mRNA_C-linearis_contig10.568.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig10.568.1
Unique NamemRNA_C-linearis_contig10.568.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: D7G8N5_ECTSI (Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N5_ECTSI)

HSP 1 Score: 866 bits (2238), Expect = 2.540e-307
Identity = 464/595 (77.98%), Postives = 497/595 (83.53%), Query Frame = 1
Query:  256 MSRIAARAAAAAARGHASS-WRFPTLQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEP----------------APVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            MSR+A R A AAARG+ASS  RFP L G LDVPAKTALES+ AM  +VD+LRS L  VEAGGGD+ARKRH  +GKLLARERIEA+VDPG+PFLELAPLAG+        D GI  GG VAGIGRVEG+ECMI+ANDAT+KGG Y+PITVKKHLRAQEVA+ENRLPCIY+VDSGGAFLPKQA+VFPDK+HFGRIFFNQANMSAAGI QVAVVMG+CTAGGAYVPAMSDETVIVNGTGTVFLAGPP  +             G+D   R+SGVADHFA+DDE AISI RSI+AN NL +  N +   +A  A                          + WDEPLFDPREMGSIIP D KKPFDVRKVIARL+DGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRG PIIFLQNITGFMVGKRYEHQGIAKDGAKLV AV+CA VPKITCVIGGSYGAGNYGMCGR+YSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRE  GETL EE EAKIKDPIL KFERESSPYYSSSRLWDDGVIDPADTRKVLGL+L VATKDA+PPTSFGVFRM
Sbjct:    1 MSRLA-RGARAAARGYASSSMRFPKLNGDLDVPAKTALESRLAMQEMVDELRSALATVEAGGGDLARKRHSAKGKLLARERIEAIVDPGSPFLELAPLAGY--------DEGIISGGAVAGIGRVEGVECMILANDATIKGGTYYPITVKKHLRAQEVAQENRLPCIYLVDSGGAFLPKQAEVFPDKEHFGRIFFNQANMSAAGIPQVAVVMGICTAGGAYVPAMSDETVIVNGTGTVFLAGPPTRQ-------------GSD---RLSGVADHFAEDDEDAISIARSIVANFNLPSATNPSQRVAAMNAAXXXXXXXXXXXXXXXXXXGATTAAEQQWDEPLFDPREMGSIIPTDSKKPFDVRKVIARLVDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRERSGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPPTSFGVFRM 570          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A835Z7I2_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I2_9STRA)

HSP 1 Score: 744 bits (1922), Expect = 2.680e-260
Identity = 380/536 (70.90%), Postives = 438/536 (81.72%), Query Frame = 1
Query:  382 MAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            M ALV  L  +L     GGG+ A +RHKGRGKLLARERIEA++D GTPFLEL+PLAG + S+ G DD  +  GGVV G+G V G++C+IVANDATVKGG Y+PITVKKHLRAQEVA  N LPC+Y+VDSGGAFLP QADVFPD+DHFGRIF+NQANMSAAG+ QVAVVMG CTAGGAYVPAMSDETVIV GTGT+FL GPPLV+AATGE ++AE+LGGAD H  +SGVADH+A+DD HA+ I R I+A LN       A  ASA AA            +DEPL+ P +MG+++P DPK+PFDVRKV+AR+LDGSRF EFK R+GTT+VTGFGHLYGQ VGIVANNGVLFSESALKAAHFVELCCQRG P++FLQNITGFMVG+++E++GIAK GAK+VTAVACA VPKITCVIGGSYGAGNYGMCGRS SPRFLFMWPNARI VMG EQAANVL QVEKDKR ++G  LS E EA +K P+L +   ESS YYSS+RLWDDGVIDP DTR+VLG+S+  A +    PT FGVFRM
Sbjct:    1 MDALVADLNRRLAKAMQGGGEAAIRRHKGRGKLLARERIEAVLDAGTPFLELSPLAGGD-SMYGKDD--VAAGGVVTGVGVVSGVKCVIVANDATVKGGTYYPITVKKHLRAQEVALANALPCLYLVDSGGAFLPMQADVFPDRDHFGRIFYNQANMSAAGVPQVAVVMGSCTAGGAYVPAMSDETVIVRGTGTIFLGGPPLVKAATGEEVAAEDLGGADVHCSISGVADHYAEDDAHALEIARGIVAGLNA----PGAAAASAAAA------------YDEPLYGPHDMGAVVPVDPKRPFDVRKVLARVLDGSRFSEFKARFGTTIVTGFGHLYGQQVGIVANNGVLFSESALKAAHFVELCCQRGVPLVFLQNITGFMVGRKHENEGIAKHGAKMVTAVACAKVPKITCVIGGSYGAGNYGMCGRSMSPRFLFMWPNARIGVMGAEQAANVLTQVEKDKRAAKGLALSPEEEAAMKAPLLSRLGAESSAYYSSARLWDDGVIDPRDTRRVLGMSVAAAMQAPPEPTKFGVFRM 517          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A024TF50_9STRA (Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024TF50_9STRA)

HSP 1 Score: 738 bits (1905), Expect = 5.380e-257
Identity = 366/554 (66.06%), Postives = 440/554 (79.42%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L G ++  +K  +ES   M  L  +L+++L +V  GGG+ AR +H  RGKLLAR+RI++LVDPG+ FLEL+PLA H+   T      +P  G++ GIGR+ G+ECMI+ANDATVKGG YFP+TVKKHLRAQE+ARENRLPCIYMVDSGGA+LP QA++FPDK+HFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++AEELGGAD H R SGV DH A++D HAI I R I++NLN  +  NA  T S    +             EP+FDP E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF  LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR  P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CANVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMGGEQAA VLA V++D  E  G+T S E EA  K P L+K+E ESS YYSS+RLWDDG+IDP DTRKVLGLS   A  +   PT FGVFRM
