mRNA_C-linearis_contig10.609.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5KT99_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT99_9PHAE) HSP 1 Score: 550 bits (1417), Expect = 1.190e-177 Identity = 275/462 (59.52%), Postives = 327/462 (70.78%), Query Frame = 2 Query: 401 RLSQSDPIATALGSGLRGRKQPRTEAPKARKLSAVEQRRADVLEMVGNDPVLQEELRERLGMPEPGSVAA----VDAENTRALACSLEALQLNCKSNIGRIAYNTALAVAAGAGEHTCSPEDPCDPAERCLPAPPKGGVTLSQRAESLGVREKTFREAHVRMHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDG-EGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSLLYMEHHELAKWQRQAHTM 1771 RL++SDP+ L SG R QP T P+ R+ +A++ R V + V D VL+EELRE L + E G AA VDAENTRAL S+EAL+ + SNIGR AYNT +A AAGA +HTC P+DP G V+L+ RA+SLGVR+ TFR A RMH DH++ P EA+E+GRY WA RK RSDK D RV+ LA R WHSD +SR GDSGTK MWR SKK G+EYH +R+LMV+GD+ + FLKWP+YL LKAE+LRED++F DPGRT FLSTRCGCLVEPKVSQCACQIHTQQ YL + LM +H +CDCTC WCDG GC KW MCK+LH FS+ AC KV+ L D G FEHW RKPAC A EC++CGFG P GIP +C AL + R VGW+RF DQ ME G VHKKQQ+PQ G LG LW+EF+ HS Y+ HHELAKWQRQAH M Sbjct: 107 RLARSDPLEAHLFSGPRRSPQPTTTPPRQRQ-TAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNM 566
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5JWW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW3_9PHAE) HSP 1 Score: 550 bits (1417), Expect = 4.240e-171 Identity = 275/462 (59.52%), Postives = 327/462 (70.78%), Query Frame = 2 Query: 401 RLSQSDPIATALGSGLRGRKQPRTEAPKARKLSAVEQRRADVLEMVGNDPVLQEELRERLGMPEPGSVAA----VDAENTRALACSLEALQLNCKSNIGRIAYNTALAVAAGAGEHTCSPEDPCDPAERCLPAPPKGGVTLSQRAESLGVREKTFREAHVRMHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDG-EGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSLLYMEHHELAKWQRQAHTM 1771 RL++SDP+ L SG R QP T P+ R+ +A++ R V + V D VL+EELRE L + E G AA VDAENTRAL S+EAL+ + SNIGR AYNT +A AAGA +HTC P+DP G V+L+ RA+SLGVR+ TFR A RMH DH++ P EA+E+GRY WA RK RSDK D RV+ LA R WHSD +SR GDSGTK MWR SKK G+EYH +R+LMV+GD+ + FLKWP+YL LKAE+LRED++F DPGRT FLSTRCGCLVEPKVSQCACQIHTQQ YL + LM +H +CDCTC WCDG GC KW MCK+LH FS+ AC KV+ L D G FEHW RKPAC A EC++CGFG P GIP +C AL + R VGW+RF DQ ME G VHKKQQ+PQ G LG LW+EF+ HS Y+ HHELAKWQRQAH M Sbjct: 731 RLARSDPLEAHLFSGPRRSPQPTTTPPRQRQ-TAIDGHRDGVKQSVLEDDVLKEELRELLRVGELGEAAATKAAVDAENTRALVASIEALKQHSHSNIGRTAYNTVIAAAAGA-QHTCDPDDPXXXXXXXXXXXXHGAVSLTARAQSLGVRDATFRAARTRMHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDNSFTDPGRTLFLSTRCGCLVEPKVSQCACQIHTQQGLYLKAFEMLMPAIHANCDCTCKWCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGRFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFADQVMEDGKVHKKQQLPQGGKLGDLWQEFVEHSKKYLHHHELAKWQRQAHNM 1190
