mRNA_C-linearis_contig10.568.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: D7G8N5_ECTSI (Methylcrotonoyl-CoA carboxylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8N5_ECTSI) HSP 1 Score: 866 bits (2238), Expect = 2.540e-307 Identity = 464/595 (77.98%), Postives = 497/595 (83.53%), Query Frame = 1
Query: 256 MSRIAARAAAAAARGHASS-WRFPTLQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEP----------------APVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
MSR+A R A AAARG+ASS RFP L G LDVPAKTALES+ AM +VD+LRS L VEAGGGD+ARKRH +GKLLARERIEA+VDPG+PFLELAPLAG+ D GI GG VAGIGRVEG+ECMI+ANDAT+KGG Y+PITVKKHLRAQEVA+ENRLPCIY+VDSGGAFLPKQA+VFPDK+HFGRIFFNQANMSAAGI QVAVVMG+CTAGGAYVPAMSDETVIVNGTGTVFLAGPP + G+D R+SGVADHFA+DDE AISI RSI+AN NL + N + +A A + WDEPLFDPREMGSIIP D KKPFDVRKVIARL+DGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRG PIIFLQNITGFMVGKRYEHQGIAKDGAKLV AV+CA VPKITCVIGGSYGAGNYGMCGR+YSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRE GETL EE EAKIKDPIL KFERESSPYYSSSRLWDDGVIDPADTRKVLGL+L VATKDA+PPTSFGVFRM
Sbjct: 1 MSRLA-RGARAAARGYASSSMRFPKLNGDLDVPAKTALESRLAMQEMVDELRSALATVEAGGGDLARKRHSAKGKLLARERIEAIVDPGSPFLELAPLAGY--------DEGIISGGAVAGIGRVEGVECMILANDATIKGGTYYPITVKKHLRAQEVAQENRLPCIYLVDSGGAFLPKQAEVFPDKEHFGRIFFNQANMSAAGIPQVAVVMGICTAGGAYVPAMSDETVIVNGTGTVFLAGPPTRQ-------------GSD---RLSGVADHFAEDDEDAISIARSIVANFNLPSATNPSQRVAAMNAAXXXXXXXXXXXXXXXXXXGATTAAEQQWDEPLFDPREMGSIIPTDSKKPFDVRKVIARLVDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGIPIIFLQNITGFMVGKRYEHQGIAKDGAKLVAAVSCAKVPKITCVIGGSYGAGNYGMCGRAYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRERSGETLGEEEEAKIKDPILNKFERESSPYYSSSRLWDDGVIDPADTRKVLGLTLHVATKDAAPPTSFGVFRM 570
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A835Z7I2_9STRA (Methylcrotonoyl-CoA carboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7I2_9STRA) HSP 1 Score: 744 bits (1922), Expect = 2.680e-260 Identity = 380/536 (70.90%), Postives = 438/536 (81.72%), Query Frame = 1
Query: 382 MAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
M ALV L +L GGG+ A +RHKGRGKLLARERIEA++D GTPFLEL+PLAG + S+ G DD + GGVV G+G V G++C+IVANDATVKGG Y+PITVKKHLRAQEVA N LPC+Y+VDSGGAFLP QADVFPD+DHFGRIF+NQANMSAAG+ QVAVVMG CTAGGAYVPAMSDETVIV GTGT+FL GPPLV+AATGE ++AE+LGGAD H +SGVADH+A+DD HA+ I R I+A LN A ASA AA +DEPL+ P +MG+++P DPK+PFDVRKV+AR+LDGSRF EFK R+GTT+VTGFGHLYGQ VGIVANNGVLFSESALKAAHFVELCCQRG P++FLQNITGFMVG+++E++GIAK GAK+VTAVACA VPKITCVIGGSYGAGNYGMCGRS SPRFLFMWPNARI VMG EQAANVL QVEKDKR ++G LS E EA +K P+L + ESS YYSS+RLWDDGVIDP DTR+VLG+S+ A + PT FGVFRM
Sbjct: 1 MDALVADLNRRLAKAMQGGGEAAIRRHKGRGKLLARERIEAVLDAGTPFLELSPLAGGD-SMYGKDD--VAAGGVVTGVGVVSGVKCVIVANDATVKGGTYYPITVKKHLRAQEVALANALPCLYLVDSGGAFLPMQADVFPDRDHFGRIFYNQANMSAAGVPQVAVVMGSCTAGGAYVPAMSDETVIVRGTGTIFLGGPPLVKAATGEEVAAEDLGGADVHCSISGVADHYAEDDAHALEIARGIVAGLNA----PGAAAASAAAA------------YDEPLYGPHDMGAVVPVDPKRPFDVRKVLARVLDGSRFSEFKARFGTTIVTGFGHLYGQQVGIVANNGVLFSESALKAAHFVELCCQRGVPLVFLQNITGFMVGRKHENEGIAKHGAKMVTAVACAKVPKITCVIGGSYGAGNYGMCGRSMSPRFLFMWPNARIGVMGAEQAANVLTQVEKDKRAAKGLALSPEEEAAMKAPLLSRLGAESSAYYSSARLWDDGVIDPRDTRRVLGMSVAAAMQAPPEPTKFGVFRM 517