Sbjct:   28 LDGKINTKSKDFVESIERMNTLTSELKTRLDVVRLGGGEAARSKHVARGKLLARDRIDSLVDPGSAFLELSPLAAHDMYGT-----PVPAAGIITGIGRIHGVECMILANDATVKGGTYFPMTVKKHLRAQEIARENRLPCIYMVDSGGAYLPLQAEIFPDKEHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVQGNGTVFLGGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKNDAHAIEIVRRIVSNLNWTSKANANVTQSLTEVE-------------EPVFDPAELGGIIPVDGRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCANVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNMERAGKTWSAEEEAAFKQPTLDKYEVESSAYYSSARLWDDGIIDPKDTRKVLGLSFSAALNELPTPTKFGVFRM 563          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A485LV68_9STRA (Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV68_9STRA)

HSP 1 Score: 724 bits (1870), Expect = 3.460e-251
Identity = 358/554 (64.62%), Postives = 434/554 (78.34%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L G ++  +K  L+S   M  L  +L+S+L +V  GGG+ AR +H  RGK+L R+RI++L+DPG+PFLEL+PLA ++   T      +P  G+V GIGR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+ARENRLPC+YMVDSGGAFLP QA++FPDK+HFGR F+NQA MSAAGI Q+AVVMG CTAGGAYVPAM DE+VIV G GTVFLAGPPLV+AATGEV++AEELGGAD H R SGV DH A+DD HAI I R I++NLN         T                   +EP FDP E+G +IP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF  LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR  P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA+VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMGGEQAA VLA V++D  E  G+T S+E EA  K P L+K+E ESS YYS++RLWDDG+IDP DTRKVLGLS   A  +   PT FGVFRM
Sbjct:   65 LDGKINAKSKDFLDSMERMNGLTSELKSRLDVVRLGGGESARAKHVSRGKMLVRDRIDSLIDPGSPFLELSPLAAYDMYGT-----SVPAAGIVTGIGRINGVECMILGNDATVKGGTYFPMTVKKHLRAQEIARENRLPCVYMVDSGGAFLPLQAEIFPDKEHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQGNGTVFLAGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKDDAHAIDIVRRIVSNLNWQKTPAQTLTLV-----------------EEPRFDPAELGGLIPVDARKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCASVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNLERAGKTWSDEDEAAFKKPTLDKYEVESSSYYSTARLWDDGIIDPKDTRKVLGLSFSAALNETPSPTKFGVFRM 596          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A8K1CHG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG8_PYTOL)

HSP 1 Score: 722 bits (1864), Expect = 1.180e-250
Identity = 366/554 (66.06%), Postives = 434/554 (78.34%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L G L+  ++   ES   M AL  +LRS++  V  GGG+ AR+RH  RGKLL R+RI++L+DPG+PFLE+APLA ++  + GGD   +P  G+V GIGRV G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLP QA++FPD+DHFGR FFNQANMSA GI Q+AVVMG CTAGGAYVPAM DE+VIV   GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN             PA        V   P +EPL+ P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D  E  G+T S+E E   K P LEK+E ESS YYS++RLWDDG+IDP DTRK+LGLSL  A  +    T FGVFRM
Sbjct:   41 LDGKLNTKSEQFQESMAHMEALTQELRSRIAKVRLGGGEKARERHMSRGKLLVRDRIDSLLDPGSPFLEIAPLAAYD--MYGGD---VPAAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPLQAEIFPDRDHFGREFFNQANMSAQGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHLAHNDHHALEITRRIVSNLNY---------QKHPA--------VTQVPIEEPLYSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNIERAGKTWSQEEEDAFKKPTLEKYEHESSAYYSTARLWDDGIIDPKDTRKILGLSLSAALNEEPKETKFGVFRM 572          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: K3X1F2_GLOUD (Methylcrotonoyl-CoA carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1F2_GLOUD)

HSP 1 Score: 719 bits (1856), Expect = 7.720e-250
Identity = 362/554 (65.34%), Postives = 436/554 (78.70%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L G L+  ++   ES   M AL  +L++++  +  GGG+ AR RH  RGKLL R+RI++L+D  +PFLEL+PLA ++       DG +P  G+V GIGR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPC+Y+VDSGGAFLPKQAD+FPD+DHFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR II+NLN         T     A     AP+     +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D  E  G+T + E EA  K P L+K+E+ESS Y+S++RLWDDG+IDP DTRKVLGLSL  A  + +  T FGVFRM
