mRNA_C-linearis_contig10.614.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: D7G8R3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8R3_ECTSI) HSP 1 Score: 1226 bits (3171), Expect = 0.000e+0 Identity = 593/770 (77.01%), Postives = 659/770 (85.58%), Query Frame = 1 Query: 1 PIFVVVLAYCMTGVLCMCSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAGSVATLTIVADGGSVYDSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRIL--TVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFL----RCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQEDGSEVASVTFVTQHGDVPLLIADDSLLVDDTNGGAPGSGSVTINEDLQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTTHLRGSTAGGASAAQPAVSPQDGGSTHKYRDMTLISAQSKLEALAAQ 2292 P+F+ VL + VL MCSNSCSR+GDCNPFGRCDCW GWGG DCSERMCATG+AWSDR TATD AHGV ECS+RG+CDR GRC CM GFSG+ACERS+CPRGCSGHGHCRS+SDYA++YRG DSIQ+LY+DVWD +KLH CVCD GYHG DCALR CPTGDDPLTTGQVNE+QL+VC+ATAGSFVLY EG+PTT I + AS A +++ALSAIP IQGVNV FS P SGAC+S +INVIQVEFLGNFGPLRPMWS+NALTAGSV TLTIVADG S+YDSDA+GY S+KGTKEN +CSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCG+QVTTTAGCPGE+ACSGHGTCDES+FTC+CNDGWT+GDCSLRACPYGWSWFSYPSAE KAHD+RTECSDGG CN ETGAC+CADLFHGAACEYMICPG TTDACHGHGR + L W + +T N++ + + L FL RCMTMAELA A++NGDATDYTYGEDPNEGSTWDAHRIFGC CDDGYSGYDCSERVCP GDDPGSWGQE EVQT+TC+AT G TFTL FRQ ETEPI +A+S D+KE LEAL TID VSVAF TG VCQ+DGSEVASVTFVTQHGDVPLL+ D SLLVDD+NGGAPGSG+VT+ E +QGTTEE+TCSNRGLCDR+TGECSCFPGWSSSNGAG IGDRSDCGYRVPMTTHLRGS + G S +V PQ G ST+KY D+++I+AQSKLEALA Q Sbjct: 9 PLFLAVLL--PSRVLSMCSNSCSRRGDCNPFGRCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAVGRCKCMTGFSGSACERSSCPRGCSGHGHCRSLSDYAQDYRGDDSIQYLYDDVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQGVNVEFSIPLSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDAIGYTSVKGTKENEDCSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEIACSGHGTCDESDFTCNCNDGWTAGDCSLRACPYGWSWFSYPSAEDKAHDKRTECSDGGFCNGETGACECADLFHGAACEYMICPGGTTDACHGHGRQFHNNQSVRAVLNKLNIWLR-TTLNRSSLATTAL-------FLCMSDRCMTMAELATFAEDNGDATDYTYGEDPNEGSTWDAHRIFGCYCDDGYSGYDCSERVCPVGDDPGSWGQEPEVQTMTCQATNG---TFTLTFRQAETEPIPRNASSEDLKETLEALATIDVVSVAFETGDTVCQDDGSEVASVTFVTQHGDVPLLMVDASLLVDDSNGGAPGSGNVTVVEGVQGTTEEETCSNRGLCDRHTGECSCFPGWSSSNGAGEIGDRSDCGYRVPMTTHLRGSKSRGESTVAKSVLPQ-GESTNKYSDLSVIAAQSKLEALARQ 764