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A024TF50_9STRA (Methylcrotonoyl-CoA carboxylase n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024TF50_9STRA) HSP 1 Score: 738 bits (1905), Expect = 5.380e-257 Identity = 366/554 (66.06%), Postives = 440/554 (79.42%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L G ++ +K +ES M L +L+++L +V GGG+ AR +H RGKLLAR+RI++LVDPG+ FLEL+PLA H+ T +P G++ GIGR+ G+ECMI+ANDATVKGG YFP+TVKKHLRAQE+ARENRLPCIYMVDSGGA+LP QA++FPDK+HFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++AEELGGAD H R SGV DH A++D HAI I R I++NLN + NA T S + EP+FDP E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CANVPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMGGEQAA VLA V++D E G+T S E EA K P L+K+E ESS YYSS+RLWDDG+IDP DTRKVLGLS A + PT FGVFRM
Sbjct: 28 LDGKINTKSKDFVESIERMNTLTSELKTRLDVVRLGGGEAARSKHVARGKLLARDRIDSLVDPGSAFLELSPLAAHDMYGT-----PVPAAGIITGIGRIHGVECMILANDATVKGGTYFPMTVKKHLRAQEIARENRLPCIYMVDSGGAYLPLQAEIFPDKEHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVQGNGTVFLGGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKNDAHAIEIVRRIVSNLNWTSKANANVTQSLTEVE-------------EPVFDPAELGGIIPVDGRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCANVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNMERAGKTWSAEEEAAFKQPTLDKYEVESSAYYSSARLWDDGIIDPKDTRKVLGLSFSAALNELPTPTKFGVFRM 563
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A485LV68_9STRA (Methylcrotonoyl-CoA carboxylase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV68_9STRA) HSP 1 Score: 724 bits (1870), Expect = 3.460e-251 Identity = 358/554 (64.62%), Postives = 434/554 (78.34%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L G ++ +K L+S M L +L+S+L +V GGG+ AR +H RGK+L R+RI++L+DPG+PFLEL+PLA ++ T +P G+V GIGR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+ARENRLPC+YMVDSGGAFLP QA++FPDK+HFGR F+NQA MSAAGI Q+AVVMG CTAGGAYVPAM DE+VIV G GTVFLAGPPLV+AATGEV++AEELGGAD H R SGV DH A+DD HAI I R I++NLN T +EP FDP E+G +IP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF LYG+ +GI+ANNG+LFSES++KAAHF+ELCCQR P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA+VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNA+ISVMGGEQAA VLA V++D E G+T S+E EA K P L+K+E ESS YYS++RLWDDG+IDP DTRKVLGLS A + PT FGVFRM
Sbjct: 65 LDGKINAKSKDFLDSMERMNGLTSELKSRLDVVRLGGGESARAKHVSRGKMLVRDRIDSLIDPGSPFLELSPLAAYDMYGT-----SVPAAGIVTGIGRINGVECMILGNDATVKGGTYFPMTVKKHLRAQEIARENRLPCVYMVDSGGAFLPLQAEIFPDKEHFGREFYNQATMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQGNGTVFLAGPPLVKAATGEVVTAEELGGADVHCRTSGVTDHLAKDDAHAIDIVRRIVSNLNWQKTPAQTLTLV-----------------EEPRFDPAELGGLIPVDARKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGRPIGIIANNGILFSESSVKAAHFIELCCQRQIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCASVPKVTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNAKISVMGGEQAAGVLATVQRDNLERAGKTWSDEDEAAFKKPTLDKYEVESSSYYSTARLWDDGIIDPKDTRKVLGLSFSAALNETPSPTKFGVFRM 596