Sbjct:   16 LDGKLNTKSEQFKESLVHMDALTAELKARVAKIRLGGGEKARDRHVSRGKLLVRDRIDSLLDRDSPFLELSPLAAYDMY-----DGQVPSAGIVTGIGRINGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCVYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHFANNDHHALEITRRIISNLNY--------TKQPSVAQ----API-----EEPLFSPEELGGIIPVDARKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFAKLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNLERAGKTWTAEEEAAFKQPTLDKYEKESSAYFSTARLWDDGIIDPKDTRKVLGLSLSAALNEHAQETKFGVFRM 547          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A662XVW0_9STRA (Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XVW0_9STRA)

HSP 1 Score: 718 bits (1853), Expect = 4.520e-249
Identity = 362/554 (65.34%), Postives = 429/554 (77.44%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L GAL+V +K   ES+  M AL  +LR ++     GGG+ AR RH  RGK+  R+RI+ L+D G+PFLEL+PLA           GG+P  G+V GIGR+ G+ECMI+ANDATVKGG YFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QAD+FPD+DHFGR F+NQANMSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR I++NLN     +   T                 P +EPLF P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG T+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AVA A VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D  + R E+ S E EA  K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL  A  +    T FGVFRM
Sbjct:   36 LDGALNVKSKEFRESQARMEALTAELRERVAAARQGGGESARARHVMRGKMPVRDRIDTLLDAGSPFLELSPLAADGVY-----KGGVPAAGIVTGIGRISGVECMILANDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTGEELGGADVHCRTSGVTDHFANNDAHALDITRRIVSNLNYRKQPSVTQT-----------------PIEEPLFSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKQLYGPTVVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGVPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYDRRNESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 567          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: M4BBK0_HYAAE (Methylcrotonoyl-CoA carboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBK0_HYAAE)

HSP 1 Score: 716 bits (1848), Expect = 2.580e-248
Identity = 361/554 (65.16%), Postives = 428/554 (77.26%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L GALD  +    ES+  MA L  +LR ++     GG  V R RH+ R K+  R+RI++L+DPG+PFLEL+PLA  +       D  +P  G+V GIGR+ GLECMIV NDATVKGG YFP+TVKKHLRAQE+A  NRLPC+Y+VDSGGAFLP Q D+FPD+DHFGR+F+NQA MSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G+GTVFL GPPLV+AATGEVI+ EELGGAD H R SGV DH+A +D HA++ITR I++NLN     +A                V   P +EPL+ P E+G IIP D +KPFD+RKVIAR++DGSRF EFK+ YG T+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELCCQRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AVA A VPKITCVIGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D  E R ET S+E EA  K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL  A  +    T FGVFRM
Sbjct:   35 LDGALDTKSSQFQESQAHMATLTTELRERVTTARQGGSAVTRARHEARHKMFVRDRIDSLLDPGSPFLELSPLAACDMY-----DNSVPSAGIVTGIGRISGLECMIVGNDATVKGGTYFPLTVKKHLRAQEIALANRLPCLYLVDSGGAFLPLQDDIFPDRDHFGRVFYNQATMSAQGIPQLAVVMGSCTAGGAYVPAMSDESVIVKGSGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALAITRRIVSNLNYNRTQSA----------------VTQTPIEEPLYSPDELGGIIPMDARKPFDIRKVIARIVDGSRFDEFKKEYGATIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCCQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCVIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSDEDEAAFKQPILDKYEVESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPQETKFGVFRM 567          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: H3G9Y1_PHYRM (Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9Y1_PHYRM)

HSP 1 Score: 714 bits (1844), Expect = 8.970e-248