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5K7E6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7E6_9PHAE) HSP 1 Score: 514 bits (1325), Expect = 2.160e-163 Identity = 260/457 (56.89%), Postives = 321/457 (70.24%), Query Frame = 2 Query: 413 SDPIATALGSGLRGRKQPRTEAPKARKLSAVEQRRADVLEMVGNDPVLQEELRERL--GMPEPGS--VAAVDAENTRALACSLEALQLNCKSNIGRIAYNTALAVAAGAGEHTCSPEDPCDPAERCLPAPPKGGVTLSQRAESLGVREKTFREAHVRMHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDGEGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSLLYMEHHELAKWQRQAHTM 1771 SDP+A A G R P T +R+ + E+RR+ ++++ NDPVL E +R L G E + VAA+DA NTRAL SL+AL+ +C S+IG Y TALAVAAGAGEHTC+ D C P +RC P GGV+L++RA SLG+R +TF +A RMH+ +H +AP A EG Y + RK RSD T+P V+ LA WHSD VSR G+SG K+M++ SKK H +R+LM GD + MFL+ +YLALK+ +L +DS F DPGRTTFLSTRCGCLV+P SQCACQIHTQQ YL++L FLMG +H+DCDC C+WCD GC++W+ MC++L FSD AC KVNLL GDS GGFE W RKPAC A +C++CGFGKP GIPT+C A+ K+ R V WIRFEDQ M G VHKKQQ+PQ G L LW EFMAHS YMEHH LAKWQRQAH M Sbjct: 103 SDPLALAHDGGTRSGATPET----SREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHS--YMEHHALAKWQRQAHKM 551
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5JF90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF90_9PHAE) HSP 1 Score: 488 bits (1256), Expect = 1.310e-158 Identity = 245/439 (55.81%), Postives = 307/439 (69.93%), Query Frame = 2 Query: 413 SDPIATALGSGLRGRKQPRTEAPKARKLSAVEQRRADVLEMVGNDPVLQEELRERL--GMPEPGS--VAAVDAENTRALACSLEALQLNCKSNIGRIAYNTALAVAAGAGEHTCSPEDPCDPAERCLPAPPKGGVTLSQRAESLGVREKTFREAHVRMHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDGEGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSL 1717 SDP+A A G R P T +R+ + E+RR+ ++++ NDPVL E +R L G E + VAA+DA NTRAL SL+AL+ +C S+IG Y TALAVAAGAGEHTC+ D C P +RC P GGV+L++RA SLG+R +TF +A RMH+ +H +AP A EG Y + RK RSD T+P V+ LA WHSD VSR G+SG K+M++ SKK H +R+LM GD + MFL+ +YLALK+ +L +DS F DPGRTTFLSTRCGCLV+P SQCACQIHTQQ YL++L FLMG +H+DCDC C+WCD GC++W+ MC++L FSD AC KVNLL GDS GGFE W RKPAC A +C++CGFGKP GIPT+C A+ K+ R V WIRFEDQ M G VHKKQQ+PQ G L LW EFMAHS+ Sbjct: 103 SDPLALAHDGGTRSGATPET----SREEAVAEERRSSAMDLMQNDPVLMERVRAMLDAGAAEQAAAKVAAIDAANTRALRASLQALKQHCNSSIGWTTYQTALAVAAGAGEHTCTDTDVCHPGQRCKPVE-SGGVSLAERANSLGIRHETFSDARWRMHNTNHDIAPKIAASEGCYVYNERKTRSDVTNPEVMALARAFWHSDDVSRATGNSG-KDMYKESKKRDAPSHPRRQLMHKGDSVWRMFLESRRYLALKSRLLEQDSNFTDPGRTTFLSTRCGCLVDPTASQCACQIHTQQTLYLEALSFLMGSIHQDCDCECNWCDDLGCKRWSVMCQDLSKFSDALACEKVNLLEGDSDGGFEFWGRKPACAAMKCSECGFGKPGGIPTNCTAIAKNRERVVAWIRFEDQTMPDGKVHKKQQLPQTGKLEDLWDEFMAHSV 535
