mRNA_C-linearis_contig10.551.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: D7FQH8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQH8_ECTSI) HSP 1 Score: 814 bits (2102), Expect = 2.780e-271 Identity = 696/1149 (60.57%), Postives = 753/1149 (65.54%), Query Frame = 1 Query: 871 IAAKEREEQIDLEVVKGLRDPKTKRRYGLYDPMKGEQEQEEGPTTTDGQEADPRXXXXXXXXXXXXXXXXXXXXXXXPAAFSPPVLAEVGDRGAGWRAKALKRAREKAEKSGQSLEELVGERWGSLDQLKRDARGASXXXXXXXXXXXGYHKGRNDLASLAAGEGRIAAGDTGGLIGKVGRDDGGXXXXXXXRLRIGRDAKDTDVLKRFSSKLEDALGKNDETRRDXXXXXXXXXXXXXXXXXXXXXXXXXX---ERGGEGRYRRSGSPDRGGXXXXXXXXXXXXXXHKRAAEDNRGHSSRRGQENRQGPGYSTRGRGGEGXXXXXXXXXXXXXXGGGTWRERQAREDTRAESE------------ASLDGGGDQRPRYPGMGRERGGVERGGDXXXDRRGGRGEADGDGRQSRHRRHRRDGSRDH--GGGCSSTGTGPTTTDGRGRVDSRDRPAQTGGERTGWSRAGTAGVGDNGGLSRNGSESGXXXXXXXRASTAAE----VGSGKKNGSSDGLQRQRRPPSHRGEGPGGGDELPGDGAGRKGAAGXXXXXXXXXXXXXXXSITTAAAATEKRAPAPTGVPVAAAPPAK-LLTEAELTKLAVAAMKAKLKGDKAAHARLTEEARFSSVGREANAAXXXXXXXXXXXXPWRPGQEDDGTAKSARQQQGEGGGNKRGNXXXXXXXXXXXXXXXE---DVEIVTAFDENGRPVRTGGAALMREDLRIGSRKGKLKKVGGRWAESSKDESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTE---------SAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWEDGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
IAAK REE+IDLEVVKGLRDPKT+R+YGLYDP+KGEQE P XXXXXXXXXXXXXXXXXXXX PA FSPP L VGD+GAGWRAKALKRAREKAEKSGQSLEE+VG+RWGSLDQLKRD+RGAS GY +GR++LASLAAGEGRI+A DTGGL+GKV XXXXXXXRLRIGRDA DTDVLKRFSSKLEDALGKNDETRR XXX R E R XXXXXXXXXXXXXX +G+ G T GGG+ R R+D+R +S+D G ++R ADG G R RRD SRD GGG SS G T R SR+ Q G T VG + GLS +G G +S++ + VG G G G+ R+ AA + A K A A P AK LLTEAELTKLAVAAMKAKLKGDKA+HARLTEEAR GREANAAXXXXXXXXXXXX PGQ XXXXXXXXXXXXXXX ++E+V +FDENGRP+RTGGAALMREDLR G+RKGKLKK GGRWAE KDESVADFVRRERE+GFEDMDETF+RNVSRLG+RFKGTELGGAHTGLAGEDEEE+VDMRMFQRPEDRMTAVAAAERQ+ KA+AEHRRQSA TSR C LCM++ FKK LVLSLGEHTYLYLATGTHRL+EGHCYIVP+RHTPASTACDEEVWREIELFKS+LRKM+A D S + X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARH FIEAVPVPRNASLDAPMYFRQALM+AGDEWSTHKKCIP DPRRGGIRRAVPKGFPFF+VEWEDGGYA IIEGEEA FPRDFGVDTLAG+LG+DPPSFGGR XXXXX XXXX EEERKLV+AFLEKWKAFDWTSELDG
Sbjct: 113 IAAKNREEEIDLEVVKGLRDPKTRRKYGLYDPLKGEQE------------GVPAXXXXXXXXXXXXXXXXXXXXGGLPATFSPPKLTGVGDKGAGWRAKALKRAREKAEKSGQSLEEIVGDRWGSLDQLKRDSRGASAGGRRGRGGRYGYQQGRDELASLAAGEGRISADDTGGLLGKVXXXX--XXXXXXXRLRIGRDANDTDVLKRFSSKLEDALGKNDETRRHRGVRRDDSKDRERGPRGGGEGGRXXXXDESRDQEXXXRGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDWNKGERALDGDRRET------------------AADGGGS-RLAGGRDDSRHRXXXXXXXXXXXXXYSSVDAGXNRR-----------------------------ADGAGAIGG--RARRDDSRDRRPGGGISSRGE---RTSVREAGTSRETDGQVGSR--------TTAVGKDDGLSSSGEGRGGSREEAGASSSSKDARPRVGDGGVGGRPAGVVRKTAA-----------------------AAAVAVTETAVPSTRTPPGDRSKATVLGKTAGVVEEGKAKATPTAKKLLTEAELTKLAVAAMKAKLKGDKASHARLTEEAR---AGREANAAXXXXXXXXXXXXXXXPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELEVVRSFDENGRPIRTGGAALMREDLRTGARKGKLKKAGGRWAEH-KDESVADFVRREREEGFEDMDETFVRNVSRLGSRFKGTELGGAHTGLAGEDEEEDVDMRMFQRPEDRMTAVAAAERQKAKAVAEHRRQSAVTSR---CPLCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSEGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKMAAADDXXXXXAXXXXXXSGSGDRKKXHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHAFIEAVPVPRNASLDAPMYFRQALMDAGDEWSTHKKCIPSDPRRGGIRRAVPKGFPFFHVEWEDGGYANIIEGEEANFPRDFGVDTLAGILGIDPPSFGGRGRXXXXXRWGXXXXGAAV--EEERKLVMAFLEKWKAFDWTSELDG 1154
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A6H5L7J6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J6_9PHAE) HSP 1 Score: 619 bits (1596), Expect = 1.720e-201 Identity = 434/563 (77.09%), Postives = 458/563 (81.35%), Query Frame = 1 Query: 2581 KLLTEAELTKLAVAAMKAKLKGDKAAHARLTEEARFSSVGREANAAXXXXXXXXXXXXPWRPGQEDDGTAKSARQQQGEGGGNKRGNXXXXXXXXXXXXXXX---EDVEIVTAFDENGRPVRTGGAALMREDLRIGSRKGKLKKVGGRWAESSKDESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV---------------IFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWEDGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
KLLTEAELTKLAVAAMKAKLKGDKA+HARLTEEAR GREANAAXXXXXXXXXXXX XXXXXXXXXXXXX E++E+VTAFDENGRP+RTGGAALMREDLR G+RKGKLKK GGRWAE KDESVADFVRRERE+GFEDMDETF+RNVSRLG+RFKGTELGGAHTGLAGEDEEE+VDMRMFQRPEDRMTAVAAAERQ+ K +A HRRQSA TSR C LCM++ FKK LVLSLGEHTYLYLATGTHRL+ GHCYIVP+RHTPASTACDEEVWREIELFKS+LRKM+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IFLETGGKPGSSAARH FIEAVPVPRNASLDAP++FRQALM+AGDEWSTHKKCIP DPRRGGIRRAVPKGFPFF+VEW DGGYA IIEGEEA FPRDFGVDTLAG+LG DPPSFGGR X EEERKLV+AFLEKWKAFDWTSELDG
Sbjct: 215 KLLTEAELTKLAVAAMKAKLKGDKASHARLTEEAR---AGREANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDDGEEELEVVTAFDENGRPIRTGGAALMREDLRTGARKGKLKKAGGRWAEH-KDESVADFVRREREEGFEDMDETFVRNVSRLGSRFKGTELGGAHTGLAGEDEEEDVDMRMFQRPEDRMTAVAAAERQKAKIVAAHRRQSAVTSR---CPLCMDSSSFKKRLVLSLGEHTYLYLATGTHRLSGGHCYIVPIRHTPASTACDEEVWREIELFKSSLRKMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFLETGGKPGSSAARHAFIEAVPVPRNASLDAPIFFRQALMDAGDEWSTHKKCIPSDPRRGGIRRAVPKGFPFFHVEWADGGYANIIEGEEANFPRDFGVDTLAGILGTDPPSFGGRGRGRGADAFXAV--------EEERKLVMAFLEKWKAFDWTSELDG 762
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A836CIX0_9STRA (CwfJ C-terminus 1-domain-containing protein-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIX0_9STRA) HSP 1 Score: 275 bits (704), Expect = 2.030e-79 Identity = 178/420 (42.38%), Postives = 235/420 (55.95%), Query Frame = 1 Query: 2956 MREDLRIGSRK-GKLKKVGGRWAESSKD-ESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGL-AGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWEDGG-YAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTS 4203
