mRNA_C-linearis_contig10.601.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D8LH64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH64_ECTSI) HSP 1 Score: 592 bits (1526), Expect = 2.150e-182 Identity = 303/448 (67.63%), Postives = 359/448 (80.13%), Query Frame = 1 Query: 2770 DIKDGRRYAWDEMKKTSVKAMDMLMDKEKQFLDSREDESLLAEMEESSCFQMMGLDAYSKISLKGLVDSEEDFNPKSLAFVNHFVRGAQASFRLGRATNFAASTIHLSVNELPPGVKLTTLEEKRFCVFNPGESMTKYSLGMRCVLAGARVKDSGDDSTGESSTCQFLMRFPLYRLLDISRVDGLALCPTTEHSSCVSPTLRHGDAYSQAFSIHNTLDEDLKVFNQIKKAYHRVSREKRSEKSIVENENEKVAFGVKWAKGRSHLVGGAECMNGYLLLEELVTRNGIESFMDRLPDKDAVVKMCNEVLEMNPAKIGSHKNEDHFYPKDFQNKIKEVVDHLIDQEVFSRSDISLFSCALTVMDSVLTAALRKQDTLGQLARNLHRLKCRDVHGKDIAITRCLLPKYFKNKKALENSTCGVVVNHTKDEKCAGAYAVMAVIGRRVMRRLL 4113
DI GR +AW+E KK +A+D LMD E FLDS ED+ L EMEE +CF+MMGL ++ GLV S EDF K LAFVNHFVRGAQASFRLGR TN A+S IHLSVNELPPGV+ TL+E+ ++ PGE T +SLGMRCVLA ARVKDS + G SSTCQFLMR+PLYRLLD+SRVD L LCPTTEHSS VSPTLRH DAYSQAFS H+ DL VF+ IK YH VS+EKRSEK ++ENENE++AFG K+ KGR+HLVG EC+ G+LLLEELV+RNGI+SFM++LPDKD +VKMCNEVLEMNP K +NEDH P +F+ +I+ +VD L++ +RSDISL SC+LTV+DS+LTAALRKQD LGQLA++L+R+KC+DV+G D+AITRCLLP+YFKNKKALENSTCGVVVNHTK EKC GAYAVMAVIGR+VMR L
Sbjct: 762 DITKGRNHAWEETKK--ARAVDTLMDNEVTFLDSSEDKGLRVEMEEKTCFEMMGLINDARAHFTGLVRSTEDFQDKHLAFVNHFVRGAQASFRLGRPTNMASSMIHLSVNELPPGVQAKTLKEQDTQLYQPGEP-TSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMRYPLYRLLDLSRVDNLPLCPTTEHSSHVSPTLRHRDAYSQAFSSHSKRKADLDVFDIIKGGYHSVSQEKRSEKGVIENENERIAFGAKFNKGRTHLVGSDECLQGFLLLEELVSRNGIDSFMEKLPDKDDIVKMCNEVLEMNPRK---RENEDHLCPPEFKQRIEAIVDELVEGNKVTRSDISLLSCSLTVLDSLLTAALRKQDILGQLAKDLYRMKCKDVYGNDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRSFL 1203
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: A0A6H5JY76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY76_9PHAE) HSP 1 Score: 347 bits (889), Expect = 2.260e-102 Identity = 210/451 (46.56%), Postives = 255/451 (56.54%), Query Frame = 1 Query: 2770 DIKDGRRYAWDEMKKTSVKAMDMLMDKEKQFLDSREDESLLAEMEESSCFQMMGLDAYSKISLKGLVDSEEDFNPKSLAFVNHFVRGAQASFRLGRATNFAASTIHLSVNELPPGVKLTTLEEKRFCVFNPGESMTKYSLGMRCVLAGARVKDSGDDSTGESSTCQFLMRFPLYRLLDISRVDGLALCPTTEHSSCVSPTLRHGDAYSQAFSIHNTLDEDLKVFNQIKKAYHRVSREKRSEKSIVENENEKVAFGVKWAKGRSHLVGGAECMNGYLLLEELVTRNGIESFMDRLPDKDAVVKMCNEVLEMNPAKIGSHKNEDHFYPKDFQNKIKEVVDHLIDQEVFSRSDISLFSCALTVMDSVLTAALRKQDTLGQLARNLHRLKCRDVHGKDIAITRCLLPKYFKNKKALENSTCGVVVNHTKDEKCAGAYAVMAVIGRRVMRRLLDDE 4122