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A8K1CHG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHG8_PYTOL) HSP 1 Score: 722 bits (1864), Expect = 1.180e-250 Identity = 366/554 (66.06%), Postives = 434/554 (78.34%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L G L+ ++ ES M AL +LRS++ V GGG+ AR+RH RGKLL R+RI++L+DPG+PFLE+APLA ++ + GGD +P G+V GIGRV G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLP QA++FPD+DHFGR FFNQANMSA GI Q+AVVMG CTAGGAYVPAM DE+VIV GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN PA V P +EPL+ P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D E G+T S+E E K P LEK+E ESS YYS++RLWDDG+IDP DTRK+LGLSL A + T FGVFRM
Sbjct: 41 LDGKLNTKSEQFQESMAHMEALTQELRSRIAKVRLGGGEKARERHMSRGKLLVRDRIDSLLDPGSPFLEIAPLAAYD--MYGGD---VPAAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPLQAEIFPDRDHFGREFFNQANMSAQGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHLAHNDHHALEITRRIVSNLNY---------QKHPA--------VTQVPIEEPLYSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKQHYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNIERAGKTWSQEEEDAFKKPTLEKYEHESSAYYSTARLWDDGIIDPKDTRKILGLSLSAALNEEPKETKFGVFRM 572
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: K3X1F2_GLOUD (Methylcrotonoyl-CoA carboxylase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1F2_GLOUD) HSP 1 Score: 719 bits (1856), Expect = 7.720e-250 Identity = 362/554 (65.34%), Postives = 436/554 (78.70%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L G L+ ++ ES M AL +L++++ + GGG+ AR RH RGKLL R+RI++L+D +PFLEL+PLA ++ DG +P G+V GIGR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPC+Y+VDSGGAFLPKQAD+FPD+DHFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR II+NLN T A AP+ +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D E G+T + E EA K P L+K+E+ESS Y+S++RLWDDG+IDP DTRKVLGLSL A + + T FGVFRM
Sbjct: 16 LDGKLNTKSEQFKESLVHMDALTAELKARVAKIRLGGGEKARDRHVSRGKLLVRDRIDSLLDRDSPFLELSPLAAYDMY-----DGQVPSAGIVTGIGRINGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCVYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHFANNDHHALEITRRIISNLNY--------TKQPSVAQ----API-----EEPLFSPEELGGIIPVDARKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFAKLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNLERAGKTWTAEEEAAFKQPTLDKYEKESSAYFSTARLWDDGIIDPKDTRKVLGLSLSAALNEHAQETKFGVFRM 547
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A662XVW0_9STRA (Methylcrotonoyl-CoA carboxylase n=11 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XVW0_9STRA) HSP 1 Score: 718 bits (1853), Expect = 4.520e-249 Identity = 362/554 (65.34%), Postives = 429/554 (77.44%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L GAL+V +K ES+ M AL +LR ++ GGG+ AR RH RGK+ R+RI+ L+D G+PFLEL+PLA GG+P G+V GIGR+ G+ECMI+ANDATVKGG YFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QAD+FPD+DHFGR F+NQANMSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DHFA +D HA+ ITR I++NLN + T P +EPLF P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG T+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AVA A VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D + R E+ S E EA K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL A + T FGVFRM