M EDLR RK GK+K+ ES+++ E + +F+RRER QG +MDE F+ NV RLG R+KGTELGG G AGEDEEE+VDM+MFQ +DR+T VAAAER + AI +H+ Q+AA S+ C LC + F L+++ G+H YL L G+ L++ HC IVPM+HT A+T C+E+VW EI+ FK+A+R M+ G+ ++F+ET G S H I+AVPVP DAP+YF+QAL+EA DEW+THKK I V P GGIRRAVP+ F +F VEW GG YA +IE +E +FP DFG +AG++GVDPP F + EE+KLV AF + W +DWTS
Sbjct: 1 MCEDLRSNPRKKGKVKES----RESAREGEGLEEFLRRERAQGERNMDEDFVNNVLRLGARYKGTELGGKKRGGGAGEDEEEDVDMKMFQSRDDRLTDVAAAERAQQAAITQHKAQTAALSQ---CKLCPGSKAFASRLMVANGQHVYLQLVVGS-GLSQQHCLIVPMKHTQAATTCEEDVWAEIDTFKAAMRAMAKARGN----------------------------------------------------------GILFMETA--LGFSKRPHASIDAVPVPLEVEQDAPLYFKQALLEAADEWATHKKVITV-PASGGIRRAVPRNFAYFAVEWGGGGGYAHVIE-QEDRFPADFGRGVVAGMMGVDPPRFNRKGQGASAA--------------EEQKLVDAFQKHWAPYDWTS 336
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A4D9D0S9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0S9_9STRA) HSP 1 Score: 280 bits (717), Expect = 3.030e-75 Identity = 207/552 (37.50%), Postives = 267/552 (48.37%), Query Frame = 1 Query: 2599 ELTKLAVAAMKAKLKGDKAAHARLTEEA-------RFSSVGREANAAXXXXXXXXXXXXPWRPGQEDDGTAKSARQQQGEGGGNKRGNXXXXXXXXXXXXXXXEDVEIVTAFDENGRP-VRTGGAA--LMREDLRIGSRKGKLKKVGGRWAESSKDESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTG--LAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWEDG-GYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
+ KL A++AK+KGD A RL EA R V RE A G+E + RQ++G G E +V A +GRP V GGA + REDLR G RKGK K +W + S+ + VRRE+ G EDMD F RNV RLG RFKG ELGG H G AG DEEEEVD+RMF++ EDR+TA A + R AI EH++ S AT+ C LCM++P F++ +LSLGEHT L L GH I+P++H A+T DE+V E+E K+ALR+ G ++FLET G RHT IEAVPVPR+ + DAP++F+Q L+E ++W+THKK I R +R VPKGFP+F+VEWE G GY I+E E +FPRDFG+ +AG+LGVDPP F + ER+ V FL +W+ FDWT EL G
Sbjct: 463 DANKLTAMALRAKMKGDSAGCERLMGEAAAARELARRDRVEREEGATRGGVGGGEGGM-----GREXXXXEGTGRQEEGSDG--------------------KEAAVVVPALSHDGRPLVGAGGAEADMRREDLRRGGRKGKTK-ANEQWEGDAL--SLEEMVRREK-MGGEDMDREFTRNVLRLGKRFKGAELGGKHAGGDQAGMDEEEEVDVRMFEKKEDRLTAKARQHQHRQTAIREHKKWSEATA---ACGLCMDSPSFRQDSLLSLGEHTLLLYRHRPSSLLPGHTCILPVKHADATTGLDEDVTGELERMKTALRRFWGSKGK----------------------------------------------------------GILFLETVASVGGRR-RHTVIEAVPVPRSVAADAPLFFKQGLLEVDEQWATHKKLIDTKGRP--LRACVPKGFPYFHVEWEAGQGYVHIVEDRE-QFPRDFGLSVVAGMLGVDPPRFDRKGQPRGNLGL-------------ERQAVAGFLREWQPFDWTQELKG 907
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A8K1FJM4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJM4_PYTOL) HSP 1 Score: 250 bits (638), Expect = 4.180e-65 Identity = 158/435 (36.32%), Postives = 234/435 (53.79%), Query Frame = 1 Query: 2953 LMREDLRIGSRKGKLKKVGGRWAESSKDESVA--DFVRRER------EQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEW------EDGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