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A6H5KZZ6_9PHAE (EGF-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZZ6_9PHAE) HSP 1 Score: 781 bits (2018), Expect = 9.270e-277 Identity = 383/586 (65.36%), Postives = 414/586 (70.65%), Query Frame = 1 Query: 97 RCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDV-----------------------WDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAGSVATLTIVADGGSVYDSDAVGYA---------------------------------------------------------------------SIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFG 1578 RCDCW GWGG DCSERMCATG+AWSDR TATD AHGV ECS+RG+CDR GRC CM GFSGAACERSNCPRGCSGHGHCRS+SDYA++YRG DSIQ+LY+DV WD +KLH CVCD GYHG DCALR CPTGDDPLTTGQVNE+QL+VC+ATAGSFVLY EG+PTT I + AS A +++ALSAIP IQGVNV FS P SGAC+S +INVIQVEFLGNFGPLRPMWS+NALTAGSV TLTIVADG S+YDSD +GY S+KGTKEN ECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCG+QVTTTAGCPGE+ACS HGTCDES+FTCDCNDGWT+GDCSLRACPYGWSWFSYPSAE KAHD+R ECSDGG CNRETGAC+CADLFHGAACEYMICPG TTDACHGHGR CMTMAELA A++NGDATDYTYGEDPNEGSTWDAHRIFG Sbjct: 7 RCDCWAGWGGADCSERMCATGIAWSDRATATDTAHGVVECSNRGECDRAAGRCKCMTGFSGAACERSNCPRGCSGHGHCRSLSDYAQDYRGDDSIQYLYDDVRKSRLGNLHNSIWALLLRFCCQVWDSDKLHTCVCDTGYHGFDCALRSCPTGDDPLTTGQVNEIQLVVCEATAGSFVLYYEGYPTTDILYDASEADIESALSAIPDIQGVNVKFSIPFSGACSSTAINVIQVEFLGNFGPLRPMWSFNALTAGSVTTLTIVADGSSIYDSDVIGYVRHTGGFRRPVKYHDKGMLHTCNVYLGCVLTPREQALTPYFHLLFNSSRLTCLSCRATSFTTPSHWNRYTSVKGTKENEECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGYQVTTTAGCPGEIACSSHGTCDESDFTCDCNDGWTAGDCSLRACPYGWSWFSYPSAEDKAHDKRAECSDGGYCNRETGACECADLFHGAACEYMICPGGTTDACHGHGR------------------------------------------CMTMAELATFAEDNGDATDYTYGEDPNEGSTWDAHRIFG 550
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A835YWB3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWB3_9STRA) HSP 1 Score: 706 bits (1821), Expect = 1.250e-243 Identity = 385/786 (48.98%), Postives = 473/786 (60.18%), Query Frame = 1 Query: 49 MCSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRG--CSGHGHCRSMSDYAENYRGR-DSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVF-SNPSSGACNSASIN--VIQVEFLGNFGPLRPMWSYN-ALT---AGSVA--TLTIVADGGSVYDSDAVG-YASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTT-DACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTI-DEVSVAFATGTGVCQEDGSEVAS---VTFVTQHGDVPLLIADDSLLVDDTNGGAPGSGSVTINED------------LQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTTHLRGSTAGGASAAQPAVSPQDGGSTHK-----------YRDMTLISAQSKLEAL 2283 MC N CS GDCN + +C CW GW G DCSER C G AWSD +ATDVAH AECS+RG CDR +GRC+CM GF+GAAC+R +C R C+GHG C S+ YAE++R S YN+VWD N +H CVCD GY G +CALR+CP GDDPLTTGQVNEVQL+VC G+F L + + +I+ ASAA V++AL I +I+ V V F S+P+ GAC ++ VI VEF NFG LRPMW + ALT GSV +T++ADG S+ D G + SIKGTKE AECSNRG+CD + G+C CF +NDDIFA SDGY GPG R DCG VT GCPGE+ACSGHG CD F+C+C +GWT+GDCS RAC YGWSWF+YP+A+ AHD ECSD G C+RE G C+C DLF G ACEYM+CP D C GHG+ C++MA+LAL+A +G AT +YG N+ TWDA +FGC CDDGY+G+DC+ R CP GDD S+ Q EVQ L C A G+ L FR T I DA +A ++ ALEALPTI +V+V ++ G S A+ VTF+T HGDVP L AD S L GAP SG VT D ++GT EE CS RGLCDR+ G C+CFPGW SS+G G+GDR DCGYRVP + L G GG+ + GG H Y+DM++I + L Sbjct: 30 MCPNRCSMHGDCNQYNQCVCWSGWSGADCSERQCPLGTAWSDDASATDVAHANAECSNRGACDRSSGRCSCMPGFTGAACDRMSCSRDDHCNGHGTCYSLQSYAEHFRSPVTSEAFYYNNVWDANGIHRCVCDEGYTGFNCALRECPVGDDPLTTGQVNEVQLVVCHGIGGAFALVYKDERSGSIAADASAADVRSALLKITSIRDVKVTFLSDPTKGACARTLVDEQVIAVEFTQNFGALRPMWGISTALTPPLGGSVTDPAVTVIADGSSIVDFYGNGPFYSIKGTKEGAECSNRGLCDRESGVCSCFDTNDDIFAGSDGYGGPGLRADCGHAVTAIGGCPGEIACSGHGACDAVTFSCNCQEGWTAGDCSQRACAYGWSWFAYPTADDVAHDTWAECSDAGICDRERGLCRCGDLFTGGACEYMVCPADKQGQQCSGHGQ------------------------------------------CLSMAQLALDATADGVATAISYGASANDARTWDARSVFGCACDDGYAGHDCALRRCPRGDDAMSYAQAPEVQLLRCAAAGGA---LRLTFRSATTATIRFDANAAALEAALEALPTILGDVAVTYSAGAAAPLCAASAAANTVLVTFLTAHGDVPALSADTSAL--QGTDGAPNSGVVTFKTDGASFAAAPAPVSVRGTQEEIECSGRGLCDRHKGVCACFPGWFSSDGRQGVGDRGDCGYRVPESA-LHGGVRGGSGVL---AESEIGGMLHALDYARHNGVQHYKDMSVIGPDQSFKDL 764
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A7S2D5U1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5U1_9STRA) HSP 1 Score: 654 bits (1687), Expect = 6.390e-224 Identity = 334/724 (46.13%), Postives = 438/724 (60.50%), Query Frame = 1 Query: 52 CSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSY-NALTAGSVATLTIVADGGSVY-DSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESN----FTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQEDGSE-----VASVTFVTQHGDVPLLIADDSLLVD---DT---------NGGAPGSGSVTINEDLQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTT 2154 C N CS GDCN + RCDCW W GGDCSER+C G+AW+D T D AH AECS+RG C R +G C+CM GF G AC R+ C C+ G C ++ YA++Y DS+Q+ Y+++WD K+ CVCD Y DC+ R+CPTGDDPLTTGQVNE QL C AT GSF G T TI A ++ AL P I V+V FS + AC + ++N++ +EF NFG L P+ Y + L+ G T+T+ DG + DSD Y S+ G KEN ECS RG+C +G C C+ +N D + SSDGY GTRGDCG+ TTT+ CPG+VACS HG CD+++ ++C C+DG+T GDC+ R CPYG +WF YPS + H E ECS+GG+C+R TG C C D ++GAAC+YM+C G TT+AC+GHG+ CM+M+ELAL AD+NGD TDY YG DPN+ STWDA RI+GC CD G++GYDCSE CP GDDPG++GQ E+Q + C T + G F L FRQEET+ I+ +A++ ++ LE L I +++V ++ G C D ++ V + F+T+HGD+P + DDS LVD DT +G S T + GTTE + CSNRGLCDR TG C+CF G+ SS+G G G DCGY+ P T Sbjct: 49 CPNLCSGHGDCNIYSRCDCWDEWTGGDCSERICPFGVAWADDATGDDEAHAEAECSNRGVCARSSGECSCMAGFGGKACHRTECTSDCNDVGRCLTLMKYADDYYDTDSVQYTYDEMWDSEKIMGCVCDYPYVNYDCSERECPTGDDPLTTGQVNEQQLFYCTATGGSFAFLYLGEYTDTIKAKAGEVAIADALMTHPRISTVSVSFSITNGTACQTDAVNIVTIEFEQNFGDLSPLVPYTDDLSTGG--TITMSTDGSTALTDSDGTSYVSVTGDKENDECSGRGLCIASDGTCSCYDTNSDTYYSSDGYGNTGTRGDCGYPATTTSTCPGDVACSAHGVCDDNDDDATYSCSCSDGYTGGDCAQRECPYGLAWFWYPSEDEVTHTEMVECSNGGTCDRSTGMCTCGDAYYGAACDYMMCGGGTTNACNGHGQ------------------------------------------CMSMSELALNADDNGDETDYEYGTDPNDASTWDASRIYGCKCDYGWTGYDCSEMECPLGDDPGTYGQYNELQLMQC---TANAGNFKLSFRQEETKTIAYNASAEVVERKLEELFGIYDLTVTYSYGNEFCITDDTDDATLNVVQIQFITEHGDLPKITVDDSNLVDSNTDTKLVDFYIKADGQTISQDSATEFTSIMGTTESEYCSNRGLCDRATGLCACFTGYYSSDGQGNHGAIGDCGYQGPYKT 725