Identity = 358/554 (64.62%), Postives = 432/554 (77.98%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L GAL+V +    ES   MA L  +LR ++     GGG+ AR RH+ RGK+  R+RI++L+DPG+PFLEL+PLA ++        GG+P  G+V G+GR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QAD+FPD++HFGR F+NQA MSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH+A +D HA+ ITR I++NLN             PA        V   P +EPL+ P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG+T+VTGF  LYG  VGIVANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AV+ A VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D  E R E+ S E EA  K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL  A  +    T FGVFRM
Sbjct:   32 LDGALNVKSAQFQESLAHMAKLTSELRERVAHARQGGGEAARARHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMY-----GGGVPSAGIVTGVGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDREHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNY---------RKQPA--------VTQTPIEEPLYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGSTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 563          
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A2D4C3P9_PYTIN (Methylcrotonoyl-CoA carboxylase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3P9_PYTIN)

HSP 1 Score: 724 bits (1868), Expect = 4.740e-246
Identity = 364/554 (65.70%), Postives = 435/554 (78.52%), Query Frame = 1
Query:  328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
            L G ++  ++   ES   M  L  +L+ ++  V  GGG  AR+RH+ RGKL  R+RI+ L+DPG+PFLE+APLA ++  + GG+   +P  G+V GIGRV G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLPKQAD+FPD+DHFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAM DE+VIV   GTVFL GPPLVRAATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN+    +   T                 P +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF  LYG  VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAANVLAQV++D  E  G+T S+E EA  K PIL+K+E ESS Y+S++RLWDDG+IDP DTRKVLGLSL  A  +    T FGVFRM
Sbjct:  391 LDGKINTKSEQFQESMAQMEQLTAELKQRIARVRQGGGPKARERHESRGKLFVRDRIDTLLDPGSPFLEIAPLAAYD--MYGGE---VPSAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVRAATGEVVTPEELGGADVHCRTSGVTDHLAHNDFHALEITRRIVSNLNVQRQPSVTQT-----------------PIEEPLFSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAANVLAQVQRDNLERAGKTWSDEDEAAFKQPILDKYEHESSAYFSTARLWDDGIIDPRDTRKVLGLSLSAALNEQPKETKFGVFRM 922          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8N5_ECTSI2.540e-30777.98Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus... [more]
A0A835Z7I2_9STRA2.680e-26070.90Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema ... [more]
A0A024TF50_9STRA5.380e-25766.06Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyc... [more]
A0A485LV68_9STRA3.460e-25164.62Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyce... [more]
A0A8K1CHG8_PYTOL1.180e-25066.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3X1F2_GLOUD7.720e-25065.34Methylcrotonoyl-CoA carboxylase n=1 Tax=Globispora... [more]
A0A662XVW0_9STRA4.520e-24965.34Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronospo... [more]
M4BBK0_HYAAE2.580e-24865.16Methylcrotonoyl-CoA carboxylase n=1 Tax=Hyaloperon... [more]
H3G9Y1_PHYRM8.970e-24864.62Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronospo... [more]
A0A2D4C3P9_PYTIN4.740e-24665.70Methylcrotonoyl-CoA carboxylase n=2 Tax=Pythium in... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig10contigC-linearis_contig10:2455395..2461916 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score875.5
Seed ortholog evalue1.3e-251
Seed eggNOG ortholog2880.D7G8N5
KEGG rclassRC00367,RC00942
KEGG koko:K01969
KEGG ReactionR04138
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.CoA carboxylase activity
EggNOG OGsCOG4799@1,KOG0540@2759
EC6.4.1.4
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size2786
Cds size1737