DI GR +AW+E KK D+ L EMEE +CF+MMGL ++ GLV S EDF K LA VNHFVRGAQASFRLGR TN A+S IHLSVNELPPGV+ L+E+ ++ PGE T +SLGMRCVLA ARVKDS + G SSTCQFLMR DAYSQAFS H+ L VF+ IK YH VS+EKRSEK ++ENEN ++AFG K+ KGR+HLVG +E+LEMNP K +NEDH P +F+ + + +VD L+++ +LA++L R+KC+DV+GKD+AITRCLLP+YFKNKKALENSTCGVVVNHTK EKC GAYAVMAVIGR+VMRRLL+ E
Sbjct: 92 DITKGRNHAWEETKK---------------------DKGLRVEMEEKACFEMMGLINDARAHFTGLVRSTEDFQDKHLALVNHFVRGAQASFRLGRPTNMASSMIHLSVNELPPGVQAKALKEQDTQLYQPGEP-TSFSLGMRCVLARARVKDSEEFGDGGSSTCQFLMR----------------------------------DAYSQAFSSHSKRKACLSVFDIIKGGYHSVSQEKRSEKGVIENENGRIAFGAKFNKGRTHLVGS------------------------------------DELLEMNPRK---RENEDHLCPPEFKQRNEAIVDELVEEN--------------------------------KLAKDLCRMKCKDVYGKDVAITRCLLPRYFKNKKALENSTCGVVVNHTKHEKCEGAYAVMAVIGRKVMRRLLEKE 415
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D7FVQ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ8_ECTSI) HSP 1 Score: 266 bits (680), Expect = 1.850e-70 Identity = 172/337 (51.04%), Postives = 214/337 (63.50%), Query Frame = 3 Query: 1758 EENSSAEDGGGGSGSGGYVPSDASEGSESGDXXXXXXXXXDDFSDTEEGPLRCEKCEADFDADSLRECALCNELYCQDCLECDPHGEEISCSGCRSEGNDSDDGEFESDRAATD-----VDSDHGSASGKSKRRR----KKNLGPPRTSSPREPFVVPKDDEQAELMGRLYRNAREMGRHLKKDNKRVKETRNLTLLDLTDTAINFKSERREPIRKDIWRKLEKEDYGLYGITVRQAGASGETISGTTVTSKKFRTGEVVEAKMEEGYNVFMIEWSDGKGNARSAYTTREVLCYRDDGQGVVSLDEANACMRLFMLAALCMVNTQVHQFIDNDSKVE 2741
++NS ED G Y PS+A + D D+ S T G RCE CE DF + L EC N YCQDC +E +CS C+ +D G+F S TD D++ GS SG SKRRR KK+ PRTSSPRE +VPKDD+QA+LM LYR AREM R L +NKR+KE RNLTLLDLT+ A + P+R++IWRK EKE+Y LYGITVR+AG +GETI GT VTS K R GEVVEAKM+EGY VF +EWS+GK N RSAY+T +VL RDD QGV +L+EA M +F+LA LC+VN QV++FI ++K+E
Sbjct: 463 DKNSDLEDSG-------YAPSEAGDT----DGDNDEDTTSDECSSTG-GETRCEGCEEDFYCE-LVECPTYNAQYCQDCENDLSSDKERTCSRCQ-RADDDGVGDF-STGGVTDGPDEYTDTESGSVSGNSKRRRRSAGKKDNCIPRTSSPRELLMVPKDDQQAKLMLSLYRKAREMERKLAGENKRIKEVRNLTLLDLTEAASCLA--KGSPVREEIWRKCEKENYALYGITVRRAGPTGETIPGTKVTSDKGRRGEVVEAKMDEGYTVFTVEWSEGKSNRRSAYSTEDVLRTRDDNQGVATLEEAKEKMGVFLLATLCVVNVQVYRFITKNTKLE 782
