LD+P Q I++R+++RWIH  SGR YAY Y PPK+ G DDVTGE LV+R+DD+ E V+ RL +Y++ T PL+D Y  +  L +FSG ESD+IY  V+  L   L
Sbjct:    4 VQRLTALILGPPGGGKGTISKKLLKDFNFLHLSTGDVLRRHVRDQTAVGKAAQTYMIRGALVPDNVIVDLVVAELA-SKGHVPRLLLDGFPRTIPQALALEPHVSIDVVIDLDIPDQTIIERISNRWIHAASGRTYAYDYNPPKQKGVDDVTGEPLVQREDDKEETVKARLEQYKQITTPLVDHYRYQGTLATFSGTESDVIYPYVKAHLDAFL 216          
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Match: UPI00074FD411 (GTP:AMP phosphotransferase AK3, mitochondrial n=1 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FD411)

HSP 1 Score: 220 bits (561), Expect = 3.610e-66
Identity = 106/212 (50.00%), Postives = 150/212 (70.75%), Query Frame = 3
Query:  213 IAAIVMGAPGSGKGTISGKILRDFHFAHISTGDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKHILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGRVYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDLYSEENLLHSFSGEESDIIYGDVRKFLSKTLP 848
            + A++MG PGSGKGTIS +I++ F   H+S+GDLLR+ +  G+EIG  AKT++DQG+ +PD I+ ++++  ++  +    H+LLDGFPR+  QA AL++  P+D V++LDVP + I  RLT RWIHP SGRVY   + PPK  G DD+TGE LV+RDDD+PE + +RL  YE  TRP+L+ Y  + +L SFSG E+D I+  V +FL   LP
Sbjct:    8 LRALIMGPPGSGKGTISSRIVKHFALKHLSSGDLLRENMNKGTEIGIIAKTYIDQGRLIPDDIMTQLMLNELQTLEQH--HLLLDGFPRTVPQAEALEKRCPIDTVIDLDVPFETIQQRLTARWIHPASGRVYNLEFNPPKVPGTDDITGEPLVQRDDDKPETIMKRLKSYEAETRPVLEYYRRKRVLESFSGTETDKIWPHVHRFLQTKLP 217          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.623.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8S6_ECTSI8.530e-14180.23GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... [more]
A0A835YWM7_9STRA1.490e-8358.04GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
B7G252_PHATC1.200e-7153.14GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
A0A7S2RAU8_9STRA1.520e-6952.29GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
A0A7S1VV41_9STRA2.540e-6846.09GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
K0T839_THAOC5.450e-6749.12GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
A0A7S2URG3_9STRA8.960e-6750.72GTP:AMP phosphotransferase, mitochondrial n=1 Tax=... [more]
A0A7S4HR90_9STRA1.230e-6651.20GTP:AMP phosphotransferase, mitochondrial n=2 Tax=... [more]
W7U7D5_9STRA2.110e-6649.07GTP:AMP phosphotransferase, mitochondrial n=3 Tax=... [more]
UPI00074FD4113.610e-6650.00GTP:AMP phosphotransferase AK3, mitochondrial n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2954473..2958034 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score413.3
Seed ortholog evalue9.3e-113
Seed eggNOG ortholog2880.D7G8S6
Preferred nameAK3
KEGG rclassRC00002
KEGG koko:K00939,ko:K00944
KEGG ReactionR00127,R00157,R00333,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categorymitochondrion