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927341.8125827-UTR-C-linearis_contig10:2455394..24556491622927341.8125827-UTR-C-linearis_contig10:2455394..2455649Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2455395..2455649 +
1690879638.6881142-UTR-C-linearis_contig10:2455394..24556491690879638.6881142-UTR-C-linearis_contig10:2455394..2455649Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2455395..2455649 +
1622927341.913869-UTR-C-linearis_contig10:2461122..24619161622927341.913869-UTR-C-linearis_contig10:2461122..2461916Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2461123..2461916 +
1690879638.7750814-UTR-C-linearis_contig10:2461122..24619161690879638.7750814-UTR-C-linearis_contig10:2461122..2461916Chordaria linearis ClinC8C monoicousUTRC-linearis_contig10 2461123..2461916 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927341.822619-CDS-C-linearis_contig10:2455649..24561141622927341.822619-CDS-C-linearis_contig10:2455649..2456114Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2455650..2456114 +
1690879638.7019303-CDS-C-linearis_contig10:2455649..24561141690879638.7019303-CDS-C-linearis_contig10:2455649..2456114Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2455650..2456114 +
1622927341.837201-CDS-C-linearis_contig10:2456556..24566981622927341.837201-CDS-C-linearis_contig10:2456556..2456698Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2456557..2456698 +
1690879638.7123446-CDS-C-linearis_contig10:2456556..24566981690879638.7123446-CDS-C-linearis_contig10:2456556..2456698Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2456557..2456698 +
1622927341.8485706-CDS-C-linearis_contig10:2456899..24570891622927341.8485706-CDS-C-linearis_contig10:2456899..2457089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2456900..2457089 +
1690879638.7229698-CDS-C-linearis_contig10:2456899..24570891690879638.7229698-CDS-C-linearis_contig10:2456899..2457089Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2456900..2457089 +
1622927341.8622003-CDS-C-linearis_contig10:2458019..24582661622927341.8622003-CDS-C-linearis_contig10:2458019..2458266Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2458020..2458266 +
1690879638.7318554-CDS-C-linearis_contig10:2458019..24582661690879638.7318554-CDS-C-linearis_contig10:2458019..2458266Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2458020..2458266 +
1622927341.875166-CDS-C-linearis_contig10:2458668..24588931622927341.875166-CDS-C-linearis_contig10:2458668..2458893Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2458669..2458893 +
1690879638.745333-CDS-C-linearis_contig10:2458668..24588931690879638.745333-CDS-C-linearis_contig10:2458668..2458893Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2458669..2458893 +
1622927341.8884418-CDS-C-linearis_contig10:2459696..24599241622927341.8884418-CDS-C-linearis_contig10:2459696..2459924Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2459697..2459924 +
1690879638.7534378-CDS-C-linearis_contig10:2459696..24599241690879638.7534378-CDS-C-linearis_contig10:2459696..2459924Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2459697..2459924 +
1622927341.9017305-CDS-C-linearis_contig10:2460882..24611221622927341.9017305-CDS-C-linearis_contig10:2460882..2461122Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2460883..2461122 +
1690879638.7647498-CDS-C-linearis_contig10:2460882..24611221690879638.7647498-CDS-C-linearis_contig10:2460882..2461122Chordaria linearis ClinC8C monoicousCDSC-linearis_contig10 2460883..2461122 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig10.568.1prot_C-linearis_contig10.568.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig10 2455650..2461122 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig10.568.1

>prot_C-linearis_contig10.568.1 ID=prot_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=579bp
MSRIAARAAAAAARGHASSWRFPTLQGALDVPAKTALESKNAMAALVDQL
RSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGH
EASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKK
HLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMS
AAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATG
EVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNA
AGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVI
ARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAA
HFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVP
KITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQV
EKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPA
DTRKVLGLSLRVATKDASPPTSFGVFRM*
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mRNA from alignment at C-linearis_contig10:2455395..2461916+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig10.568.1 ID=mRNA_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6522bp|location=Sequence derived from alignment at C-linearis_contig10:2455395..2461916+ (Chordaria linearis ClinC8C monoicous)
CTCACGGACGGCTCACTCGCACACTCCATCTTTTCGCCCCTAGCCACGGC ACCCTCATTCCTTCTTGGTCTGCTCGCCTCTCGCTTTTGTGCACCCTCCA GAGGTATTTGGTGTAGAATACCACAGCAGAGAACGTTCCTTCTTCAACTT GAGAGTCAGAGAAGAAGCGTTCGCGATCCTCCGCAGGAAGAGAGAGAGAG CGAGACATCGACGCCCCAGCTTTGTGCCCAAGCGAAGGAGGATAGACACC GGACAATGTCAAGAATTGCAGCAAGAGCAGCGGCAGCAGCCGCAAGGGGG CATGCTTCGTCGTGGCGCTTCCCCACGCTCCAGGGTGCCCTTGACGTCCC CGCCAAGACGGCTCTCGAAAGCAAGAACGCGATGGCGGCGCTGGTGGACC AGCTTCGCTCAAAGCTCAAGATCGTGGAGGCCGGGGGCGGGGACGTCGCC AGAAAAAGGCACAAGGGCAGGGGCAAGCTTCTCGCACGAGAGAGAATCGA GGCACTAGTGGATCCGGGCACGCCGTTCCTGGAGCTCGCGCCTCTCGCGG GGCACGAGGCTTCAGTTACCGGAGGCGACGATGGCGGAATCCCTGGCGGA GGAGTCGTTGCAGGCATCGGGAGGGTGGAAGGCCTCGAGTGCATGATCGT GGCCAACGACGCCACCGTCAAGGGGGGCGCCTACTTTCCCATCACTGTGA AGAAGCACTTGAGGGCTCAGGTCAGTGTGAATGAAAAATGGGGGAAGAAA TCTGGCAGCTTTGATTGGGTGTCCATATGTACAGCAGCAGCAGCCCTATG CACCTATGTACCTACGTGCATGTTGTTTTGTGATCTGCGCCGTTCCTTCC AGCAAGCGTATTTTGGTTGCATTTTGCACTGCTCGAGTGAGACACCTGCT ATACCTAGGTCAGCGAACTTTGCTTTGGCCGGCACCTACAAGTCTCTAGG TATACCCCTCTAGACTACGGTACCCCTCTCCCTCTGCGATGCCCCAGATC TTCCGTTCTGCCCCCCCCTTACACGCGATGCCTAATTGTTCCCAGCACAC GCACTTCACTTGTTCTGCTCCCTCTGCATGCCTAAATCTACGAAGCGCAT GCGTCTTGCCTTTTCCCTCGCGATGCCTGCAACCACCGCGTCCCCTCGGC GCACACGCACAGGAAGTTGCCCGTGAGAATCGGCTGCCGTGCATCTACAT GGTCGATAGCGGCGGGGCTTTCCTCCCCAAGCAGGCGGATGTTTTCCCCG ACAAGGACCACTTCGGCAGAATCTTCTTCAACCAGGCGAACATGTCCGCG GCAGGTACGATCGACCACGGCGGCGCACCCACAAGCGCACACACGTACGA AGAACATAACTTGGACCGGTAAATTGCACTCCGTCAACTGGTAACCACCA CTCTTGGAAGTCAAGTGCAAGCACACGCAGGAAAAAGAATAAATCAAGCG AGACCACGAAAACGACACGGATCGGTGTGGCGACCCGCGTTTGCTTTTGC GGCAGGGATCTCGCAGGTTGCGGTTGTCATGGGAGTCTGCACGGCCGGCG GGGCCTATGTGCCGGCGATGTCCGACGAGACCGTCATCGTCAACGGAACC GGGACCGTATTCCTGGCCGGCCCGCCGCTCGTGAGAGCCGCGACCGGCGA GGTGATCTCAGCCGAAGAGCTGGGAGGGGCCGATGCGCACACGAGGTGGG GTGTAGGAAGGGTGGGAAGGGGGGTAGGGAACAACGGAACACTGGTAAGG AGGAGTAGACGAGGCCTGGCAGGCGTTGGATGTGTAGAGAGTGCATACAT AGAGCGGGGGGAGAGGGAGAAAGAGGTGAGCAGTCGGGTGTGTGACGCGG CTGTTTCTTTAATGGGGGGAATGGAGGAAGAGAGGCAAGGATTTGCCTCT TTGAGGGGGGGTTCTTTCTTTGATGCCGTTTTGATTTATAAAAGAGGCAA GCAGGCTATTTACGGTAGGTATACCACGGGGTACGACCGCGAGGTTAAGT CGGTAGAGGGAGATGCGCGGTTGAAAGGTCAGGCCAGACGGCGATGGGAT GGGGAAGAAAGAAGGGGATTAGTCTCTGTTTTTCGGAAGGGAGCTGGAGG GAGAAAGACGCGACACGTTTTGGGCTTGGCTGCAGTGTAGGAGCGGGGAA GGGAGGCCGGGAAGAAAGTACACGTAGCACCTAATGGACGACTGCGATTG AGAAGCGCTTGATCGGCGGTCCTTCCTATGAATAGAACCCTGGGCACCGT GGCTCTGAGTGTTTCTGCAGCGCTACATGAAGGCTGCCAAAAAAAGTGTT TGGGCGCTGTAGCTCTCGGTCGCTGGCAACATTAGTGCGCTGGAACCGGC CAGAAGTGGTATGTATCTCTGCTGCTCGCTGTTCCTGGGTTCATCGTCTT GACTTTTTGTCAAAAAGCGAAGCGTGCAAACACGCGATCCTGATGGCACG GCAGCACCGTTCACACAGCACACATCATCGGCCTCGTTCCCGCGCGGGTT GCTGCTTACCCCACTCAAGAATACGTTTCTCCCTATCGCAGCGCCGCTGA CACCGCCCCCCACCCACCTACCTACCGTGGTAAAAACATCTTGTGTTGTT GTGTCGTGTCTCATACCGTGGCCAGGGTATCGGGCGTGGCCGATCATTTC GCCCAAGACGACGAGCACGCCATCTCGATCACCCGCAGCATCATCGCGAA CCTCAACCTCGGGACTGTTGGGAACGCCGCTGGCACCGCGTCGGCGCCGG CTGCCGACGACGACGAGCCGGCACCGGTCCCGCCGCGACCGTGGGATGAG CCGCTCTTCGACCCCAGAGAAATGGGAAGCATTATCCCCGCAGACCCGAA