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D8LPN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPN8_ECTSI) HSP 1 Score: 213 bits (542), Expect = 3.690e-59 Identity = 112/189 (59.26%), Postives = 130/189 (68.78%), Query Frame = 3 Query: 108 KVMYAPGGAKYTVVDVAAGG-LCGLLAPIALKLFKAGIPVEDIASAVKGNLTDDMKEYARSLRGKVVEKSRDHYTFVDDMPEYEGGGEESLDFADVACNPNYVILTREMWELVMQFPTGWLDGRAVLIVGEVLHLDGLRIVTHKNGILDPCDAGGPLPREHCPMVLHDNYGHFQALVPFHEASESEASG 671
+VM P G KY VVDVA C +LAPIAL +F+ IP+EDI S+V GNLTDDM +Y +LRGKVVE SR ++F D GEE DF DV NP +VI+ R MWE VM G DGRA L++G+VL LDG+RIV H NGIL PCD G PLP HCPMVLHD YGHF+AL+ F E SESEASG
Sbjct: 3 RVMSTPEGVKYRVVDVAGRDRCCEILAPIALNMFRENIPLEDIVSSVSGNLTDDMMKYVPTLRGKVVEMSRVFFSFAD--------GEELADFDDVVDNPMWVIMARGMWEKVMLCFRGQFDGRAFLLMGKVLPLDGIRIVKHDNGILAPCDVGVPLPSGHCPMVLHDGYGHFKALLHFRETSESEASG 183
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D8LK60_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK60_ECTSI) HSP 1 Score: 223 bits (568), Expect = 1.660e-57 Identity = 260/797 (32.62%), Postives = 322/797 (40.40%), Query Frame = 3 Query: 108 KVMYAPGGAKYTVVDVAAGGLCGLLAPIALKLFKAGIPVEDIASAVKGNLTDDMKEYARSLRGKVVEKSRDHYTFVDDMPEYEGGGEESLDFADVACNPNYVILTREMWELVMQFPTGWLDGRAVLIVGEVLHLDGLRIVTHKNGILDPCDAGGPLPREHCPMVLHDNYGHFQALVPFHE-------------------------------ASESEASGSTD--------VEXXXXXXXXXXXXXXXXXXGEDSAAPDLXXXXXXXXXXXXSGDT---PRRYHDWSDDEFYGDDKTWLNQTAQLW-DGWSFVGNKKGVARTRSETRRVFPQAT-LRDFASQNKCEPLFLPDEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAQTGPARICICRFAGGRRFRPAKTRGYRAFPVSMAGGGFVWARGSGRNEGDLLVLDDDSARLFELALSLIRGGGNPGEAQGRAKRKRGPPTGVFAASFVPNDIPSARTDDGESAGDGERSGEGSCDVGGGADEESXXXXXXXXXXXXXXXXXXXXXXXXXXDFCEENSSAEDGGGGSGSGGYVPSDASEGSESGDXXXXXXXXXDDFSDTEEGPLRCEKCEADFDADSLRECALCNELYCQDCLECDPHGEEISCSGCRSEGNDSDDGEFESDRAATD-----VDSDHGSASGKSKRRR----KKNLGPPRTSSPREPFVVPKDDEQAELMGRLYRNAREMGRHLKKDNKRVKETRNLTLLDLTDTA 2339
+V + GA+Y +DV GGLC LL IA+ + AG P E+I +AV G LTDDMKEY +SLR V D + F D GEE F D+ +P +VI+TR MWELV PTG+LDGRAV ++ + L L G RIV H++G L PCDAGGP+ E CPM+LHD YGHF+AL+P S+SE S TD V+ DL T +R H W DDE++ DD + + + DGW+ VG K+G R ET F +A+ L D S NKC+PLFL ++E T + A + G E + + ++SAR E XXXXXXXXXXXXXXXX +ENS ED G Y PS+A + DXXXXXXXXX + S T G RCE CE DF + L EC CN YCQDC +E +CS C+ +D G+F S TD D+D GS SG SKRRR KK+ PRTSSPRE +VPKDD+QAELM LYR AREM R L +NKR+ E RNLTLLDLT+ A
