mRNA_C-linearis_contig10.539.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: D7FZV5_ECTSI (WSC domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV5_ECTSI) HSP 1 Score: 947 bits (2447), Expect = 2.990e-309 Identity = 573/1159 (49.44%), Postives = 697/1159 (60.14%), Query Frame = 1 Query: 3223 MAVGMPYFGVQFGRECHCGKRSPSNDPASNCVSPCVGDRTSVCGGAWANTVYRITGLIDGDAGASEAGRDSTATTPPLTPTGP---LTPDTAPGMLPEECQQPS---GSAAVVLPTHCAELLGEEHAERESAMVEKVELSEAAAAERRE--RRRGLPSGQVDE-SGDGDDDRDXXXXXXXXXXXXXXXXXGGARAAREQGEDEGTEASVGNGNLTALPFQVFHPLKAESLTPGAVVTVTWATSSGWDGPGGDSVEGVDLWLIEAAGNDSEGERISSGIGADCRVYEGETCQHSLAVPGAYKRDGGSGNETSGILAFVLELRASEASGALGRSSIFSIVEKKSFTFTQPHGYFVALRGSLTDIAWRSTGNTMHVWIDLHDVITGGVAAAIGAAPNTGSLAWAVPHDLPAGMYYFAIRPLTGQRRFENNEASEIFWVVDLSESKMPPLALLSPAPGEHVATGSKFFVSWTSPIIDSRVKITLQNEWAWEVETLVFEGPNRNKFLWQVPSVAPGAGYYLQLEDADEPHDGWQGQRIVGGVGRKEFNMIGRGVRTGAFTIAPAQPEVALGNMFRGQTGHVWTKGVALMTEVDNSARDEKGGPLPVVLELMRGGKPVWTVPGSPVPALGSSDPAAATMPQLEPDDGLYYLRATSLLYHQAVDVSPEFAVTSHLPMEWAGASSSLKLDRSWQDVVFEPGKSYYVSWTTTFVGRVMVELTRAE-DTMAEGGDVVNLSPGGRRTTSLPNTGGFWLAVPFDDELGADWCPSWPDTEHPHQNGNGTSTSSITXXXXXXXXXXXXXXXXXXXXXXXXXXXSATVDAAVDLDG------CCFVLSVSDAHNTGVGDRSAPFCIAGSSSADGAAADGDADLSGDDNDGGAGFAAKAVRDSGATLEVIKFPSGRWEIGTAQEIQWASESVHSPVVINLLGPETDSEEAEDDDTDGNDDRVSTPADGSSGEEDSDDATEV--------------ATTERRLRRTMLLGSGLPTAGSLLARLGPDGGPQIKDVPPGPGYTIEVRDSAGATRAASPVFEVVAPPRISVSKAAYNATANKGDTCRVEWEYTGVSSVVRVQLFQGSPTPVTLDGEECVPFRITYGGGGGRGGGEGEVWESGCVQDPASPLYQRCAVEVDQRSRPERTGYCAKPKEHMK 6609
MA+G +FG+QFGREC CG PSNDPA NC+SPC GDR+ VCGGAWANTVYRI G+ GD S +T T P P TP + P LP EC+Q SA PT CAELLGEEHAE +A V + E E RRR L G ++ S +DD XXXXXXXXXXXXXXXXX G R+Q +++ V + T LP++V HP+ E L+ GA+ +VTWA + G D GG +GV LWLI+A G I+ G+ ADC V GETC+++ AVP +GG E + AF LELR + S LGRS +F IVEK +FTF P G +RGS+T++ W S G T VWI+L D TG VAA +GA NTGS+ W VP + G+Y+ IRPL GQR E+ EASE+F V D S + PPLALLSP GE+V G++F V+WTSP I +RV+ITLQNEW WE ETL+FEG N N+F WQVP ++ GAGYYLQLEDADE HDGWQ RI+GGVG EF++IGRGVRT AFTI AQPEV+LGN+FRGQTGHVWTK VAL EV N+ +DE G PLPV+LELM+GG+PVWTVPGS P GSS TMP+ EP+DGLYYLRA+S+L+HQA DVSPEF V S+LP EWAGASS+LKLD VFEPG+SYY+SW+T FVGRV VEL RA D E G+ L R ++PNTGGFW +PF ELG DWCP P + GN SS + AT D + CCF LSVSDA + V D S FCI + D SG++ D TLE++KFP+ +WE+ EI+WAS+ +HSP+VINLLGPE E A DD+ T RR+R+ LGSGLP GSL+ + Q+ V PG Y IEVRD +G R+ SP FE++APP IS+S NATANKGD+CR+EW +TG VRVQLF GSP PVT G CVPF+ T EV ++GCVQDP SP YQ+CA +VD+ SRP +TGYCAKP ++MK