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5KI39_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI39_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 9.400e-137 Identity = 190/300 (63.33%), Postives = 222/300 (74.00%), Query Frame = 2 Query: 872 MHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDGEGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSLLYMEHHELAKWQRQAHTM 1771 MH DH++ P +A+E+GRY WA RK R+DK D RV+DLA R WHSD +SR GDSGT+ +WR SKK G+EYH +R+LMV+GD+ + FLKWP+YL LKAE+LREDS+F DPGRT FLSTRCGCLVEPKVSQCACQIHTQQ Y + LM +H +C+CTC+WCDG GC KW MCK+LH FS+ AC K L G FEHW RKPAC A EC + GFG P GIP +C AL + R VGW+RFEDQ ME G VHKKQQ+PQ G LG LW E + HS YM HHELAKWQRQAH M Sbjct: 1 MHKTDHTIPPKDALEKGRYLWAPRKERTDKMDERVMDLARRFWHSDDISRASGDSGTEAVWRPSKKAGEEYHPRRQLMVAGDQVWRKFLKWPEYLGLKAELLREDSSFTDPGRTMFLSTRCGCLVEPKVSQCACQIHTQQGLYHKAFEMLMPAIHANCECTCNWCDGSGCGKWMAMCKDLHSFSEALACEKAGFLAEGRGGRFEHWGRKPACVAMECPEYGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQLPQAGKLGDLWDEVVEHSKKYMHHHELAKWQRQAHNM 300
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5K491_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K491_9PHAE) HSP 1 Score: 422 bits (1084), Expect = 3.340e-132 Identity = 195/301 (64.78%), Postives = 225/301 (74.75%), Query Frame = 2 Query: 872 MHHVDHSVAPSEAVEEGRYCWAARKIRSDKTDPRVLDLAYRHWHSDFVSRGCGDSGTKNMWRASKKTGQEYHSKRELMVSGDKAFDMFLKWPQYLALKAEILREDSTFQDPGRTTFLSTRCGCLVEPKVSQCACQIHTQQKQYLDSLGFLMGGVHRDCDCTCDWCDG-EGCEKWTDMCKNLHGFSDGFACAKVNLLGGDSSGGFEHWARKPACTAGECADCGFGKPNGIPTDCQALQKHSHRPVGWIRFEDQKMEYGTVHKKQQVPQNGPLGTLWKEFMAHSLLYMEHHELAKWQRQAHTM 1771 MH DH++ P EA+E+GRY WA RK RSDK D RV+ LA R WHSD +SR GDSGTK MWR SKK G+EYH +R+LMV+GD+ + FLKWP+YL LKAE+LREDS+F DPGRT FLSTRCGCLVEPK+S CACQIHTQQ YL + LM +H +CDCTC CDG GC KW MCK+LH FS+ AC KV+ L D G FEHW RKPAC A EC++CGFG P GIP +C AL + R VGW+RFEDQ ME G VHKKQQ+PQ G L LWKEF+ HS Y+ HHELAKWQRQAH M Sbjct: 1 MHRTDHTIPPQEALEKGRYLWAPRKERSDKMDERVMGLARRFWHSDDISRASGDSGTKAMWRPSKKAGEEYHPRRQLMVAGDQVWHKFLKWPEYLGLKAELLREDSSFTDPGRTLFLSTRCGCLVEPKISPCACQIHTQQGLYL-KVEMLMPAMHSNCDCTCKRCDGGSGCGKWMAMCKDLHSFSEALACEKVDFLEEDRGGKFEHWGRKPACVAMECSECGFGNPGGIPMNCDALGSMADRVVGWLRFEDQVMEDGKVHKKQQIPQAGKLDDLWKEFVEHSKKYIHHHELAKWQRQAHNM 300
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5L780_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L780_9PHAE) HSP 1 Score: 362 bits (930), Expect = 1.520e-109 Identity = 194/378 (51.32%), Postives = 232/378 (61.38%), Query Frame = 3 Query: 1782 