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A7S3XN04_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XN04_HETAK) HSP 1 Score: 641 bits (1653), Expect = 2.250e-219 Identity = 341/714 (47.76%), Postives = 429/714 (60.08%), Query Frame = 1 Query: 52 CSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSY-NALTAGSVATLTIVADGGSVYDSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESN--FTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVC--QEDGSEVASVTFVTQHGDVPLLIADDSLLVDDTNGGAPGSGS-VTINED---------LQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPM 2148 C N C+ +G CN + +C+C G+ G DCSE++C G+AW D T D AH AECS+RG CDR G CTCMEGF+G+ACER +C C+G G C S +A NY DS+ ++Y WD +K+ CVCD G+ DC LR+CPTGDDPLTTGQVNE QL C A+ GSFVLY G P+ TI++ A+ V+AAL+ I + V+V F SS CN+ INV+ VEF NFG P+ +Y + L G++ TI GG++ D D Y S+ GTKEN CSNRG CDT G C+CF++ SS+GY G RGDCG+ TT CPGEV CS +G CD+ + + C C D W SGDCSLR CP G SWFSYPS + KAHDE ECS+ G C+ G C C D F GAACEYMIC G T C+G+G+ C++MAELA++A +NGDA TYG DPN+G TWDAHR+F CLCDDGY GYDCS R CPTGDDP ++ E Q C A GTFT FRQ+ T I+ +AT A+ ALE L +I++V V F++G VC D + +V F T GD+P L DDS L + GSG+ +T D +QGTTE+ CSN GLCD TG C+CFPGW+SSNG GG G+ DCG+R+ + Sbjct: 24 CHNLCNGKGQCNIYSQCECIEGYQGADCSEKICPFGVAWGDMPTDEDTAHAQAECSNRGICDRTNGDCTCMEGFTGSACERLSCESDCNGAGICLSYRKFAANYLNDDSVGYVYETPWDADKVWGCVCDEGFQNYDCILRECPTGDDPLTTGQVNEKQLFKCTASGGSFVLYYRGKPSDTIAYDATEDEVEAALTYINRLTEVDVSFGTGSS-VCNADDINVVTVEFTQNFGEQPPLVAYTDGLDDGAI---TIKTAGGTLTDDDGTTYTSVTGTKENDVCSNRGTCDTSNGSCDCFSTXXXXXXSSNGYADAGNRGDCGYPSTTIGACPGEVECSLNGYCDDGDQEYRCYCADTWFSGDCSLRGCPEGRSWFSYPSEDDKAHDEMVECSNMGICDTAEGVCSCRDGFFGAACEYMICGGGTDTPCNGNGQ------------------------------------------CLSMAELAIKATSNGDAAATTYGSDPNDGGTWDAHRLFHCLCDDGYEGYDCSLRSCPTGDDPATYDDAREQQLFQCAA---DAGTFTATFRQQTTGAINANATKAEFVSALEELSSINKVEVRFSSGATVCYGSSDDANTVAVRFQTPTGDLPDLTFDDSGL-------SSGSGTPITTATDGDTLGGQTSVQGTTEDVVCSNHGLCDTATGTCTCFPGWASSNGYGGEGELGDCGWRIDI 681
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: F0YJI0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJI0_AURAN) HSP 1 Score: 622 bits (1604), Expect = 7.540e-212 Identity = 333/712 (46.77%), Postives = 408/712 (57.30%), Query Frame = 1 Query: 52 CSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHG-LDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAGSVATLTIVADGGSVY-DSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQED--GSEVASVTFVTQHGDVPLLIADDSLLVDDTNGGAPGSGSVTINED------------LQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYR 2139 C NSC+R+G C+ FG C C+ GW G DCS R C AW+D ++ D AH AECS+RG CDR TG C CMEGF+G ACE C C HG C SM A +S + Y WD +K++ CVCD Y +C +R CP+GDDPLT+ QVNEVQ++ C AT+G FVL G PT I AAL AI V+V FS + AC SIN I +EF NFG L P+ A+T T+TI DG ++ D+ Y S+KGTKE+ +CSNRG+CD C C +N D ++SSDGY G RGDCG VTT CPG+VACS HG CD ++ C C DGW DCSLR+CP G +WFSYPS AHDE ECS GG C+ G C C F GAACEY+ CPG + AC GHGR C +MAELAL A +NGDA+ YG DPN G TWDA+R+FGC CD G++GYDCS R+C GDDP ++GQ EVQ C G+ GTF L+FRQ+ T I + T D++ +EAL TI +V V F+ G C + G V SVTF T+HGD+P + AD SLL D G G G+VT D + GTTEE CS RGLCDR +G CSCF G+SSS+G GG G + DCG+R Sbjct: 24 CPNSCNRKGACDIFGSCSCFSGWTGSDCSLRSCPWSYAWTDYASSDDTAHAKAECSNRGLCDRTTGSCECMEGFTGRACEHMACDFNCHYHGECLSMRRLALTQYSDESERFAYESPWDADKIYGCVCDSPYTATFNCGMRVCPSGDDPLTSNQVNEVQILTCMATSGKFVLLLHGKPTGDIRKGMHIDQFMAALQESEAIDAVSVTFSVDNGTACQEDSINAISIEFTQNFGSLPPLI---AVTDNLEGTVTISGDGVTILRDTANFEYLSVKGTKEDEQCSNRGLCDPFSATCTCMNTNSDTYSSSDGYGNEGDRGDCGHAVTTINECPGDVACSNHGVCDVISYRCACEDGWFGADCSLRSCPLGLAWFSYPSEANLAHDEWVECSGGGICDYTLGLCTCGAQFSGAACEYLACPGGSATACTGHGR------------------------------------------CASMAELALAATDNGDASPRIYGADPNSGLTWDANRVFGCDCDGGWAGYDCSLRICSFGDDPNTYGQTNEVQLFECE---GTGGTFRLIFRQKATLEIPFNTTRDDLETLIEALNTITDVDVVFSNGNSTCTDSSLGYNVVSVTFNTEHGDIPSMTADTSLLYDTNYGTQIGGGTVTFFTDGAAAASNDLAVSVIGTTEEIECSGRGLCDRLSGTCSCFDGYSSSDGMGGSGSQGDCGHR 687
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A7S4E5E8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5E8_9STRA) HSP 1 Score: 601 bits (1550), Expect = 1.080e-203 Identity = 323/717 (45.05%), Postives = 413/717 (57.60%), Query Frame = 1 Query: 52 CSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGL-DCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAGSVATLTIVADGGSVY-DSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQEDGSEVASVT--FVTQHGDVPLLIADDSLLVDDTNGGAPGSGSVTINED------------LQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTT 2154 C N+C+ +G C+PFGRC C+ GW G DC R C T AW+D ++ +VAH AECS+RG CD TG C C EGF+G AC+ C R C G C SM ++A + DS Q +Y WD +K++ CVCD Y + +CA R CP+GDDP+T Q NEVQ C AT G+FVL GH + I +KAAL AI V+V +S + AC + S+NV+++EF +FG L P+ + AG T+ + ADG +V+ DS + S KGTKE+ ECSNRGIC+ + C C +N D F SSDGY G RGDCGF T CPG ACSG G CD S + C C G+T DCSLR CP G +WFSYPS + HD CS G+C+ G C CA F G ACE++ CPG T+ C+ HGR C TM E+AL A +NGD+ YG DPN G+TWDA RI+GC+CD+G++GYDCSER C GDDP ++GQ EVQ C G+ GT TL FRQ+ T PI+ +A+ +++EALE L I +V V F++G C + G V +VT FVT+HGD+P L AD S L D G G GSV D + GTTE CS