Sbjct: 1 MAIGKAFFGLQFGRECRCGDNPPSNDPAGNCISPCTGDRSRVCGGAWANTVYRIRGISSGDTSYSPLDTFTTTATLPPAPVPAHRDSTPRSTPTHLPAECRQQGRSKSSAESPTPTRCAELLGEEHAE--NAFVPEDTYPEDGERENHTAGRRRWLSHGTGEQRSAHSNDDAAXXXXXXXXXXXXXXXXXXG----RDQDDEDNKAIGVADDIPTLLPYKVIHPVMGEFLSTGAIASVTWAATEGLDEGGGGRAQGVKLWLIDATGGIGAEALIAEGVDADCMVSHGETCRYTFAVPRFLSPEGGP-MEATAEKAFTLELRGLDESHILGRSQVFFIVEKTAFTFLAPRGGTGPVRGSVTEVLWESAGGTKDVWIELCDADTGRVAAVVGATANTGSVQWVVPRYVQEGVYFLVIRPLHGQRLMESTEASELFLVGDPSPATTPPLALLSPVLGEYVPVGARFLVTWTSPDI-ARVRITLQNEWEWEAETLLFEGVNGNEFFWQVPEISTGAGYYLQLEDADEHHDGWQDHRIIGGVGETEFDLIGRGVRTRAFTIGHAQPEVSLGNIFRGQTGHVWTKDVALRIEVSNTGQDETG-PLPVLLELMQGGRPVWTVPGSSTPVSGSSSVVTTTMPRFEPEDGLYYLRASSMLHHQAADVSPEFGVISYLPTEWAGASSTLKLDNRLHADVFEPGQSYYISWSTNFVGRVTVELKRANSDHEGEEGERPTLL---ERGETIPNTGGFWFTIPFRSELGVDWCPG----RRP-KGGNQKGNSSKSGV-------------------------GATADTSXXXXXXXXXXXCCFTLSVSDARDAAVRDESDVFCINNAG-----------DSSGEERD--------------TTLEIVKFPTQQWELDKDLEIRWASKHLHSPIVINLLGPEI--EPATDDEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHTTVRRRVRQ---LGSGLPATGSLVVPMS-----QMASVAPGDDYVIEVRDDSGNARSVSPSFEMIAPPGISISNTIVNATANKGDSCRIEWTFTGKPFPVRVQLFSGSPIPVTTSGTTCVPFKTT------DSYSVREVQQTGCVQDPTSPYYQQCATQVDRDSRPRQTGYCAKPAQYMK 1076
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A6H5L3W1_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W1_9PHAE) HSP 1 Score: 657 bits (1695), Expect = 1.410e-197 Identity = 653/1842 (35.45%), Postives = 820/1842 (44.52%), Query Frame = 1 Query: 3223 MAVGMPYFGVQFGRECHCGKRSPSNDPASNCVSPCVGDRTSVCGGAWANTVYRITGLIDGDAGASEAGRDSTATTPPLTPTGPL------TPDTAPGMLPEECQQPSGSAAVV---LPTHCAELLGEEHAERESAMVEKVELSEAAAAERRE--RRRGLPSG--------QVDESGDGDDDRDXXXXXXXXXXXXXXXXXGGARAAREQGEDEGTEASVGNGNLTALPFQVFHPLKA--------------------ESLTPGAVVTVTWATSSGWDGPGGDSVEGVDLWLIEAAGNDSEGERISSGIGADC------------------------------