Sbjct: 36 LDGALNVKSKEFRESQARMEALTAELRERVAAARQGGGESARARHVMRGKMPVRDRIDTLLDAGSPFLELSPLAADGVY-----KGGVPAAGIVTGIGRISGVECMILANDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDRDHFGREFYNQANMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTGEELGGADVHCRTSGVTDHFANNDAHALDITRRIVSNLNYRKQPSVTQT-----------------PIEEPLFSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKQLYGPTVVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCSQRGVPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYDRRNESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 567
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: M4BBK0_HYAAE (Methylcrotonoyl-CoA carboxylase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBK0_HYAAE) HSP 1 Score: 716 bits (1848), Expect = 2.580e-248 Identity = 361/554 (65.16%), Postives = 428/554 (77.26%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L GALD + ES+ MA L +LR ++ GG V R RH+ R K+ R+RI++L+DPG+PFLEL+PLA + D +P G+V GIGR+ GLECMIV NDATVKGG YFP+TVKKHLRAQE+A NRLPC+Y+VDSGGAFLP Q D+FPD+DHFGR+F+NQA MSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G+GTVFL GPPLV+AATGEVI+ EELGGAD H R SGV DH+A +D HA++ITR I++NLN +A V P +EPL+ P E+G IIP D +KPFD+RKVIAR++DGSRF EFK+ YG T+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELCCQRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AVA A VPKITCVIGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D E R ET S+E EA K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL A + T FGVFRM
Sbjct: 35 LDGALDTKSSQFQESQAHMATLTTELRERVTTARQGGSAVTRARHEARHKMFVRDRIDSLLDPGSPFLELSPLAACDMY-----DNSVPSAGIVTGIGRISGLECMIVGNDATVKGGTYFPLTVKKHLRAQEIALANRLPCLYLVDSGGAFLPLQDDIFPDRDHFGRVFYNQATMSAQGIPQLAVVMGSCTAGGAYVPAMSDESVIVKGSGTVFLGGPPLVKAATGEVITPEELGGADVHCRTSGVTDHYANNDAHALAITRRIVSNLNYNRTQSA----------------VTQTPIEEPLYSPDELGGIIPMDARKPFDIRKVIARIVDGSRFDEFKKEYGATIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCCQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVANAKVPKITCVIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKETWSDEDEAAFKQPILDKYEVESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPQETKFGVFRM 567
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: H3G9Y1_PHYRM (Methylcrotonoyl-CoA carboxylase n=22 Tax=Peronosporaceae TaxID=4777 RepID=H3G9Y1_PHYRM) HSP 1 Score: 714 bits (1844), Expect = 8.970e-248 Identity = 358/554 (64.62%), Postives = 432/554 (77.98%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L GAL+V + ES MA L +LR ++ GGG+ AR RH+ RGK+ R+RI++L+DPG+PFLEL+PLA ++ GG+P G+V G+GR+ G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A+ENRLPC+Y+VDSGGAFLP QAD+FPD++HFGR F+NQA MSA GI Q+AVVMG CTAGGAYVPAMSDE+VIV G GTVFL GPPLV+AATGEV++ EELGGAD H R SGV DH+A +D HA+ ITR I++NLN PA V P +EPL+ P E+G +IP D +KPFDVRKVIAR++DGSRF EFK+ YG+T+VTGF LYG VGIVANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAK+V AV+ A VPK+TC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAA VLAQV++D E R E+ S E EA K PIL+K+E ESS YYS++RLWDDG+IDP DTRKVLGLSL A + T FGVFRM
Sbjct: 32 LDGALNVKSAQFQESLAHMAKLTSELRERVAHARQGGGEAARARHESRGKMPVRDRIDSLLDPGSPFLELSPLAAYDMY-----GGGVPSAGIVTGVGRINGVECMILGNDATVKGGTYFPLTVKKHLRAQEIAQENRLPCVYLVDSGGAFLPLQADIFPDREHFGREFYNQATMSAMGIPQIAVVMGSCTAGGAYVPAMSDESVIVKGNGTVFLGGPPLVKAATGEVVTPEELGGADVHCRTSGVTDHYANNDAHALDITRRIVSNLNY---------RKQPA--------VTQTPIEEPLYSPDELGGVIPVDSRKPFDVRKVIARIVDGSRFDEFKKEYGSTIVTGFARLYGNPVGIVANNGILFSESSVKAAHFIELCSQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKMVMAVSNAKVPKLTCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAAGVLAQVQRDNYERRKESWSAEEEAAFKQPILDKYEHESSAYYSTARLWDDGIIDPKDTRKVLGLSLSAALNEEPKETKFGVFRM 563
