Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 1 |
Model size | 406 |
Cds size | 402 |
Stop | 0 |
Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927326.0291514-CDS-C-linearis_contig10:2407064..2407466 | 1622927326.0291514-CDS-C-linearis_contig10:2407064..2407466 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2407065..2407466 + |
1690879627.8053954-CDS-C-linearis_contig10:2407064..2407466 | 1690879627.8053954-CDS-C-linearis_contig10:2407064..2407466 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 2407065..2407466 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.560.1 >prot_C-linearis_contig10.560.1 ID=prot_C-linearis_contig10.560.1|Name=mRNA_C-linearis_contig10.560.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=134bp
GALDDDLAAAGIRVSAVGSGNDAGGGARGRGKTASPIRHGAGSSPLLSGA GSATAAASGGKSGGGGGGLETPQLYPPGTRPESGPLRPALAPAPPMAPPL PHEPMAGAEMGVPAASAAGAAYSPTEAAGAAGAG back to topmRNA from alignment at C-linearis_contig10:2407065..2407468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.560.1 ID=mRNA_C-linearis_contig10.560.1|Name=mRNA_C-linearis_contig10.560.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=404bp|location=Sequence derived from alignment at C-linearis_contig10:2407065..2407468+ (Chordaria linearis ClinC8C monoicous) GGCGCGCTCGATGACGACTTGGCGGCGGCAGGGATCAGAGTATCCGCGGT
CGGGAGCGGAAACGACGCCGGGGGTGGCGCGAGGGGGCGAGGAAAGACCG
CCTCCCCCATAAGGCACGGGGCGGGCTCTTCGCCGTTACTTTCAGGGGCC
GGCTCGGCGACCGCGGCTGCGAGCGGCGGCAAAAGCGGCGGCGGCGGCGG
TGGTCTCGAGACACCCCAGCTGTACCCGCCGGGCACACGGCCGGAGTCGG
GGCCGCTTCGGCCCGCCCTGGCACCGGCGCCCCCGATGGCACCGCCGCTT
CCGCACGAGCCGATGGCCGGAGCGGAGATGGGAGTGCCGGCCGCGTCCGC
CGCCGGCGCTGCCTACAGCCCGACAGAGGCGGCGGGCGCTGCGGGTGCTG
GGAG back to topCoding sequence (CDS) from alignment at C-linearis_contig10:2407065..2407468+ >mRNA_C-linearis_contig10.560.1 ID=mRNA_C-linearis_contig10.560.1|Name=mRNA_C-linearis_contig10.560.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at C-linearis_contig10:2407065..2407468+ (Chordaria linearis ClinC8C monoicous) GGCGCGCTCGATGACGACTTGGCGGCGGCAGGGATCAGAGTATCCGCGGT CGGGAGCGGAAACGACGCCGGGGGTGGCGCGAGGGGGCGAGGAAAGACCG CCTCCCCCATAAGGCACGGGGCGGGCTCTTCGCCGTTACTTTCAGGGGCC GGCTCGGCGACCGCGGCTGCGAGCGGCGGCAAAAGCGGCGGCGGCGGCGG TGGTCTCGAGACACCCCAGCTGTACCCGCCGGGCACACGGCCGGAGTCGG GGCCGCTTCGGCCCGCCCTGGCACCGGCGCCCCCGATGGCACCGCCGCTT CCGCACGAGCCGATGGCCGGAGCGGAGATGGGAGTGCCGGCCGCGTCCGC CGCCGGCGCTGCCTACAGCCCGACAGAGGCGGCGGGCGCTGCGGGTGCTG GGGGCGCGCTCGATGACGACTTGGCGGCGGCAGGGATCAGAGTATCCGCG GTCGGGAGCGGAAACGACGCCGGGGGTGGCGCGAGGGGGCGAGGAAAGAC CGCCTCCCCCATAAGGCACGGGGCGGGCTCTTCGCCGTTACTTTCAGGGG CCGGCTCGGCGACCGCGGCTGCGAGCGGCGGCAAAAGCGGCGGCGGCGGC GGTGGTCTCGAGACACCCCAGCTGTACCCGCCGGGCACACGGCCGGAGTC GGGGCCGCTTCGGCCCGCCCTGGCACCGGCGCCCCCGATGGCACCGCCGC TTCCGCACGAGCCGATGGCCGGAGCGGAGATGGGAGTGCCGGCCGCGTCC GCCGCCGGCGCTGCCTACAGCCCGACAGAGGCGGCGGGCGCTGCGGGTGC TGGG back to top
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