GOsGO:0001889,GO:0003674,GO:0003824,GO:0004017,GO:0004550,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0005759,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006172,GO:0006213,GO:0006220,GO:0006725,GO:0006753,GO:0006754,GO:0006756,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007517,GO:0007596,GO:0007599,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009147,GO:0009150,GO:0009151,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009200,GO:0009201,GO:0009205,GO:0009206,GO:0009208,GO:0009215,GO:0009218,GO:0009259,GO:0009260,GO:0009262,GO:0009394,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009605,GO:0009611,GO:0009941,GO:0009987,GO:0009991,GO:0015949,GO:0016020,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0021537,GO:0021549,GO:0021772,GO:0021988,GO:0022037,GO:0022607,GO:0030900,GO:0030902,GO:0031667,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0034357,GO:0034641,GO:0034654,GO:0042060,GO:0042221,GO:0042278,GO:0042493,GO:0042592,GO:0042594,GO:0042651,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046031,GO:0046033,GO:0046034,GO:0046039,GO:0046041,GO:0046051,GO:0046060,GO:0046128,GO:0046131,GO:0046390,GO:0046483,GO:0046899,GO:0046939,GO:0046940,GO:0048513,GO:0048731,GO:0048732,GO:0048856,GO:0048871,GO:0050145,GO:0050817,GO:0050878,GO:0050896,GO:0051259,GO:0051260,GO:0055035,GO:0055086,GO:0060322,GO:0061008,GO:0061061,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0072527,GO:0090407,GO:0097009,GO:1901068,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-22_002830.1
EC2.7.4.10,2.7.4.3
COG Functional cat.F
BiGG ReactioniRC1080.CRv4_Au5_s12_g2970_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons6
Model size1329
Cds size867
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.623.1prot_C-linearis_contig10.623.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2954930..2958029 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927347.586026-UTR-C-linearis_contig10:2954472..29549291622927347.586026-UTR-C-linearis_contig10:2954472..2954929Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2954473..2954929 -
1690879642.8961284-UTR-C-linearis_contig10:2954472..29549291690879642.8961284-UTR-C-linearis_contig10:2954472..2954929Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2954473..2954929 -
1622927347.6622875-UTR-C-linearis_contig10:2958029..29580341622927347.6622875-UTR-C-linearis_contig10:2958029..2958034Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2958030..2958034 -
1690879642.9598005-UTR-C-linearis_contig10:2958029..29580341690879642.9598005-UTR-C-linearis_contig10:2958029..2958034Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2958030..2958034 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927347.5954566-CDS-C-linearis_contig10:2954929..29551031622927347.5954566-CDS-C-linearis_contig10:2954929..2955103Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2954930..2955103 -
1690879642.9094841-CDS-C-linearis_contig10:2954929..29551031690879642.9094841-CDS-C-linearis_contig10:2954929..2955103Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2954930..2955103 -