RVYEGETCQHSLAVPGAYKRDGGSGNETSGILAFVLELRASEASGALGRSSIFSIVEKKSFTFTQPHGYFVALRGSLTDIAWRSTGNTMHVWIDLHDVITGGVAAAIGAAPNTGSLAWAVPHDLPAGMYYFAIRPLTGQRRFENNEASEIFWVVDLSESKMPPLALLSPAPGEHVATGSKFFVSWTSPIIDSRVKITLQNEWAWEVETLVFEGPNRNKFLWQVPSVAPGAGYYLQLEDADEPHDGWQGQRIVGGVGRKEFNMIGRGVRTGAFTIAPAQPEVALGNMFRGQTGHVWTKGVALMTEVDNSARDEKGGPLPVVLELMRGGKPVWTVPGSPVPALGSSDPAAATMPQLEPDDGLYYLRATSLLYHQAVDVSPEFAVTSHLPMEWAGASSSLKLDRSWQDVVFEPGKSYYVSWTTTFVGRVMVELTRAEDTMAEGGDVVNLSPGGRRTTSLPNTGGFWLAVPFDDELGADWCPSWPDTEHPHQNGNGTSTSSITXXXXXXXXXXXXXXXXXXXXXXXXXXXSATVDAAVDLDGCCFVLSVSDAHNTGVGDRSAPFCIAGSSSADGAAADGDADLSGDDNDGGAGFAAKAVRDSGATLEVIKFPSGRWEIGTAQEIQWASESVHSPVVINLLGPETD---SEEAEDDDTDGNDDRVSTPADGSSGEEDSDDATEVATTERRLRRTMLLGSGLPTAGSLLARLGPDGGPQIKDVPPGPGYTIEV-------------------------------------------------------------RDSAGATRAASPVFEVVAPPRISVSKAAYNATANKGDTCRVEWEYTGVSSVVRVQLFQGSPTPVTLDGEECVPFRITYGGGGGRGGGEGEVWESGCVQDPASPLYQRCAVEVDQRSRPERTGYCAKPKEHMKVVWQSYEIPATERAAEVTIPRDEFQLPSVGPSYFWKASFKAHGESETFSLRYPSILISFRTSGLSLGNITEVGAEAVLVGAVERSLYLKEGRLGLWSIDPNPFQNRTSXXXXXXXXXXXXXPASQERGSGATSYTTXXXXXXXXSNKDDXGXXXXXXXXXXXXXXXXEKFPYDPENYDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDYDPYNS------GIIGEDDFNGDSASVDATGGSRRRSRWLRRLPSAGPVPLSGVRTIAARRQTQLRDIGRESSSEEEQSDEMAAVEGNEVLY----DSRSDDNAGGFPGRIGDSLDAKIEHAIDTVEE----EQD---------MTDDTPLQVTLKMAAAKAPWEERSPKEVLQLLGFLCESNLLSQELGAVECASISLRDEAAGDDGHQDSFESILGRVRPGSVGFLTAEDSGFV--VLPVMIALFAVTGLVVRKRRSAHRQRAYFSRCGKNSKNNKPGVRYY--RQVGRAGNDNDDVLSVEGEDAYGEASCGRAPSVRSPGSFAGTIDSDDETGFSANYGGPSRRGRHSRGFREAASNIVAKVLSG 8268
MA+G P+FG+QFGRECHCG P NDPA NCVSPC GDR+ VCGGAWANTVYRI G+ GD S ++ TT L P P+ T + P LP EC+Q S + PT CAELLGEEHAE +A+V + E E +RR L G D++ DD R+XXXXXXXXXXXXXXXXX +A V + T LP++V +K+ E + +VTWA + G D GGD +GV+LWLI A G I+ G+ ADC +V +GETC+++ AVP +GG+ E + AF LELR + S LGRS +F IVEK +FTF P G +RGS+T++ W S G T VWI+L D TG VAA +GA NTGS+ W VP + G+Y+F IRPL GQR E ++F VV HV KITLQNEW WE ETL+FEG N N+F WQVP ++ GAGYYLQLEDADE HDGWQG RI+GGVG EF +IGRGVRT AFTI AQPE A DVSPEF V S+LP EW G+SS+LKLD VF+PG+SYY+SW+TTFVGRV G DWCP + GNG SS + XXXXXXXXXXXXXXXXX++ CCF LSVSDA + V D S FCI DN G +++ RD+ LE++KFP+ +WE+G EI+WAS+ +HS +VINLLGPE + + EAEDD + D + S+ A+ G S D + TT RR R LGSGLP GSL+ + Q+ DV PG Y IEV RD +G ++ SP FE++APP IS+S NATANKGD+ RVEW +TG VR+QLF G P PVT G CVPF+ T R G EV ++GCVQDP SP YQ+CA ++D+ SRP +TG+CAKP ++MK H S F LVGA+E SL L++GRL L + + ++ S E + +Y DDX XXX XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD P+ S ++ D + + + A +RR RW R S P +G R ++A + D+RS ++ G G + L E + ++ EQD TD PL++T KMA A W+ERSP+E + LLGFLCES+LLS+ELG VEC SI++RDE + + ++ +ESILGR R + GFL S V + VM+AL +V+R + + P R + RQV SPGSFAG SDD+ GF G R S GFR+AASNIVA+VLSG
Sbjct: 1 MAIGKPFFGLQFGRECHCGDNPPYNDPAGNCVSPCTGDRSRVCGGAWANTVYRIRGISSGDT--SYTPLETFTTTATLAPA-PVPAHRDSTSRSTPTHLPAECRQQGRSKSSTNSPTPTRCAELLGEEHAE--NALVPEDTYPEDGERENHNTRKRRWLSHGTGEQRSAHSNDDAAYDDDSRNXXXXXXXXXXXXXXXXXXDNKAI-----------DVADDIPTLLPYKVSQNVKSTAEQGVGETRRKYYFGATGLEGRDAMSTASVTWAATEGLDEGGGDRAQGVELWLI-ATGETGAEALIAEGVDADCMTTSCHPAQILRSSTPLVSRRFPPIFAAVAKVTQGETCRYTFAVPRFLTPEGGA-MEATAEKAFTLELRGLDESHILGRSQVFFIVEKTAFTFLAPRGGTGPVRGSVTEVLWESAGGTKDVWIELCDADTGRVAAVVGAMTNTGSVQWVVPRYVQEGVYFFVIRPLHGQRL---TEVRQLFRVV------------------AHVCV---------------LFKITLQNEWEWEAETLLFEGANGNEFYWQVPEISTGAGYYLQLEDADEHHDGWQGHRIIGGVGETEFGLIGRGVRTRAFTIGHAQPEAA--------------------------------------------------------------------------------------------DVSPEFGVISYLPKEWGGSSSTLKLDNRLHADVFQPGQSYYISWSTTFVGRV---------------------------------------------TGIDWCPG-----RRLKGGNGNXXSSKSGISVTADTNSXXXXXXXXXXXXXXXXXNS----------CCFTLSVSDARDAAVRDDSDVFCI--------------------DN---VGDSSREQRDT--KLEIVKFPTEQWELGKDLEIRWASKHLHSRIVINLLGPEIEPTLNAEAEDDGDNEPDSQESSAAESDEG---SKDFSAAHTTVRR--RVEQLGSGLPATGSLVVPMS-----QMVDVAPGDDYVIEVKGERFVAALNAHPPPQVLVLVHRAPRVVAPVSGIEPQWCRRMHPMFQCSAKTACALSFIQVRDESGKAKSVSPSFEMIAPPSISISNTIINATANKGDSNRVEWTFTGKPFPVRLQLFSGFPIPVTTSGTTCVPFKTTD-----RYSGR-EVQQTGCVQDPTSPYYQQCATQIDRDSRPRQTGHCAKPAQYMKA--------------------------------------SKHAISSHFH---------------------------ALVGALESSLLLEKGRLELLLFNGSAYEKYNSSNEHASIPDYGYDKGGGESYENSNNYEPVISY----DTGDDXXXXXHDGNDDSNDNKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDADPPHGSHQRRRLALLRADAVHVRTHTPAAGDEQQRRDRWQLRSASIH-APNNGERKLSATQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDTRSPMSSVGGAGVREEDLKHGSEPVVGAEDDPPALEQDGAAAEAGGASTDTPPLEITFKMAPAATAWQERSPRENMNLLGFLCESDLLSEELGKVECESITVRDEFSSGEQQEEHYESILGRDRSDNQGFLDGGRSYKVAAIASVMVALLLGGAVVIRLITNV---------------THVPTARPFLVRQV------------------------------HSPGSFAGGFTSDDDRGF-----GRDAPRRPSGGFRDAASNIVARVLSG 1475
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: D7FZV4_ECTSI (Disintegrin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV4_ECTSI) HSP 1 Score: 432 bits (1112), Expect = 1.450e-133 Identity = 217/345 (62.90%), Postives = 253/345 (73.33%), Query Frame = 1 Query: 823 MDTGYFKASTGFGADQAGNLYGDEPDMTLDEAIDLAESEVQGIVSLVNVLYTDQLRLYIELKRLEIRTEVWREPPAEVVGEAEEGEATGKGIEERLNPQEARWNHEPLDHTRSRGRDRLDYGCPYSREDGME-FNPMSPSSDHHTTLKGFAAWRESLPPAERLGIWQLLTACYGEVVQGLSYEAATCSDSMGVGWVSRRPLATWEILARELGHSLGASDFLDETSDLLRPTGSWNSFA-IERAESRREVCQHIVGNGDCFQPYQPTCGNGVLEPGEECDDDSPCCVPTECKLAFNARCSRGPSWWR---TANDGDXXXXXXXGGWQGQCCSDSCQFLSSATLCEV 1842
MDTGYFKASTGFG DQ+GN YG +P++TL+EAIDLAESEVQGIVSLVNVL+ DQ +YIE+K +EIR + AE E R +P EA WNHEPLDHT+S + RL+YGCPYSR DG E +P PSSDH +TLKGFAAWRESLPP +RLG+WQLLTACY E V+GLSY AA CSDSMGVGWVSRR TWE+LA+ELGHSLG+S FLD +D PT S + + +ESR+EVC+HI+ N +CFQPY+PTCGNG+LEPGE+CDDDSPCC P +CKL NARCS G SWW+ T N G W GQCC+ CQFLSSATLC V
Sbjct: 1 MDTGYFKASTGFGVDQSGNSYGGDPELTLEEAIDLAESEVQGIVSLVNVLFADQFGVYIEVKNIEIRVQT-----------AEATEXXXXXXXXR-DPLEANWNHEPLDHTKSHAQGRLEYGCPYSRLDGTEETSPNEPSSDHFSTLKGFAAWRESLPPEDRLGVWQLLTACYDEGVEGLSYTAAACSDSMGVGWVSRRTFGTWEVLAQELGHSLGSSGFLDIANDSSSPTRDRESSSDMGWSESRKEVCRHILSNEECFQPYEPTCGNGILEPGEDCDDDSPCCRPNQCKLVPNARCSPGSSWWKSRPTNNSSANPAVVAHGDWTGQCCTVDCQFLSSATLCRV 333
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A6H5L3K4_9PHAE (Disintegrin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3K4_9PHAE) HSP 1 Score: 403 bits (1036), Expect = 2.920e-123 Identity = 211/353 (59.77%), Postives = 247/353 (69.97%), Query Frame = 1 Query: 823 MDTGYFKASTGFGADQAGNLYGDEPDMTLDEAIDLAESEVQGIVSLVNVLYTDQLRLYIELKRLEIRTEVWREPPAEVVGEAEEGEATGKGIEERLNPQEARWNHEPLDHTRSRGRDRLDYGCPYSREDGME-FNPMSPSSDHHTTLKGFAAWRESLPPAERLGIWQLLTACYGEVVQGLSYEAATCSDSMGVGWVSRRPLATWEILARELGHSLGASDFLDETSDLLRPTGSWNSFAIERAESRREVCQH--IVGNGDC-------FQPYQPTCGNGVLEPGEECDDDSPCCVPTECKLAFNARCSRGPSWWR---TANDGDXXXXXXXGGWQGQCCSDSCQFLSSATLCEV 1842