AAAGCCGTTCGACGTGCGAAAGGCGAGTTGCGCTCATGACCCATCCTGGA ACACCGTAGATTGCGGCGGGTGGGACACGACTGAAGGAATGGGTTTGACC CGACGAGCAATGAAACGGACGCTCTTTGTTCTGGTGTAGCCTTGCTGTGC GCTTGGTTTTATGGCGACGGCTTCCCCCTCCCTCCCGAACCACACAACCT CAAGCGGTGCGATACTAAAAGGCATGACGAACCCGTTACCCGTTCTTCCT GCCTGTCGGCTTGGGTTTAGGCGCGATTATAGCGCGTCTGGTTTGCAAGA CCCGCGCGCTCTCGCCGCCTTGCCTAAACCCTCTTTCTGAACACGCACAT CTCAAACCCCAAACCCCCGGACGCCCGATGCCCTCTGTTCTTGTGGCTAT TCTTCCTTCTCTCCCACCGAGTAGGTCATTGCGCGGCTCCTCGATGGCAG CCGTTTCCACGAGTTTAAGGAGCGGTACGGGACGACGATGGTAACGGGCT TCGGCCACCTTTACGGGCAGAGCGTGGGTATCGTGGCCAACAACGGGGTG CTCTTCTCAGAGTCGGCCTTGAAGGCGGCGCACTTCGTTGAGCTGTGCTG CCAGAGGGGCACCCCGATAATCTTCCTGCAGAACATCACGGGCTTCATGG TGGGTGGGTGTGGGCGGGCGGGCGGCTGGTCGGCTTTGGTTTGTCGCGCG GGCTTGGCGGGGCGTGCTGCCTCGTCGTGTTTCTTTTGTCGTCGCAGATG TGCTGGGCCCAGGTACGTGGGTGTGTCGTGGGTTGGTTGGTGTTCACGTG TGCGGCGGGTCAGGATTGTTTTTCGCTTTGTGGGACCCCGTGTAATCTGT CGCATTGAGGTGCTGTTGTGGTGCCACAGAGCAATGCTCTTCCGCCGGAA GCAGGAGCGCCTGTGGCTTGGGAACTGTCGGCACCGTCGTGAGATGCCCT CAGCTTGGACTGTCGTCCAGCCTTGAGTTACCTGCCCAGTGTCACGTAGG CCTTCGTTCTCTCCCGTTGCTTCGCACAGACTACCATGGTGATATTTTCA CAATCTGTGTGCATTGGCCGAACGCCAAGAAAGCAGTTCTACACCCCAGC CATCACCGTGTCGGGAGCTTACCATACCACGAATAAACCTACTCCTACGA CGCAGCCGTATTTGCTTGAACGCAAGCGCACACGGGTGCTGGAAGTCCAC CCTAGAGGAGCGGAAGCATGGATGCTTCTCGATGTTTGTCGTGCGGACCC GCTGAACAGCTCGCGGCCATTCGTGACTTTTGCAAACACCAGCCCTCCCC GGGCCGTTGAAGCCCGATATTTACCCGCAGATACACTTCTCCCCAACACG GTAGGGGCGCAAGGGTTTAACGCAGCACGCTTACGGTCTGACGCATGATG TACATACCGAACGGAAATGCTGCACCCCCCTCTTCCCTCGCGGGAAAAAT AGGTCGGAAAGCGCTACGAGCACCAAGGCATCGCCAAGGACGGCGCAAAG CTCGTGACGGCCGTCGCCTGCGCGAACGTGCCCAAGATCACGTGCGTCAT CGGCGGGAGCTACGGGGCCGGGAACTACGGCATGTGCGGCCGGTCGTACT CGCCTCGCTTCCTCTTCATGTGGCCGAACGCGCGCATCTCGGTAATGGGC GGAGAGCAGGCCGCGAACGTTCTGGCTCAGGTGTGTGTTTGTGTGCGTGT GTGCGTGTGTGTGCTCTCTTTTTTAGCATCGACCACGATGACAGGCTGAC CAATGAACAGACGTCAGCATGGAGCGGTCCATAAAACGTAACAATGTTTT CCTAGGTGTTGGGACCCCCGGATTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTCTTCACATTAAACTCGTTACAGTTGCTAATCCCTAAAATCTAGCAAG ATCACAGCCCGTGGCCACAAAAGTGTTAAGAGCCATCAGAGAATCCTTAA GAACACGCACACTTTTAGCAGGGAAAGGGTACACAAGCCCGAAGAGGTAC ACCTTAAATACCTACAGCAAGTTATGCGTGTCCAATCTAAACTTGGGGGT TCTAAAAAAACGTCGACTGAACGGCAAGGTTATGCGTCATGTTCTCACAA GGCAACATGTACGCACTCCCAAAAACTTCCTTAGCGCTATCTCTATCTCC TATATTCCTCCTGCGCATCTTTTTGGGCGTGGTGTGTGTGCGTGTGTGTC TGTCTCTCTCTCTCTCTCTCGCTCTGTGTGTGTGTGCGTTTGTGTAATGC GAGGAAAACCAGGCAATCCCGCGAGCAGTTGTTGTCGAATCCTTGCGGGT TGATCTAGACTAAACGGTTTTCTTCGCCTTTTCGTACTCCGTATGATTTA GTCACCTTTTGTTTTTGCATGTACAGCACACAGTTTCGAGTGTACAGCAC ACATGCCAACCTGTATATTTACTTGACGTACAAGCAAGTATCCGAAGGAC TACATGTAGGATTCGTATCGGTCGCTGGTTTTGCGCGTGCGTGCGGCCAT GAGCGACCAATTTGTTTTCGCCGTCGCTGGACTCCGCGCGTATTTATCGC AACCAATTTTAGCAGCAAGAAAACAAAACATCGCTCGTTGCACTTCAGAA GCTCACGCCAACAATGTTGGATCCCGAACCGTACGCAGGTGGAAAAAGAC AAACGAGAAAGCCGCGGAGAGACTCTGAGCGAGGAAGCCGAGGCCAAGAT CAAGGACCCGATCCTGGAAAAGTTCGAGCGGGAGAGCTCCCCGTACTACT CGAGCTCGCGCCTGTGGGACGACGGCGTTATCGACCCGGCCGACACTAGG AAAGTGCTGGGGCTGAGCCTGCGCGTGGCGACCAAGGACGCGTCTCCGCC CACGTCGTTTGGGGTGTTCAGGATGTAAATGCCAGGATGAAAATTTCAGG ATGAAAATGTCAGGATGTTGGTTGGGATCCGACAATGTGAACGTTCGTTC AGGGTGTAAAAATTCGGTGGGATCGATGACAGTAGTTTGAAGGCGCTGCC GTTGACTGGTCGGTTGGATCCGACCACGCTCGTCTCAGAAAATGGCTGCG ACGTTGGTTTGAAGGGTCCCGTCTTGTGCGGTTTGGATGGGTGGACTTGA CCGTGTTCATTTAGTTCAGGATACTTTCGGTCTGTTGGATGCGGTCATGT GTTGTACATACAATACTGTACTTCAGGAGGAACATTTTTGTTTCACGCAA TGGCTAAACAACCTATTCGACAGGATACTTTCGGTCTGTTGGATGCGGTC ATGTGTTGTACATACAATACTGTACTTCAGGATGAACATTTTTGTTTCAC GCAATGGCTAAACAACCTATTCGATATGTACAAAAACTTGGTGAAAGGGT GCAGTCACGTGTTGTATTGTAATTAAATTTGCTGTGTACAGCGGGACTGG GGGTGCTTTTCTGTGTTAAACCGTACGTATTGCCGCGAGCAAACGAAGTG GAAAATGTGCTTGTACGAAAGGGTACGCGTGCTGGTTCCTACATCTGATG GCGAAGAAGTGCGGGGATTAGTCTAGGCCTTGAGATGCGGCCAATGGCGC AATTCACCATGTGCGGGGCGCTACTGCGTTGCTGCTGCGATCGCTCCTTA GAGCACGTTGTGGCGTCTTTGGGGACAGCTCGGCAGATGGCAGATGGGTG CCACCCTGCGCGCTCATTGTGA
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Coding sequence (CDS) from alignment at C-linearis_contig10:2455395..2461916+