1622927347.6077347-CDS-C-linearis_contig10:2955622..29556851622927347.6077347-CDS-C-linearis_contig10:2955622..2955685Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2955623..2955685 -
1690879642.9195054-CDS-C-linearis_contig10:2955622..29556851690879642.9195054-CDS-C-linearis_contig10:2955622..2955685Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2955623..2955685 -
1622927347.6186194-CDS-C-linearis_contig10:2956015..29561721622927347.6186194-CDS-C-linearis_contig10:2956015..2956172Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956016..2956172 -
1690879642.9278038-CDS-C-linearis_contig10:2956015..29561721690879642.9278038-CDS-C-linearis_contig10:2956015..2956172Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956016..2956172 -
1622927347.6293314-CDS-C-linearis_contig10:2956423..29565371622927347.6293314-CDS-C-linearis_contig10:2956423..2956537Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956424..2956537 -
1690879642.9358103-CDS-C-linearis_contig10:2956423..29565371690879642.9358103-CDS-C-linearis_contig10:2956423..2956537Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956424..2956537 -
1622927347.6391313-CDS-C-linearis_contig10:2956776..29569001622927347.6391313-CDS-C-linearis_contig10:2956776..2956900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956777..2956900 -
1690879642.9438152-CDS-C-linearis_contig10:2956776..29569001690879642.9438152-CDS-C-linearis_contig10:2956776..2956900Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2956777..2956900 -
1622927347.650237-CDS-C-linearis_contig10:2957794..29580291622927347.650237-CDS-C-linearis_contig10:2957794..2958029Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2957795..2958029 -
1690879642.9517848-CDS-C-linearis_contig10:2957794..29580291690879642.9517848-CDS-C-linearis_contig10:2957794..2958029Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2957795..2958029 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.623.1

>prot_C-linearis_contig10.623.1 ID=prot_C-linearis_contig10.623.1|Name=mRNA_C-linearis_contig10.623.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=289bp
MLRPPHTRHSLRVWYVLTRRADGQTANHKMIQRGAFRIGVRVRGNSAIAP
PRHRQQQTMAFSTPTAVKKIAAIVMGAPGSGKGTISGKILRDFHFAHIST
GDLLRDEIQAGSEIGKTAKTFMDQGKFVPDQIIFEVLVAAVERAKGQGKH
ILLDGFPRSTAQAIALKEHLPVDMVMNLDVPRQIIMDRLTDRWIHPGSGR
VYAYAYRPPKEHGKDDVTGETLVRRDDDQPEVVEQRLAKYEKTTRPLLDL
YSEENLLHSFSGEESDIIYGDVRKFLSKTLPKGKPTAG*
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mRNA from alignment at C-linearis_contig10:2954473..2958034-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.623.1 ID=mRNA_C-linearis_contig10.623.1|Name=mRNA_C-linearis_contig10.623.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3562bp|location=Sequence derived from alignment at C-linearis_contig10:2954473..2958034- (Chordaria linearis ClinC8C monoicous)