TFLHGTLLVETDFIEKYKHEAAAILTCATAPTTSIMVALVHHSPDGEGRHTTDAWTFLCADKNHDFDFHVYAMGIIAKYYTEGAGRAATAGVSVPMIWMWTDGCGKQYKGKRNFHAVSESLHRLGVVLVHNFAVTSHFKGAHDGVGGLLKTLMRQAETRNLRIHDTAAAHKFLSEYAEGKANDEGGVVGKWSPYKITNFKMELIGAKEIPRPPIDLTGIPGSAKLYQFMGLEQQPERL--------GVSVGVQTAVEVGDMDGGRELLCNPASFLEADVYHAFPAPKKVKETYTCRVRQASCFCSKCRVGEYLECKVASTYPDLVGVVHNRSGTRKANLRSIETQT-----------EDPALLQYDSQVFSVSPGGVK 2858 T L G LL+ETDFIEKY+HEA +LTCATAPTT++MVALVHHSPD G H TDAW FL +D NHDFDFH AM ++ +YT G AATAG + P + M+TDGCGKQYKGKRNF AV++SL RLGV ++HNFAVTSHFKG HDG+G L+K L+R AE RI D AH+FL YA G WSPY+I +F++ G KEIPRPPIDLTGIPGS+KLY F G E + E + SVGVQT V G + L E+ APKK ++ RVR ASC+CS CR+G Y +C VA YPDLVG V +SG R++ TQ E P D + V GG K Sbjct: 199 TALAGELLIETDFIEKYRHEARVVLTCATAPTTTMMVALVHHSPDNRGEHETDAWIFLSSDPNHDFDFHHAAMEVVVAHYTTGPKSAATAGSAAPRVHMFTDGCGKQYKGKRNFRAVAQSLRRLGVRILHNFAVTSHFKGTHDGIGALMKRLLRNAEMHGTRIPDVDVAHEFLLGYAVEADKAREGHFTTWSPYRIKSFEVRKFGPKEIPRPPIDLTGIPGSSKLYFFTGTEDEQEDVQDTFSLVWATSVGVQTDDFVVGAAGDKVLTARKWVVDESRA-RXXXAPKKFTRSWKLRVRGASCYCSTCRIGCYGDCMVAKVYPDLVGEVMEKSGKEMVGRRTLGTQLTGVILPVISSDESPVAPTLDESMGEVGGGGEK 575
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5KY26_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY26_9PHAE) HSP 1 Score: 348 bits (893), Expect = 3.260e-105 Identity = 172/262 (65.65%), Postives = 201/262 (76.72%), Query Frame = 3 Query: 1776 MATFLHGTLLVETDFIEKYKHEAAAILTCATAPTTSIMVALVHHSPDGEGRHTTDAWTFLCADKNHDFDFHVYAMGIIAKYYTEGAGRAATAGVSVPMIWMWTDGCGKQYKGKRNFHAVSESLHRLGVVLVHNFAVTSHFKGAHDGVGGLLKTLMRQAETRNLRIHDTAAAHKFLSEYAEGKANDEGGVVGKWSPYKITNFKMELIGAKEIPRPPIDLTGIPGSAKLYQFMGLE-QQPERLGVSVGVQTAVEVGDMDGGREL 2558 +ATF G LLVETDFIEKYKHEA AILTCATAP+T++MVALVHHSPD +GRH TD W + +D NHDFDFH+YAM II +YY G GRAATAG VP + ++TDGC KQYKGKRNFHAV++SLHRLGVVL+HNFAVTSHFKGAHDG+GGLLK L+R+AE R RIHDT AA FL YAE K D GG WSPY+I F ++L+G +EIPRP +DL GI GS+KLYQFM E Q+ E GV V VQ V + G +E+ Sbjct: 280 LATFSKGELLVETDFIEKYKHEAGAILTCATAPSTTMMVALVHHSPDDDGRHETDTWVVVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFHAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHDTEAAADFLKAYAEAK-EDGGGHFSTWSPYRIRRFHIKLLGHREIPRPFVDLMGISGSSKLYQFMAAEVQEEESSGVGVEVQKENGVPLVGGEKEV 540
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5K6N6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N6_9PHAE) HSP 1 Score: 338 bits (867), Expect = 4.600e-104 Identity = 166/249 (66.67%), Postives = 194/249 (77.91%), Query Frame = 3 Query: 1776 MATFLHGTLLVETDFIEKYKHEAAAILTCATAPTTSIMVALVHHSPDGEGRHTTDAWTFLCADKNHDFDFHVYAMGIIAKYYTEGAGRAATAGVSVPMIWMWTDGCGKQYKGKRNFHAVSESLHRLGVVLVHNFAVTSHFKGAHDGVGGLLKTLMRQAETRNLRIHDTAAAHKFLSEYAEGKANDEGGVVGKWSPYKITNFKMELIGAKEIPRPPIDLTGIPGSAKLYQFMGLE-QQPERLGVSVGVQT 2519 +ATF G LLVETDFIEKYKHEA A+LTCATAP+T++MVALVHHSPD +GRH TDAW F+ +D NHDFDFH+YAM II +YY G GRA