Sbjct: 28 RVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDAAGTPCEEIFAAVSGKLTDDMKEYVQSLR--AVSTCGDQFAFKD--------GEELASFDDIVHDPMWVIVTRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVPCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFEMEEGYHLLLDEGFVDGTDEEEAVPGTSDSETSDGTDEVPESAVVVDVAGTEASDGGSTPCAESSDSGGGDSDLGARGAFGENAEVKAATRVSSKRSHPWDDDEYWDDDANYYSGCTIVGEDGWTLVG-KEG-RRMGLETSLAFDEASGLYDLTSPNKCQPLFLDHDDE---------------------------------------------------------------------------TDENEAAEVDEAVDEVGEXXXXXXXXXXXXXXXEAG-------------EEERSRVTNNSARESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------------------XXXXXXXXXXXXXXXXVASAGDENSDLEDSG-------YAPSEAGDT----DXXXXXXXXXXECSSTG-GETRCEGCEEDFYCE-LVECPTCNAQYCQDCENDLSSDKERTCSRCQ-RADDDGVGDFSSG-GVTDGPDKYTDTDSGSVSGNSKRRRRSAGKKHNRIPRTSSPRESLMVPKDDQQAELMFSLYRKAREMERKLAGENKRINEVRNLTLLDLTEAA 665
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE) HSP 1 Score: 218 bits (555), Expect = 3.030e-53 Identity = 156/424 (36.79%), Postives = 226/424 (53.30%), Query Frame = 1 Query: 2905 ESSCFQMMGLDAYSKISLKGLVDSEEDFNPKSLAFVNHFVRGAQASFRLGRATNFAASTIHLS-------------VNELPPGVKLTTLEEKR-FCVFNPGESMTKYSLGMRCVLAGARVKDSGDDSTGESSTCQFLMRFPLYRLLDISRVDGLA-LCPTTEHSSCVSPTLRHGDAYSQAFSIHNTLDEDLKVFNQIKKAYHRVSREKRSEKSIVENENEKVAFGVKWAKGRSHLVGGAECMNGYLLLEELVTRNGIESFMDRLPD---KDAVVKMCNEVL-EMNPAKIGSHKNEDHFYPKDFQNKIKEVVDHLIDQEVFSRSDISLFSCALTVMDSVLTAALRKQDTLGQLARNLHRLKCRDVHGKDIAITRCLLPKYFKNKKALENSTCGVVVNHTKDEKCAGAYAVMAVIGRRVMRRLLDD 4119
+ S F +GLD Y + G V + F+ + + FVNHFVRGAQ+S++LGR T+ + LS V+EL V L E K+ C +P E +K LG R +LA ARV G S ++ PLYR ++ +R + L + PTTE+++ VS T RH Y A I +T D+DL+V N I AY V+ +KR+E + EN ++ G K KGR+ + + + L +LV NGI+ M ++ D + V++MC +VL + A IG +E H YP+ ++ +I EVV L V S D+ FSCAL ++DS+ +A LR QD+LG LA K +G+ + + LP KN + L S G+VVNH KDE+ G +AVM VIGRR+M L +
Sbjct: 940 DGSLFMALGLDRYRATNTTGFVTNGYRFHDRHMTFVNHFVRGAQSSWKLGRPTSVESCIAPLSAGVATDKLSAGGAVDELSEEVDLPNYETKQTICTISP-EDASKCGLGTRLLLARARVSTGH----GVSDCFKWWAHCPLYRQIEFTRPEHLGDIQPTTENTTRVSQTRRHRPFYKSAVEISSTKDQDLRVLNSIFDAYDPVASDKRNEANAHENSLSRLGNGSKVDKGRTFSI--EDWKDKCKFLADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEEQIDEVVGVLAKAGV-STEDLERFSCALHILDSLTSACLRPQDSLGCLA-----CKAYVKNGRLVFV----LPPVGKNSRTLVKSVIGMVVNHAKDERTTGPFAVMLVIGRRLMTMHLQE 1346