L +ED+R GSRKGK A + +D+SV+ + VR+ER ++G +MD RN+ RLG R++G+E+ + +G DEE++VDM+M +RP+ +T AAAER R +++ ++++ T + C CM +P FKKHL+LSLGE+TYL + RL HC+IVP+ HT + T +E+VW E++ F+ A+ M A + V+FLE P RHT++E +PVP++ ++D P+YF+Q LM+ +EWSTHKK I GG++R VP F +F++EW + GGYA +IE +EA+FPRDFGV+ +AG+LGVDPP +G R E+E+ VL+FL+ W+ FDWT ELDG
Sbjct: 559 LEKEDMRYGSRKGKK-------ARTDQDDSVSLEELVRQERMSSAHVDEG--NMDAIHARNIVRLGTRYQGSEVNARNL-ASGFDEEDQVDMKMLERPDAHLTKRAAAERDRQRSVNQNKKWEDKTQK---CMACMHSPAFKKHLMLSLGEYTYLAMPNKP-RLHPAHCFIVPVDHTGSFTQANEQVWEELQRFQRAITAMCAKEFDLS---------------------------------------------------------VVFLEQTSAPHRK--RHTYVECIPVPKDVAMDTPLYFKQELMQVDEEWSTHKKIINTSD--GGLKRHVPPQFAYFHIEWPRTNKSDGGGYAHVIE-DEAQFPRDFGVNVVAGMLGVDPPKYGRRDTKRTF--------------EDEKHDVLSFLKHWEPFDWTKELDG 903
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A2D4BJ54_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ54_PYTIN) HSP 1 Score: 241 bits (615), Expect = 9.140e-64 Identity = 155/440 (35.23%), Postives = 232/440 (52.73%), Query Frame = 1 Query: 2953 LMREDLRIGSRKGKLKKVGGRWAESSKDE--SVADFVRRER------EQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWE-----------DGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
L REDLR GSRKGK + + SKD+ S+ + VR+ER ++G +MD + RN+ RLG R++G+E + +G DEE+++D +M++R E+R+T AA+ER+R + ++ +++ T + C CM++P FKKHL+LSLGE+TYL + +L HC I P+ HT + +E+VW E++ F+ AL KM + ++F+E P RHT +E +PVP++ ++D P+YF+Q LM+A +EWSTHKK I D GG++R VP F +F++EW GGYA +IE EE +FPRDFGV+ +AG+LGVDPP +G R ++E++ VL FL+ W AFDWT +LDG
Sbjct: 315 LEREDLRYGSRKGKKART-----DPSKDDGSSLTELVRKERMAHAHVDEG--NMDAIYARNILRLGTRYQGSEPNARNLS-SGFDEEDQLDTKMYERSEERLTKRAASERERQRFVSANKKWEDRTHK---CMTCMQSPSFKKHLMLSLGEYTYLSVPNKP-KLHLAHCIIAPVEHTASFNQANEQVWEEMQHFQRALTKMCEAEFGMS---------------------------------------------------------MVFIEQTSAPHRQ--RHTIMECIPVPKDVAMDTPLYFKQELMQADEEWSTHKKII--DTTDGGLKRHVPPQFAYFHIEWPATTDKSGRSGGGGGYAHVIEDEE-RFPRDFGVNVVAGMLGVDPPKYGRRDTKRSF--------------DDEKRDVLTFLKHWNAFDWTQQLDG 666
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: K3WTU0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTU0_GLOUD) HSP 1 Score: 244 bits (623), Expect = 4.730e-63 Identity = 162/454 (35.68%), Postives = 228/454 (50.22%), Query Frame = 1 Query: 2890 DVEIVTAFDENGRPVRTGGAALMREDLRIGSRKGKLKKVGGRWAESSKDESVADFVRREREQ----GFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWE--------DGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