TAG VP + ++TDGC KQYKGKRNF+AV++SLHRLGVVL+HNFAVTSHFK A DG+GGLLK L R+ E R RI +T AA FL YAE K D GG WSPY+I F ++L+G +EIPRP +DLTGI GS+KLYQFMG E Q+ E GV V VQT Sbjct: 50 LATFGKGELLVETDFIEKYKHEAGAVLTCATAPSTTMMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRADTAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKSADDGIGGLLKALSRETEERGQRIRNTQAAADFLQVYAEAK-EDGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEVESSGVGVEVQT 297
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Match: A0A6H5KXK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXK6_9PHAE) HSP 1 Score: 331 bits (849), Expect = 2.760e-101 Identity = 167/274 (60.95%), Postives = 200/274 (72.99%), Query Frame = 3 Query: 1884 IMVALVHHSPDGEGRHTTDAWTFLCADKNHDFDFHVYAMGIIAKYYTEGAGRAATAGVSVPMIWMWTDGCGKQYKGKRNFHAVSESLHRLGVVLVHNFAVTSHFKGAHDGVGGLLKTLMRQAETRNLRIHDTAAAHKFLSEYAEGKANDEGGVVGKWSPYKITNFKMELIGAKEIPRPPIDLTGIPGSAKLYQFMGLE-QQPERLGVSVGVQTAVEVGDMDGGRELLCNPASFLEADVYHAFPAPKKVKETYTCRVRQASCFCSKCRVGEYLEC 2702 +MVALVHHSPD +GRH TDAW F+ +D NHDFDFH+YAM II +YY G GRAATAG VP + ++TDGC KQYKGKRNF+AV++SLHRLGVVL+HNFAVTSHFKGAHDG+GGLLK L+R+AE R RIH+T AA FL YAE K D GG WSPY+I F ++L+G +EIPRP +DLTGI GS+KLYQFMG E Q+ E GV V VQ V + G +E++ NP + +AD P K Y RVRQASC+CSKC VG Y +C Sbjct: 1 MMVALVHHSPDDDGRHETDAWVFVSSDPNHDFDFHIYAMDIILRYYITGDGRAATAGTPVPTVHIFTDGCAKQYKGKRNFYAVAKSLHRLGVVLIHNFAVTSHFKGAHDGIGGLLKALLREAEKRGQRIHNTQAAADFLQVYAEAK-EDGGGHFSSWSPYRIKRFHIKLLGHREIPRPFVDLTGISGSSKLYQFMGAEVQEEESSGVGVEVQKEDGVSLVGGEKEVVVNPQRW-QADESTVLTLPAVTKR-YKLRVRQASCYCSKCSVGAYDDC 271 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.609.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.609.1 >prot_C-linearis_contig10.609.1 ID=prot_C-linearis_contig10.609.1|Name=mRNA_C-linearis_contig10.609.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=436bp MVGNDPVLQEELRERLGMPEPGSVAAVDAENTRALACSLEALQLNCKSNIback to top mRNA from alignment at C-linearis_contig10:2857965..2861682+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.609.1 ID=mRNA_C-linearis_contig10.609.1|Name=mRNA_C-linearis_contig10.609.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3718bp|location=Sequence derived from alignment at C-linearis_contig10:2857965..2861682+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2857965..2861682+ >mRNA_C-linearis_contig10.609.1 ID=mRNA_C-linearis_contig10.609.1|Name=mRNA_C-linearis_contig10.609.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2616bp|location=Sequence derived from alignment at C-linearis_contig10:2857965..2861682+ (Chordaria linearis ClinC8C monoicous)back to top |