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D7FGY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGY2_ECTSI) HSP 1 Score: 205 bits (522), Expect = 1.520e-51 Identity = 254/778 (32.65%), Postives = 316/778 (40.62%), Query Frame = 3 Query: 108 KVMYAPGGAKYTVVDVAAGGLCGLLAPIALKLFKAGIPVEDIASAVKGNLTDDMKEYARSLRGKVVEKSRDHYTFVDDMPEYEGGGEESLDFADVACNPNYVILTREMWELVMQFPTGWLDGRAVLIVGEVLHLDGLRIVTHKNGILDPCDAGGPLPREHCPMVLHDNYGHFQALVP-------------FHEASESEASGSTDVEXXXXXXXXXXXXXXXXXXGEDSAAPDLXXXXXXXXXXXXS--------GDTP------------------------RRYHDWSDDEFYGDDKTWLNQTAQLW-DGWSFVGNKKGVARTRSETRRVFPQAT-LRDFASQNKCEPLFLPDEEEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAQTGPARICICRFAGGRRFRPAKTRGYRAFPVSMAGGGFVWARGSGRNEGDLLVLDDDSARLFELALSLIRGGGNPGEAQGRAKRKRGPPTGVFAASFVPNDIPSARTDDGESAGDGERSGEGSCDVGGGADEESXXXXXXXXXXXXXXXXXXXXXXXXXXDFCEENSSAEDGGGGSGSGGYVPSDASEGSESGDXXXXXXXXXDDFSDTEEGPLRCEKCEADFDADSLRECALCNELYCQDCLECDPHGEEISCSGCRSEGNDSDDGEFESDRAATD-----VDSDHGSASGKSKRRR----KKNLGPPRTSSPREPFVVPKDDEQAELMGRLYRNAREMGRHL 2273
+V + GA+Y +DV GLC LL IA+ + G P E+I AV G LTD M EY +SLR +V D + F D GEE F D+ +P +VI TR MWELV PTG+LDGRAV ++ + L L G RIV H++G L CDAGGP+ E CPM+LHD YGHF+AL+P +H E TD E E + A D+ S GD+ +R W D+E++ DD + + + DGW+ VG K+G R ET F +A+ L D S NKC+PLFL ++E T A V A V G A E E QGR KR R P GVFA + P+ P+AR D + + XXXXXXXXXXXXXXXXXXXXXXXXXX +SA D GY PS+A + D D+ S T G RCE CE DF + L EC CN YCQDC +E + S C+ +D G+F S TD D++ GS SG SKRRR KK+ PRTSSPRE +VPKDD+QA+LM LYR AREM R L
Sbjct: 28 RVYFTTKGAQYMALDVGGVGLCALLGVIAVAMDDVGTPCEEIFEAVSGELTDVMTEYVQSLRANIVSTCGDQFAFKD--------GEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIPLRRMPLEFQINQEYHLLLEESFVDVTDEEEAVPGTSDLETSDGTDEVPESAVAVDVAGTEASDGGSMPSAQSSGSGGGDSDLGARGAFGEDAEGEEVKAATRVSSKRSQPWDDNEYWDDDANYYSGCTIVGEDGWTLVG-KEG-RRMGLETTLAFDEASGLYDLTSPNKCQPLFLDHDDE---------------------------------------------------------------------------------------------------TDENEAAEVDEA----VDEVGEXXXXXXXXXXXXXXAEAGE-------------ETQGRPKRDRRPAGGVFAPGWAPDPAPNARNDSARESEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVASAGDKNSDLEDSGYAPSEAGDT----DGDNDEDTTSDECSSTG-GETRCEGCEEDFYCE-LVECPTCNAKYCQDCENDLSSDKERTYSRCQ-RADDDGVGDF-STGGVTDGPDEYTDTESGSVSGNSKRRRRSAGKKDNCIPRTSSPRELLMVPKDDQQAKLMLSLYRKAREMERKL 671