GATCGATGCTTCGTCCCCCACACACACGGCACAGCCTTCGTGTGTGGTAC GTCTTGACCAGACGTGCCGACGGACAGACGGCCAACCACAAAATGATTCA GCGCGGTGCGTTCCGCATTGGTGTGAGAGTGCGTGGGAACAGCGCGATTG CGCCGCCCAGGCATCGGCAGCAGCAGACGATGGCTTTTTCCACACCAACA GCAGTGAAAAAGATTGCCGCCATCGTCATGGGAGCTCCAGGTTGGCCGCA TTTTCACGTAGTATTGGCAGCAGTTTCGCTGTTCAGATTGCCCCTCTCTT CTCCCTGTCTCTGCCTGCTGTTATCCTCCATTCAGTGTGTTGAAGTCATC ACGAAAAAAAGGTGAACAACACATAATCTCACCGAGACGTTACTTTCCGA CACCAGCCCGCACGGCGGAGGAGAGTACCAGCATACCAGCAGCCGTGTTG GTAGTAGATGACCTCCCAGCTGCCGTCTGGGACGAGCATTATATAGCCGG GAGGCTCCGGCCTCTGGTTTGGGGTTTGTTACGAGGACGATTCGGGGGGG TGCTGCTGTTATGCTTTTGATCTGCTTGTGAATGACGCGTTGCACCCGTT ACCTTCGTCGGAAAACAGGCAGAGAGCTCACTGCAAGATCTCCCCGTAGT CTTGATTGAGTCTTGAGGGGTAGTCTAAAGAGAGCCTTCTGTGCATGAAA ATTACGAACGACGCTCCTTTCAACTGGGCATCCGCGGCCACCCTTCTGCG GCTGGCATCTCTGTCGGCGCGAAATGTCGAAGTTGATGTTGGTCGATCCG ACGACCCAACATGTTTGTTCTTCCCTGTGGTGGGGCAGAATATCGATGTC GGACCCTCCGAGTTTCCTGCGAGAAAGGCCATCCCGGCGTATCTACATAC TTCTCTCGGGACTTCATTTCTTTTTGGCGGCTCCGCCGGATGAATGATTG TTATCTCTTCTCTCAGCGCTGGTTATTATACTGACCGCCGGTCCTCGGCC CCCGTTGTTTAGCAGTAGACTGCACGCATGCCTGTGAAACAAACAATCCA CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCGGAACATGTTTCGTTTCGCTGCCAACCAGGGAGCGGGAAGGGGAC GATATCGGGCAAGATTTTGCGCGACTTTCACTTCGCGCACATCAGCACAG GCGACCTGCTTCGCGACGAGATCCAAGCCGGATCGGAAATAGGGAAGACG GCTAAGACGTGGGTCTTTTCATTGCCCGCCGATTAGCGTTTTGGCCGCGT TAGTTTACAGAGCACACCAAGTTTATGAACGAGACACATCAAGGAACTTC AACCCCGCTATGGAAGCGTCATTGACGTGGGAAAGAATCGGAAACGGGTA CCCTAGCATGGGACATGATCGATCCTGATGCCTGGCAGGCGCTTCCCCCG GAGAAACCCACAAAAGTATAATCAATCCGATTGTGTTTTCGCTGCAGGTT CATGGACCAGGGGAAGTTCGTTCCCGACCAGATCATTTTTGAGGTGCTTG TGGCAGCGGTCGAGCGAGCCAAGGGCCAAGGGAAGCATATACTGCTTGAT GGATTTCCAAGGTGAGGCATGTTCTTGTTTCGGATGCTGCACTCTTGTGT TTGTGGTCGTCTATGCCGCGAACACCGCCCCCGCTCTTGCGGACCCGGTT GTGTCGACTGATTATCTGGTGCTGCAGCAGCCAGTGCACCTTTGTTGGCG TGGTACTGGAAGGCAGTTGCTAGTGTTTCAAGTTGAGGAGTGTGATGAGT AAAAAAGCCGGCACCAGCCATTTTGTTGACGAGGCTGGCTGTGGTCGTGA TGGTGGTGGCAGATCTACTGCTCAGGCGATTGCTCTCAAGGAGCACCTGC CGGTGGACATGGTGATGAATCTCGACGTGCCGAGGCAGATCATCATGGAC CGCCTTACCGACCGCTGGATACACCCGGGCTCTGGGAGAGTGTACGCGTA CGCGTATCGGCCCCCAAAGGTGTGTTGGTTTCGGGTCTATGTTGTGTACC AGTAGAAGTTAGAATAGCGTCGCCCTCTCGGTAGTTGTTCTCAGCTCAAC GTGACTTTTGATGAGGCAGCCCCACACAAAGTAAGTAGGCGTGTTAGGTG TAGATACGCACGTGAACAGCCTGGTAGGAGTACGTGAACAACCGCTCGGT TTCTCCTCGGTACCCCAACACCGGCTCCTGTGCCCCCCCGCCTCTCCCTC TTGCTGTCTCCGGGCGTGCTTGCTCTTGCTTGCTTTGGGTTGGCCCCACA CGCGCTGTGTGCTGACTGTTGCAACTACCGAATTTATGTGTTGGATAAGG AGCACGGCAAAGATGACGTCACAGGGGAGACGCTAGTTCGCAGGGACGAC GACCAACCAGAGGTGAGCCAGCTGAATACACGGCCACCGCAGATAGCAAA TGAGCCATACCCTGGGTGCCATCGCTGTCTGTCGTAGGGCAACGATTGTC CATTCCTTCCATTCATTGTCATGGTCTCTCCAGCGGTTTGTGGACGAATG ACTTAAGACAGGCATGATGTTGACGTATTTGCTGCTGCATGTGGTCTGCG GAAGGTACATGATTCAGCTGTCTCAATACCTGTACGCTCAAATGCTTTTG TCGGTAGAGACGCTGCTGCGGCTGGTGCTGCTGCTTTGCGTGCTGATATT TTGCGATATAATGTGGGGAAGTGGGGCACAACCAAGACATTTCACGCCAG CAAAGCGTTTCGCCGAAAATCACTTCCTCCTTCGGCGTGCCGAAGAAGTT CGTTCAAGATAAACTTCCAAGTGCACTCTGCTGCCAATAGGTATAACCCC CCCGCCCTTTCTGTATGCCCCATATGCTGCGATCGATTACCCTTCCGTGT