>mRNA_C-linearis_contig10.568.1 ID=mRNA_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3474bp|location=Sequence derived from alignment at C-linearis_contig10:2455395..2461916+ (Chordaria linearis ClinC8C monoicous)
ATGTCAAGAATTGCAGCAAGAGCAGCGGCAGCAGCCGCAAGGGGGCATGC
TTCGTCGTGGCGCTTCCCCACGCTCCAGGGTGCCCTTGACGTCCCCGCCA
AGACGGCTCTCGAAAGCAAGAACGCGATGGCGGCGCTGGTGGACCAGCTT
CGCTCAAAGCTCAAGATCGTGGAGGCCGGGGGCGGGGACGTCGCCAGAAA
AAGGCACAAGGGCAGGGGCAAGCTTCTCGCACGAGAGAGAATCGAGGCAC
TAGTGGATCCGGGCACGCCGTTCCTGGAGCTCGCGCCTCTCGCGGGGCAC
GAGGCTTCAGTTACCGGAGGCGACGATGGCGGAATCCCTGGCGGAGGAGT
CGTTGCAGGCATCGGGAGGGTGGAAGGCCTCGAGTGCATGATCGTGGCCA
ACGACGCCACCGTCAAGGGGGGCGCCTACTTTCCCATCACTGTGAAGAAG
CACTTGAGGGCTCAGATGTCAAGAATTGCAGCAAGAGCAGCGGCAGCAGC
CGCAAGGGGGCATGCTTCGTCGTGGCGCTTCCCCACGCTCCAGGGTGCCC
TTGACGTCCCCGCCAAGACGGCTCTCGAAAGCAAGAACGCGATGGCGGCG
CTGGTGGACCAGCTTCGCTCAAAGCTCAAGATCGTGGAGGCCGGGGGCGG
GGACGTCGCCAGAAAAAGGCACAAGGGCAGGGGCAAGCTTCTCGCACGAG
AGAGAATCGAGGCACTAGTGGATCCGGGCACGCCGTTCCTGGAGCTCGCG
CCTCTCGCGGGGCACGAGGCTTCAGTTACCGGAGGCGACGATGGCGGAAT
CCCTGGCGGAGGAGTCGTTGCAGGCATCGGGAGGGTGGAAGGCCTCGAGT
GCATGATCGTGGCCAACGACGCCACCGTCAAGGGGGGCGCCTACTTTCCC
ATCACTGTGAAGAAGCACTTGAGGGCTCAGGAAGTTGCCCGTGAGAATCG
GCTGCCGTGCATCTACATGGTCGATAGCGGCGGGGCTTTCCTCCCCAAGC
AGGCGGATGTTTTCCCCGACAAGGACCACTTCGGCAGAATCTTCTTCAAC
CAGGCGAACATGTCCGCGGCAGGAAGTTGCCCGTGAGAATCGGCTGCCGT
GCATCTACATGGTCGATAGCGGCGGGGCTTTCCTCCCCAAGCAGGCGGAT
GTTTTCCCCGACAAGGACCACTTCGGCAGAATCTTCTTCAACCAGGCGAA
CATGTCCGCGGCAGGGATCTCGCAGGTTGCGGTTGTCATGGGAGTCTGCA
CGGCCGGCGGGGCCTATGTGCCGGCGATGTCCGACGAGACCGTCATCGTC
AACGGAACCGGGACCGTATTCCTGGCCGGCCCGCCGCTCGTGAGAGCCGC
GACCGGCGAGGTGATCTCAGCCGAAGAGCTGGGAGGGGCCGATGCGCACA
CGAGGGATCTCGCAGGTTGCGGTTGTCATGGGAGTCTGCACGGCCGGCGG
GGCCTATGTGCCGGCGATGTCCGACGAGACCGTCATCGTCAACGGAACCG
GGACCGTATTCCTGGCCGGCCCGCCGCTCGTGAGAGCCGCGACCGGCGAG
GTGATCTCAGCCGAAGAGCTGGGAGGGGCCGATGCGCACACGAGGGTATC
GGGCGTGGCCGATCATTTCGCCCAAGACGACGAGCACGCCATCTCGATCA
CCCGCAGCATCATCGCGAACCTCAACCTCGGGACTGTTGGGAACGCCGCT
GGCACCGCGTCGGCGCCGGCTGCCGACGACGACGAGCCGGCACCGGTCCC
GCCGCGACCGTGGGATGAGCCGCTCTTCGACCCCAGAGAAATGGGAAGCA
TTATCCCCGCAGACCCGAAAAAGCCGTTCGACGTGCGAAAGGGTATCGGG
CGTGGCCGATCATTTCGCCCAAGACGACGAGCACGCCATCTCGATCACCC
GCAGCATCATCGCGAACCTCAACCTCGGGACTGTTGGGAACGCCGCTGGC
ACCGCGTCGGCGCCGGCTGCCGACGACGACGAGCCGGCACCGGTCCCGCC
GCGACCGTGGGATGAGCCGCTCTTCGACCCCAGAGAAATGGGAAGCATTA
TCCCCGCAGACCCGAAAAAGCCGTTCGACGTGCGAAAGGTCATTGCGCGG
CTCCTCGATGGCAGCCGTTTCCACGAGTTTAAGGAGCGGTACGGGACGAC
GATGGTAACGGGCTTCGGCCACCTTTACGGGCAGAGCGTGGGTATCGTGG
CCAACAACGGGGTGCTCTTCTCAGAGTCGGCCTTGAAGGCGGCGCACTTC
GTTGAGCTGTGCTGCCAGAGGGGCACCCCGATAATCTTCCTGCAGAACAT
CACGGGCTTCATGGTCATTGCGCGGCTCCTCGATGGCAGCCGTTTCCACG
AGTTTAAGGAGCGGTACGGGACGACGATGGTAACGGGCTTCGGCCACCTT
TACGGGCAGAGCGTGGGTATCGTGGCCAACAACGGGGTGCTCTTCTCAGA
GTCGGCCTTGAAGGCGGCGCACTTCGTTGAGCTGTGCTGCCAGAGGGGCA
CCCCGATAATCTTCCTGCAGAACATCACGGGCTTCATGGTCGGAAAGCGC
TACGAGCACCAAGGCATCGCCAAGGACGGCGCAAAGCTCGTGACGGCCGT
CGCCTGCGCGAACGTGCCCAAGATCACGTGCGTCATCGGCGGGAGCTACG
GGGCCGGGAACTACGGCATGTGCGGCCGGTCGTACTCGCCTCGCTTCCTC
TTCATGTGGCCGAACGCGCGCATCTCGGTAATGGGCGGAGAGCAGGCCGC
GAACGTTCTGGCTCAGGTCGGAAAGCGCTACGAGCACCAAGGCATCGCCA
AGGACGGCGCAAAGCTCGTGACGGCCGTCGCCTGCGCGAACGTGCCCAAG
ATCACGTGCGTCATCGGCGGGAGCTACGGGGCCGGGAACTACGGCATGTG
CGGCCGGTCGTACTCGCCTCGCTTCCTCTTCATGTGGCCGAACGCGCGCA
TCTCGGTAATGGGCGGAGAGCAGGCCGCGAACGTTCTGGCTCAGGTGGAA
AAAGACAAACGAGAAAGCCGCGGAGAGACTCTGAGCGAGGAAGCCGAGGC
CAAGATCAAGGACCCGATCCTGGAAAAGTTCGAGCGGGAGAGCTCCCCGT
ACTACTCGAGCTCGCGCCTGTGGGACGACGGCGTTATCGACCCGGCCGAC
ACTAGGAAAGTGCTGGGGCTGAGCCTGCGCGTGGCGACCAAGGACGCGTC
TCCGCCCACGTCGTTTGGGGTGTTCAGGATGTAAGTGGAAAAAGACAAAC
GAGAAAGCCGCGGAGAGACTCTGAGCGAGGAAGCCGAGGCCAAGATCAAG
GACCCGATCCTGGAAAAGTTCGAGCGGGAGAGCTCCCCGTACTACTCGAG
CTCGCGCCTGTGGGACGACGGCGTTATCGACCCGGCCGACACTAGGAAAG
TGCTGGGGCTGAGCCTGCGCGTGGCGACCAAGGACGCGTCTCCGCCCACG
TCGTTTGGGGTGTTCAGGATGTAA
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