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D7FKZ5_ECTSI (PHD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ5_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.470e-49 Identity = 154/461 (33.41%), Postives = 235/461 (50.98%), Query Frame = 1 Query: 2785 RRYAWDEMKKTSVKAMDMLMDKEKQFLDSREDESLLAEMEES-SCFQMMGLDAYSKISLKGLVDSEEDFNPKSLAFVNHFVRGAQASFRLGRATNFAASTIHLSVN----ELPPGVKLTTLEEKRFCVFNPGESMTKYSLGMRCVLAGARVKDSGDDSTGESSTCQFLMRFPLYRLLDISRVDGLALCPT-TEHSSCVSPTLRHGDAYSQAFSIHNTLDEDLKVFNQIKKAYHRVSREKRSEKSIVENENEKVAFGVKWAKGRSHLVGGAECMNGYLLLEELVTRNGIESFMDRLPD----KDAVVKMCNEVLEMNPAK-------IGSHKNEDHFYPKDFQNKIKEVVDHLIDQEVFSRSDISLFSCALTVMDSVLTAALRKQDTLGQLARNLHRLKCRDVHGKDIAITRCLLPKYFKNKKALENSTCGVVVNHTKDEKCAGAYAVMAVIGRRVMRRLLD 4116
R+ A++E++ V + + E + L+S D L+ ++E++ S F M+GLD + GLV E+F+ + + F NHF+RGAQ +++LGR T+F + + +S ELP + + + + V N + + LG+R +L ARV + ES +++ FPLYR+ +R D + TE++S S T + + T +D V QI + Y V+ KRS+ S EN ++V G K+ GR L GAE L + V + I FMDR+ + +D VVKMC EVLE +G +EDH YP ++ +I VV D V SD++ FS L ++DS+ A LR QD LG LA ++ V G + +LP KN +AL+ S G+VV H K ++ G YAVM VIGRR+MR+ L+
Sbjct: 1012 RKTAYEEIQ--DVSSASTMTPYEIKILESPSDPELVRDLEKAGSFFTMLGLDGFKDTQELGLVYVREEFHKRQVEFANHFIRGAQVAWKLGRPTSFESCLVPVSAGGVYTELPSEINCASCDRENTVVTNTCQQARECGLGVRALLVKARV------GSVESGCYKWMKHFPLYRVFVDTRPDRIGKINVGTENTSHASQTRKDAALLKTGVDVSATSSQDRAVLKQIGEKYKEVANVKRSDASDYENGLKRVGNGQKYDNGR--LARGAEWKKDLKFLGDSVEESVIAPFMDRIGEDAEGRDEVVKMCMEVLEDKSDATHNKNRYLGKRLDEDHLYPDSYRAQIDAVVGMFWDSGV-DASDLASFSQGLQILDSLTAACLRPQDWLGCLASQVY------VKGTRLIF---VLPPECKNSEALKKSDIGLVVTHAKSDRTKGPYAVMMVIGRRLMRKHLE 1452
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D7FR94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR94_ECTSI) HSP 1 Score: 173 bits (439), Expect = 2.000e-45 Identity = 86/177 (48.59%), Postives = 110/177 (62.15%), Query Frame = 3 Query: 108 KVMYAPGGAKYTVVDVAAGGLCGLLAPIALKLFKAGIPVEDIASAVKGNLTDDMKEYARSLRGKVVEKSRDHYTFVDDMPEYEGGGEESLDFADVACNPNYVILTREMWELVMQFPTGWLDGRAVLIVGEVLHLDGLRIVTHKNGILDPCDAGGPLPREHCPMVLHDNYGHFQALVP 638
+V + GA+Y +DV GGLC LL IA+ + G P E+I A+ G LTD M EY +SLR +V D + F D GEE F D+ +P +VI TR MWELV PTG+LDGRAV ++ + L L G RIV H++G L CDAGGP+ E CPM+LHD YGHF+AL+P