RGLCDR+TG+C CFPG++SS+G GG G + DCGYR + T Sbjct: 22 CPNNCNLKGKCDPFGRCTCFSGWTGADCGYRKCPTHYAWADVASSDEVAHARAECSNRGLCDEGTGECECAEGFTGKACQHLACDRECGFKGKCVSMRNFASSQYNEDSQQFVYETPWDADKMYGCVCDSPYDAVFNCAFRRCPSGDDPMTPDQKNEVQYFKCMATGGTFVLLMAGHASGDIRTGMKEHQLKAALEQSAAITEVDVTYSIDNGTACTTDSVNVVRIEFTQDFGSLPPLVPLDDDLAG---TIQVSADGQTVFTDSLGADFVSKKGTKEDEECSNRGICNPFDATCLCLDTNGDTFKSSDGYGNEGNRGDCGFAATAIDECPGMTACSGAGICDLSTYRCSCAKGFTGADCSLRTCPKGLAWFSYPSEDNVGHDVLEVCSGAGTCDTTKGECACAVPFTGNACEFIQCPGGLTNECNKHGR------------------------------------------CATMREMALLATSNGDSDPRLYGSDPNNGNTWDADRIYGCICDEGWTGYDCSERECTYGDDPNTYGQVNEVQLFECA---GTAGTLTLSFRQKTTLPIAYNASRQELEEALEWLTNIGDVIVLFSSGNSTCTDIGLSVNAVTVAFVTEHGDLPDLSADTSQLFDSNFGDEIGGGSVVFFVDGAAAASDASLVSVTGTTESLECSGRGLCDRSTGQCECFPGYASSDGVGGPGKQDDCGYRKALCT 690
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A812RSS9_SYMMI (TNC protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RSS9_SYMMI) HSP 1 Score: 567 bits (1461), Expect = 2.350e-191 Identity = 296/650 (45.54%), Postives = 388/650 (59.69%), Query Frame = 1 Query: 253 CTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAG-SVATLTIVADGGSVYDS-DAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCG-FQVTTTAGCPGEVACSGHGTCD--ESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQEDGSEVASVTFVTQHGDVPLLIADDSLLVDDTNG-GAPGSGSVTINED---------LQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTTH 2157 C CMEGF+G ACER C GC+ G C SM YAE+YR +S Y +WD K+ CVCD G+ G DC+ CP GDDPLT QVNEVQLI C+AT G+FVL+ +G P+ T+S+ A+ ++ AL IP + V V FS PS ACN +NVIQ+EFL FG L P+ + T S ++ + ADG + +D D + + S+KGTKE +C+ RG CD +G C C+ +N D + SS+GY PGTRGDCG F+ T + CPG + CSGHG C+ + + C C++GWT GDCS R CP G SW SYPS + KAHD+ T CSD G C++E+G C+C F+G ACEYM C G D C GHGR CM+M ELA+ D NGD T+++YG DPN TWD HR+FGC CD GY+GYDCS R CP GDDPG++ EVQ L C A G F L FRQE TE ++ +AT +++ AL + T+ +++VAF GT C G+ V+F T H D+P L + LVDDTN G+PG+G + I D ++GTTE C+NRG+CD +TG C CF W+SS+G G +G+R DCG+R + T+ Sbjct: 2 CDCMEGFTGTACERLKCEGGCNNFGKCVSMHTYAEDYRDEESQSFEYTTIWDAEKIMTCVCDVGHTGYDCSEWVCPDGDDPLTVNQVNEVQLIECRATMGTFVLFYKGLPSKTLSYTATVEQIEEALEHIPLVTDVTVTFSQPSMSACN-VDVNVIQIEFLEQFGALVPLVAETDSTMKQSGGSIRVSADGVTCFDDKDGIIFKSVKGTKEAEDCAGRGACDASQGFCSCYDTNGDAYFSSNGYGEPGTRGDCGAFKANTVSSCPGLLQCSGHGLCESGDGTYRCSCSEGWTGGDCSERECPKGLSWTSYPSEDNKAHDKYTVCSDMGLCDKESGTCKCQAAFYGQACEYMACGGGREDPCSGHGR------------------------------------------CMSMNELAVWDDENGDKTEFSYGLDPNNPHTWDGHRVFGCKCDMGYTGYDCSLRECPRGDDPGTYDDHVEVQVLRCIA---DGGRFKLGFRQENTEWLAWNATEVEVQTALVNIDTLSDLTVAFINGTAACNVTGNVFMVVSFDTNHADLPALKRHINELVDDTNANGSPGTGVIDIATDGEFLEGVQSIKGTTENAYCNNRGICDFSTGTCHCFLNWASSDGKGKVGNRGDCGWRNQINTN 605