D E A + + + L +ED+R GSRKGK R ++ + S+ + VR ER G DMD RN+ RLG+R+KGTE+ + +G DEE+++D +M++ + +T A ER+R +AI E ++ T + C CM++P FKKHL+LSLGE TYL + RL GHC IVP+ HT +ST ++VW EI+ F+ +L M A T ++F+E P RHT IE +PV R +LD P+YF+Q LM+ +EWSTHKK I D GG++R VP F +F++EW GGYA +IE +E KFP DFGV+ +AG+LGVDPP +G R E+E++ VLAFL+ W+ FDWT +LDG
Sbjct: 555 DQEAAAASVPHYEAINSALPPLEKEDMRYGSRKGKK----SRDSKGDNNVSLDELVREERMTSAHIGTGDMDSIHARNILRLGSRYKGTEVNAQNLS-SGFDEEDQIDTKMYENRDAHLTKRAIHERERARAIGETKKWDEKTQK---CARCMQSPAFKKHLMLSLGEFTYLAIPNKP-RLHPGHCLIVPLDHTSSSTQASDQVWDEIKRFQKSLSAMCAKQFGTS---------------------------------------------------------MVFIEQTSAPHRK--RHTVIECIPVDRELALDTPLYFKQELMQVDEEWSTHKKII--DTASGGVKRHVPPQFAYFHIEWAGDLKTGNGSGGYAHVIE-DETKFPPDFGVNVVAGMLGVDPPRYGRRDAGHRRSF------------EKEKEEVLAFLKDWERFDWTQDLDG 925
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A2D4CJ49_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJ49_PYTIN) HSP 1 Score: 223 bits (567), Expect = 2.770e-61 Identity = 133/387 (34.37%), Postives = 201/387 (51.94%), Query Frame = 1 Query: 3088 MDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWE-----------DGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
MD + RN+ RLG R++G+E + +G DEE+++D +M++R ++R+T AA+ERQR + ++ +++ T + C CM++P FKKH++LSLGE+TYL + +L HC I P+ HT + +E VW E++ F+ AL KM + ++F+E P RHT +E +PVP++ ++D P+YF+Q LM+A +EWSTHKK I D GG++R VP F +F++EW GGYA +IE EE +FPRDFGV+ +AG+LGVDPP +G R ++E++ VL FL+ W AFDWT +LDG
Sbjct: 1 MDAIYARNILRLGTRYQGSEPNARNLS-SGFDEEDQLDTKMYERSKERLTKRAASERQRQRFVSANKKWEDRTHK---CMTCMQSPAFKKHMMLSLGEYTYLSVPNKP-KLHLAHCIIAPVEHTASFNQANEHVWEEMQHFQRALTKMCEAEFGMS---------------------------------------------------------MVFIEQTSAPHRQ--RHTIMECIPVPKDVAMDTPLYFKQELMQADEEWSTHKKII--DTTDGGLKRHVPPQFAYFHIEWPATTDKSGRRGGGGGYAHVIEDEE-RFPRDFGVNVVAGMLGVDPPKYGRRDTKRSF--------------DDEKRDVLNFLKHWNAFDWTQQLDG 306
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A7S2SD90_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD90_9STRA) HSP 1 Score: 231 bits (588), Expect = 6.450e-60 Identity = 155/399 (38.85%), Postives = 205/399 (51.38%), Query Frame = 1 Query: 2890 DVEIVTAFDENGRPVRT-----GGAALMREDLRIGSRKGKLKKVGGRWAESSKDESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWEDGGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSF 4071
+VE+V FD +GR + G +EDL+ G KGK K G A V D V +ERE G DMDE F RNV RLG +KG E G +G DEEE+VDM+MF + E RMT ++QR +A+ +H++ A M+ P FKKHLV++ GEH Y+ L T LAE C+IVP++ ++ C EEVW EI+ FKS+LR+M G V+FLE+ + AR IEAVPVP + DAP+YF+QAL + +EWS H K I + R G+R+A+P+ FP+F+VEW GGYA IIE E+ +F FG+D LAG+LGVDPPSF
Sbjct: 362 NVEVVAPFDASGRRLHALATADGPVDRAKEDLKRGRWKGKRKPAAGTEAMD-----VKDMVAQEREGGV-DMDELFARNVVRLGGHYKGAEAGP--NSRSGFDEEEDVDMKMFAKQEQRMTQQKLLDQQRQRAVNDHKKWLAMMQTNPFS---MDNPSFKKHLVIAQGEHAYIMLRTSG-ALAERQCWIVPIKQAISTRGCSEEVWEEIQSFKSSLRRMYGAQGQ----------------------------------------------------------GVLFLESVRRGPRHWAR---IEAVPVPADVEADAPLYFKQALSNSDEEWSIHNKVIDLAER--GLRKAIPEDFPYFSVEWRSGGYAHIIEDED-QFSAQFGIDVLAGMLGVDPPSF 684