Sbjct: 15 RVYFTTEGAQYMALDVGGGGLCALLGVIAVAMDDVGTPCEEIFEAISGELTDVMTEYVQSLRANIVSTCGDQFAFKD--------GEELASFDDIVHDPMWVIATRAMWELVTLHPTGYLDGRAVWLLAKFLGLHGFRIVKHEDGHLVSCDAGGPISSEECPMMLHDGYGHFKALIP 183
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Match: D7FZH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH0_ECTSI) HSP 1 Score: 166 bits (421), Expect = 1.190e-37 Identity = 123/277 (44.40%), Postives = 157/277 (56.68%), Query Frame = 3 Query: 1959 CALCNELYCQDCLECDPHGEEISCSGCRSEGNDS------DDGEFESDRAATDVDSDH--GSASG-----KSKRRRKKNLGP-PRTSSPREPFVVPKDDEQAELMGRLYRNAREMGRHLKKDNKRVKETRNLTLLDLTDTAINFKSERREPIRKDIWRKLEKEDYGLYGITVRQAGASGETISGTTVTSKKFRTGEVVEAKMEEGYNVFMIEWSDGKGNARSAYTTREVLCYRDDGQGVVSLDEANACMRLFMLAALCMVNTQVHQFIDNDSKVENA 2747
C C EL+ +D L G E+ C+GC E +D D G E D +DV+ D G+ SG KSK+ R++ +T S E VVPKDDEQAE + Y A E R L K + E RNLT LD+T + ++ P+ +DIWRKLEKEDYGLYGIT R+ E +SGT VTS + GEVV A+ +GYN F IEWSD + S Y T +VL RDDGQGVVSL EA + F+ +A CM + Q H+FI N+ KV +A
Sbjct: 793 CVGCGELFDRDQLA--SLGNELRCAGCLEEESDERAGSVGDAGAVEGD-PESDVNGDTCTGATSGVPASKKSKQCRRQVCNRLHKTCSQNEALVVPKDDEQAERIFANYNEANEHERKLTASKKTINEVRNLTYLDITRASTCL--DKGLPVGEDIWRKLEKEDYGLYGITTRR-----EEVSGTKVTSANNK-GEVVVARRVKGYNTFTIEWSDSR-KKNSEYKTGDVLRDRDDGQGVVSLGEATRRIERFLRSARCMADVQFHEFITNNVKVHDA 1057 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.601.1 >prot_C-linearis_contig10.601.1 ID=prot_C-linearis_contig10.601.1|Name=mRNA_C-linearis_contig10.601.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=896bp MSVSICKVMYAPGGAKYTVVDVAAGGLCGLLAPIALKLFKAGIPVEDIASback to top mRNA from alignment at C-linearis_contig10:2795238..2803664- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.601.1 ID=mRNA_C-linearis_contig10.601.1|Name=mRNA_C-linearis_contig10.601.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8427bp|location=Sequence derived from alignment at C-linearis_contig10:2795238..2803664- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2795238..2803664- >mRNA_C-linearis_contig10.601.1 ID=mRNA_C-linearis_contig10.601.1|Name=mRNA_C-linearis_contig10.601.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5376bp|location=Sequence derived from alignment at C-linearis_contig10:2795238..2803664- (Chordaria linearis ClinC8C monoicous)back to top |