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: A0A7S3HDR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HDR3_9STRA) HSP 1 Score: 510 bits (1314), Expect = 2.540e-170 Identity = 268/573 (46.77%), Postives = 341/573 (59.51%), Query Frame = 1 Query: 52 CSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYNDVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTGQVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQGVNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSY-NALTAGSVATLTIVADGGSVYDSDAVG--YASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTT-----AGCPGEVACSGHGTCDESNFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPGDTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEET 1746 C N C+ G C+ +GRC C + G DCSER+C G AWSD TATDVAH AECS+RG C+R G+C CM GFSG++CER +C C+ G C SM D+A R S Q Y WD +K+ C CD G DC+ CP GDDPLT QVNEVQLI C +TAGSFVLY G P+ +I A+AA V+AAL AIP I V V FS S G NV+ VEF FGPL P+ ++ S L I ADG + + +D G ++S+KG+KE+ C+NRG+CD ++G+C C+ +N D++ SS+GY G RGDCGF V+++ CPG + CSGHG C++S F C C+ GW GDCSL CP G +WF YP+A+ AH + CS+ G+C+ TG C+C + F+G AC+YM C G + C+GHGR CMTMAELAL AD NGDAT+Y YG DPN +TWD R+ GC CD GYSGYDCS + CP GDD G++ +E+Q L C A TG+ FTL FRQ+ T Sbjct: 20 CPNHCNSHGVCDKYGRCTCDAEYQGADCSERICPFGHAWSDVATATDVAHAEAECSNRGICNRKNGKCKCMAGFSGSSCERLDCKDQCNDRGICYSMKDFAGRTRNELSQQFTYTSRWDNDKIKGCQCDYPATGYDCSQSLCPVGDDPLTPSQVNEVQLIHCASTAGSFVLYYNGVPSKSIPFTANAAMVRAALEAIPQITEVKVTFSQ-SHGTICQIKPNVVSVEFTQQFGPLNPLVPVLDSAFDASGGLLEISADGRTTF-ADVTGQRFSSVKGSKESTVCANRGLCDLKDGVCGCYDTNGDVYGSSNGYGKAGPRGDCGFVVSSSEEKGVTTCPGLLQCSGHGVCEDSTFQCHCSAGWFGGDCSLMQCPQGQTWFGYPTADESAHLDYATCSNMGTCDTRTGRCECREGFYGEACQYMACGGPQGNPCNGHGR------------------------------------------CMTMAELALWADKNGDATEYEYGSDPNNFATWDYDRVHGCYCDPGYSGYDCSLKDCPVGDDAGTYHDASEIQILQCVANTGN---FTLSFRQQVT 545
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Match: D8LET9_ECTSI (Tenascin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LET9_ECTSI) HSP 1 Score: 510 bits (1314), Expect = 1.850e-167 Identity = 296/738 (40.11%), Postives = 386/738 (52.30%), Query Frame = 1 Query: 43 LCMCSNSCSRQGDCNPFGR-CDCWVGWGGGDCSERMCATGLAWSDRVTATDVAHGVAECSSRGQCDRVTGRCTCMEGFSGAACERSNCPRGCSGHGHCRSMSDYAENYRGRDSIQHLYN-DVWDGNKLHICVCDPGYHGLDCALRDCPTGDDPLTTG-------QVNEVQLIVCQATAGSFVLYNEGHPTTTISHAASAASVKAALSAIPAIQG-----VNVVFSNPSSGACNSASINVIQVEFLGNFGPLRPMWSYNALTAGSVATLTIVADGGSVYDSDAVGYASIKGTKENAECSNRGICDTQEGICECFTSNDDIFASSDGYNGPGTRGDCGFQVTTTAGCPGEVACSGHGTCDES-NFTCDCNDGWTSGDCSLRACPYGWSWFSYPSAEGKAHDERTECSDGGSCNRETGACQCADLFHGAACEYMICPG-----------------DTTDACHGHGRILTVHIPTTSPTLRCWSKLSTTNKAFIQVSKLPRPCRMYFLRCMTMAELALEADNNGDATDYTYGEDPNEGSTWDAHRIFGCLCDDGYSGYDCSERVCPTGDDPGSWGQEAEVQTLTCRATTGSTGTFTLMFRQEETEPISPDATSADIKEALEALPTIDEVSVAFATGTGVCQEDGSEVASVTFVTQHGDVPLLIADDSLLVDDTNGGAPGSGSVTINEDLQGTTEEDTCSNRGLCDRNTGECSCFPGWSSSNGAGGIGDRSDCGYRVPMTTHL 