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Match: A0A2D4C3P9_PYTIN (Methylcrotonoyl-CoA carboxylase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C3P9_PYTIN) HSP 1 Score: 724 bits (1868), Expect = 4.740e-246 Identity = 364/554 (65.70%), Postives = 435/554 (78.52%), Query Frame = 1
Query: 328 LQGALDVPAKTALESKNAMAALVDQLRSKLKIVEAGGGDVARKRHKGRGKLLARERIEALVDPGTPFLELAPLAGHEASVTGGDDGGIPGGGVVAGIGRVEGLECMIVANDATVKGGAYFPITVKKHLRAQEVARENRLPCIYMVDSGGAFLPKQADVFPDKDHFGRIFFNQANMSAAGISQVAVVMGVCTAGGAYVPAMSDETVIVNGTGTVFLAGPPLVRAATGEVISAEELGGADAHTRVSGVADHFAQDDEHAISITRSIIANLNLGTVGNAAGTASAPAADDDEPAPVPPRPWDEPLFDPREMGSIIPADPKKPFDVRKVIARLLDGSRFHEFKERYGTTMVTGFGHLYGQSVGIVANNGVLFSESALKAAHFVELCCQRGTPIIFLQNITGFMVGKRYEHQGIAKDGAKLVTAVACANVPKITCVIGGSYGAGNYGMCGRSYSPRFLFMWPNARISVMGGEQAANVLAQVEKDKRESRGETLSEEAEAKIKDPILEKFERESSPYYSSSRLWDDGVIDPADTRKVLGLSLRVATKDASPPTSFGVFRM 1989
L G ++ ++ ES M L +L+ ++ V GGG AR+RH+ RGKL R+RI+ L+DPG+PFLE+APLA ++ + GG+ +P G+V GIGRV G+ECMI+ NDATVKGG YFP+TVKKHLRAQE+A ENRLPCIY+VDSGGAFLPKQAD+FPD+DHFGR F+NQANMSAAGI Q+AVVMG CTAGGAYVPAM DE+VIV GTVFL GPPLVRAATGEV++ EELGGAD H R SGV DH A +D HA+ ITR I++NLN+ + T P +EPLF P E+G IIP D +KPFDVRKVIAR++DGS+F EFK+ YGTT+VTGF LYG VGI+ANNG+LFSES++KAAHF+ELC QRG P++FLQNITGFMVGK+ EH GIAKDGAKLVTAV+CA VPKITC+IGGSYGAGNYGMCGR++SPRFL+MWPNARISVMGGEQAANVLAQV++D E G+T S+E EA K PIL+K+E ESS Y+S++RLWDDG+IDP DTRKVLGLSL A + T FGVFRM
Sbjct: 391 LDGKINTKSEQFQESMAQMEQLTAELKQRIARVRQGGGPKARERHESRGKLFVRDRIDTLLDPGSPFLEIAPLAAYD--MYGGE---VPSAGIVTGIGRVNGIECMILGNDATVKGGTYFPLTVKKHLRAQEIAMENRLPCIYLVDSGGAFLPKQADIFPDRDHFGREFYNQANMSAAGIPQIAVVMGSCTAGGAYVPAMCDESVIVQKNGTVFLGGPPLVRAATGEVVTPEELGGADVHCRTSGVTDHLAHNDFHALEITRRIVSNLNVQRQPSVTQT-----------------PIEEPLFSPEELGGIIPVDSRKPFDVRKVIARIVDGSKFDEFKKYYGTTIVTGFARLYGNPVGIIANNGILFSESSVKAAHFIELCTQRGIPLLFLQNITGFMVGKKAEHGGIAKDGAKLVTAVSCAKVPKITCIIGGSYGAGNYGMCGRAFSPRFLYMWPNARISVMGGEQAANVLAQVQRDNLERAGKTWSDEDEAAFKQPILDKYEHESSAYFSTARLWDDGIIDPRDTRKVLGLSLSAALNEQPKETKFGVFRM 922 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.568.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.568.1 >prot_C-linearis_contig10.568.1 ID=prot_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=579bp MSRIAARAAAAAARGHASSWRFPTLQGALDVPAKTALESKNAMAALVDQLback to top mRNA from alignment at C-linearis_contig10:2455395..2461916+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.568.1 ID=mRNA_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=6522bp|location=Sequence derived from alignment at C-linearis_contig10:2455395..2461916+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2455395..2461916+ >mRNA_C-linearis_contig10.568.1 ID=mRNA_C-linearis_contig10.568.1|Name=mRNA_C-linearis_contig10.568.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3474bp|location=Sequence derived from alignment at C-linearis_contig10:2455395..2461916+ (Chordaria linearis ClinC8C monoicous)back to top |