TGGATGCCTCGTGCTGCGGGCCAAAAAAAAGGTGGTCGAACAACGCCTTG CCAAGTACGAGAAAACTACGCGGCCGCTCCTAGACCTGTACAGCGAAGAG AACCTTCTTCACAGCTTTTCCGGGGAAGAAAGCGACATCATCTACGGAGA TGTCCGGAAGTTTCTCTCCAAGACTCTACCAAAAGGGAAACCTACCGCTG GGTAGATAGATGAGTAGCCCCGGGGGGTCTTGGAGGGTGTCAATTCCCGT GGTGGTTTTCTCCCGGTAGGTGGCTGGATGTTGGCGTAAGGAATCACTCT GTTTTCCCCGCACTCTTGTGCGAAGGGTAATTGGGGTAGGGCTATACCTG CTGCTGTAGCAAGTCTTGTTCGCCGCGTTTATGTGATAGTAGCATTCGCA AGCATTCCTTTGGCATGCCCCACCTCCTGGGTGCAGTACACAAAGCCTTC GTGTGTACTACATACAGGCACACGCCCCAACCTGCTGGGTGACTCCTGGC GAACGCCGGGTTAGGGACTAAATTGTTTGTACAAAGTGTTGGGAGTTCCC GAAGCTTCATTTGGATGCTGTCATTTGCTCGGCCACCGTTTTTCGAGTCC GCCGGCTTGGCGACTTGGAAGAGGCGCAGCAGGGTCCGATGAAGAGCGCG TAAGGTCGGGGC
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Coding sequence (CDS) from alignment at C-linearis_contig10:2954473..2958034-

>mRNA_C-linearis_contig10.623.1 ID=mRNA_C-linearis_contig10.623.1|Name=mRNA_C-linearis_contig10.623.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1734bp|location=Sequence derived from alignment at C-linearis_contig10:2954473..2958034- (Chordaria linearis ClinC8C monoicous)
ATGCTTCGTCCCCCACACACACGGCACAGCCTTCGTGTGTGGTACGTCTT
GACCAGACGTGCCGACGGACAGACGGCCAACCACAAAATGATTCAGCGCG
GTGCGTTCCGCATTGGTGTGAGAGTGCGTGGGAACAGCGCGATTGCGCCG
CCCAGGCATCGGCAGCAGCAGACGATGGCTTTTTCCACACCAACAGCAGT
GAAAAAGATTGCCGCCATCGTCATGGGAGCTCCAGATGCTTCGTCCCCCA
CACACACGGCACAGCCTTCGTGTGTGGTACGTCTTGACCAGACGTGCCGA
CGGACAGACGGCCAACCACAAAATGATTCAGCGCGGTGCGTTCCGCATTG
GTGTGAGAGTGCGTGGGAACAGCGCGATTGCGCCGCCCAGGCATCGGCAG
CAGCAGACGATGGCTTTTTCCACACCAACAGCAGTGAAAAAGATTGCCGC
CATCGTCATGGGAGCTCCAGGGAGCGGGAAGGGGACGATATCGGGCAAGA
TTTTGCGCGACTTTCACTTCGCGCACATCAGCACAGGCGACCTGCTTCGC
GACGAGATCCAAGCCGGATCGGAAATAGGGAAGACGGCTAAGACGGAGCG
GGAAGGGGACGATATCGGGCAAGATTTTGCGCGACTTTCACTTCGCGCAC
ATCAGCACAGGCGACCTGCTTCGCGACGAGATCCAAGCCGGATCGGAAAT
AGGGAAGACGGCTAAGACGTTCATGGACCAGGGGAAGTTCGTTCCCGACC
AGATCATTTTTGAGGTGCTTGTGGCAGCGGTCGAGCGAGCCAAGGGCCAA
GGGAAGCATATACTGCTTGATGGATTTCCAAGGTTCATGGACCAGGGGAA
GTTCGTTCCCGACCAGATCATTTTTGAGGTGCTTGTGGCAGCGGTCGAGC
GAGCCAAGGGCCAAGGGAAGCATATACTGCTTGATGGATTTCCAAGATCT
ACTGCTCAGGCGATTGCTCTCAAGGAGCACCTGCCGGTGGACATGGTGAT
GAATCTCGACGTGCCGAGGCAGATCATCATGGACCGCCTTACCGACCGCT
GGATACACCCGGGCTCTGGGAGAGTGTACGCGTACGCGTATCGGCCCCCA
AAGATCTACTGCTCAGGCGATTGCTCTCAAGGAGCACCTGCCGGTGGACA
TGGTGATGAATCTCGACGTGCCGAGGCAGATCATCATGGACCGCCTTACC
GACCGCTGGATACACCCGGGCTCTGGGAGAGTGTACGCGTACGCGTATCG
GCCCCCAAAGGAGCACGGCAAAGATGACGTCACAGGGGAGACGCTAGTTC
GCAGGGACGACGACCAACCAGAGGAGCACGGCAAAGATGACGTCACAGGG
GAGACGCTAGTTCGCAGGGACGACGACCAACCAGAGGTGGTCGAACAACG
CCTTGCCAAGTACGAGAAAACTACGCGGCCGCTCCTAGACCTGTACAGCG
AAGAGAACCTTCTTCACAGCTTTTCCGGGGAAGAAAGCGACATCATCTAC
GGAGATGTCCGGAAGTTTCTCTCCAAGACTCTACCAAAAGGGAAACCTAC
CGCTGGGTAGGTGGTCGAACAACGCCTTGCCAAGTACGAGAAAACTACGC
GGCCGCTCCTAGACCTGTACAGCGAAGAGAACCTTCTTCACAGCTTTTCC
GGGGAAGAAAGCGACATCATCTACGGAGATGTCCGGAAGTTTCTCTCCAA
GACTCTACCAAAAGGGAAACCTACCGCTGGGTAG
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