2160 LC SC D + R C C GW G DCS +C G AWSD+ TD AH AECS+RG CDR+ G C C GF G AC R CP+ C HG C+SM+ +A + H Y+ DVWD ++ C CD GY G C+LR C GDDPLT Q NE Q + C AT GSF L G T I+++AS+ V AL +P++ G V+V FS+ + AC SA + +EFL +FG L L V+ LT G + +I GTKE+ +CS RG+CDT + +C C D +S+GYN G RGDCG+ +T CPGE++CSGHG C S + CDC+DGW DCSL+ CP+G SWF P+A+ AH RTECSD G+C+R +G C C D F G+AC+ M CPG D+ AC+GHG+ C+TMA LA D NG ATDYTYG PN+ TWD + GCLCDDGY G+DCS R CP GDDP + Q+ E+Q + C G MFRQ ET + AT A+++ A EAL T+ +V+V+ G +C + ++ F+T+ GDVPL+ A S + S+ ++E GT E CS +GLCD +TG C CFPG+ SS+G G DCG+ +P + L Sbjct: 33 LCSGHGSCESSKDGSTSARQCSCNTGWTGADCSLMLCPLGPAWSDKAKGTDDAHAPAECSNRGYCDRLEGVCVCDTGFEGQACGRRTCPKNCMNHGRCQSMAYFASVQDPGEGTVHAYDGDVWDAEMMYGCNCDAGYSGPMCSLRSCSVGDDPLTGTDEDPDGEQYNEQQELTCAATGGSFTLIFRGFTTAAIAYSASSEDVVDALQDLPSLYGSYDTAVSVQFSSSDTQACTSAG-HSWTIEFLQDFGDLP-------LLVAGVSKLTHSTSG---ISASVTVEEAITGTKESVDCSGRGLCDTDDRVCTCEPEYD----TSNGYNEEGRRGDCGYVITAVTHCPGEISCSGHGVCSGSPTYACDCSDGWEGADCSLKTCPFGKSWFMRPTADNVAHLTRTECSDMGTCDRVSGECACVDGFEGSACDRMSCPGAAAASSVEGEAGGGTYDDSDTACNGHGQ------------------------------------------CVTMAMLAEATDENGVATDYTYGGTPNDPLTWDHDMVQGCLCDDGYEGHDCSLRTCPYGDDPDTHSQDNEIQEVEC-FDADDDGQVVFMFRQAETSALEVSATEAEVEAAFEALSTLTDVAVSCDNGA-LCNSTVASTCTIEFLTELGDVPLVSASVSNI-----------DSIAVSEFQTGTKEWTECSFKGLCDYSTGTCECFPGYGSSDGQNNKGSLGDCGHVLPFSGGL 700 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.614.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.614.1 >prot_C-linearis_contig10.614.1 ID=prot_C-linearis_contig10.614.1|Name=mRNA_C-linearis_contig10.614.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=757bp MTGVLCMCSNSCSRQGDCNPFGRCDCWVGWGGGDCSERMCATGLAWSDRVback to top mRNA from alignment at C-linearis_contig10:2885139..2891286+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.614.1 ID=mRNA_C-linearis_contig10.614.1|Name=mRNA_C-linearis_contig10.614.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6148bp|location=Sequence derived from alignment at C-linearis_contig10:2885139..2891286+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2885139..2891286+ >mRNA_C-linearis_contig10.614.1 ID=mRNA_C-linearis_contig10.614.1|Name=mRNA_C-linearis_contig10.614.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4542bp|location=Sequence derived from alignment at C-linearis_contig10:2885139..2891286+ (Chordaria linearis ClinC8C monoicous)back to top |