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Match: A0A3F2RVM3_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVM3_9STRA) HSP 1 Score: 231 bits (589), Expect = 6.900e-60 Identity = 158/430 (36.74%), Postives = 214/430 (49.77%), Query Frame = 1 Query: 2953 LMREDLRIGSRKGKLKK-----VGGRWAESSKDESVADFVRREREQGFEDMDETFLRNVSRLGNRFKGTELGGAHTGLAGEDEEEEVDMRMFQRPEDRMTAVAAAERQRTKAIAEHRRQSAATSRRVLCHLCMEAPGFKKHLVLSLGEHTYLYLATGTHRLAEGHCYIVPMRHTPASTACDEEVWREIELFKSALRKMSAGDGSTESAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIFLETGGKPGSSAARHTFIEAVPVPRNASLDAPMYFRQALMEAGDEWSTHKKCIPVDPRRGGIRRAVPKGFPFFNVEWED----GGYAQIIEGEEAKFPRDFGVDTLAGVLGVDPPSFGGRXXXXXXXXXXXXXXXXXXXXEEERKLVLAFLEKWKAFDWTSELDG 4215
L +ED+R GSRKGK + + G S DE V + G MD RN+ RLG+R+KGTE+ + +G DEE++VDM+M ++P +T A A+R T A+ E ++ T + C LCM+ P FKKHL+LSLGE TYL L RL GHC IVP+ HT + DE+V EI F+SAL +M+ +T ++F+E P RHT IE +PV +LD P+YF+Q L++A EWSTHK I D +GGI+ VP F +F++EW GGYA +IE +EA+FPRDFGV+ +AG+L V PP +G R E E+ VLAFL+ W+ FDWT +LDG
Sbjct: 383 LEKEDMRYGSRKGKKHRADPLDISGPDVAVSLDELVREERMSSARVGQGSMDSIHARNIIRLGSRYKGTEVNAQNLS-SGFDEEDQVDMKMLEKPGANLTRRAQAQRDHTMAVNETKKWDERTQK---CQLCMKGPAFKKHLMLSLGEFTYLALPNRP-RLHPGHCVIVPIDHTCSVVQADEQVCEEITRFQSALSRMAEKLYNTS---------------------------------------------------------MVFIEQTSAPHRK--RHTVIECIPVTTELALDTPLYFKQELVQADGEWSTHKPII--DTSKGGIKNHVPPTFSYFHIEWRTPECRGGYAHVIE-DEARFPRDFGVNVVAGMLEVTPPKYGRREAGNRRSL------------ESEKHDVLAFLKDWEPFDWTQQLDG 733 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.551.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.551.1 >prot_C-linearis_contig10.551.1 ID=prot_C-linearis_contig10.551.1|Name=mRNA_C-linearis_contig10.551.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1085bp MKGEQEQEEGPTTTDGQEADPRAAGGGLRGGAGTGGGGGGGGGGSPAAFSback to top mRNA from alignment at C-linearis_contig10:2341584..2357491+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.551.1 ID=mRNA_C-linearis_contig10.551.1|Name=mRNA_C-linearis_contig10.551.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=15908bp|location=Sequence derived from alignment at C-linearis_contig10:2341584..2357491+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2341584..2357491+ >mRNA_C-linearis_contig10.551.1 ID=mRNA_C-linearis_contig10.551.1|Name=mRNA_C-linearis_contig10.551.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6510bp|location=Sequence derived from alignment at C-linearis_contig10:2341584..2357491+ (Chordaria linearis ClinC8C monoicous)back to top |