MDTGYFKASTGFG DQ+GN YG +P++TL+EAIDLAESEVQGIVSLVNVL+TDQ +YIE+K +EIR + AE + E+ + E+ +P EA+WNHEPLDHT+S G+ RL+YGCPYSR D E +P PSSDH +TLKGFAAWRESLPP +RLG+WQLLTACY E V+GLSY AA CSDSMGVGWVSRR L TWE+LA+ELGHSLG+S FLD + + S I E+ C G C FQPY+PTCGNG+LEPGE+CDDDSPCC P +CKL NARCS G SWW+ T N G W GQCC+ CQFLSSATLC V
Sbjct: 1 MDTGYFKASTGFGVDQSGNSYGGDPELTLEEAIDLAESEVQGIVSLVNVLFTDQFGVYIEVKNIEIRVQT-----AETTEDQEQEQ-------EQWDPLEAKWNHEPLDHTKSHGQGRLEYGCPYSRLDVTEETSPNEPSSDHFSTLKGFAAWRESLPPEDRLGVWQLLTACYDEGVEGLSYTAAACSDSMGVGWVSRRTLGTWEVLAQELGHSLGSSGFLDIAKHICYFSASVPP-PIRNYETSLRSCNDSSFFGMPFCDTFRCMFFQPYEPTCGNGILEPGEDCDDDSPCCRPNQCKLVPNARCSPGSSWWKSRPTNNSSANPAVVAHGDWTGQCCTVDCQFLSSATLCRV 340
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A4D9CZV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZV7_9STRA) HSP 1 Score: 197 bits (500), Expect = 2.000e-46 Identity = 140/433 (32.33%), Postives = 188/433 (43.42%), Query Frame = 1 Query: 697 SLESFRMTAAVGNNVGWGWDGGPFGASPECPSSPRVLQIGIAMDTGYFKASTGFGADQAGNLYGDEPDMTLDEAIDLAESEVQGIVSLVNVLYTDQLRLYIELKRLEIRTEVWREPPAEVVGEAEEGEATGKGIEERLNPQEARWNHEPLDHTRSRGRDRLDYGCPYSREDGMEFNPMSPSSDHHTTLKGFAAWRESLPPAERLGIWQLLTACY---GEVVQGLSYEAATCS-DSMGVGWVSRRPLATWEILARELGHSLGASDFLDETSDLLRPTGSWNSFAIERAESRREVCQHIVG-NGDCFQPYQPTCGNGVLEPGEECDDDSPCCVPTECKLAFNARCSRG--PSWWRTANDGDXXXXXXXGGWQGQCCSDSCQFLSSATLCEVPGG-ETGVCANGGCRRIHKPRLGSYETCVNPEAPDFNPCMEHYR 1971
+L S M A +N P+G CPS +GIA D G+ K TG G+ + A+ +++Q +++VN LY D +++ L +RT P WN EP D G R GCP SR + SD+ L F AWR LPP+ R +W LLT C+ G V GL+Y ATCS +++GVGW + AT+ +A ELGH++GA ++ + + +++E + EVC H+ G C+ P CGNGVLEPGEECDD S CC CKLA A C+ G P+ CC+ C+FL + T C VPGG ETG C NG CR +Y AP N C EH R
Sbjct: 277 TLTSIFMNALANSNS-------PYGLMTGCPSIMYRAPVGIAADAGFTKRLTGLGSTTR----------NVRAAVQRVNADIQNQMNIVNFLYVDMGNVFLTLGETLVRTA----------------------------PGGDDWNQEPRDPEALTGASRRQNGCPMSRSSRDD-------SDYQDLLDSFGAWRSRLPPSRRYAVWHLLTNCFPAPGTV--GLAYIGATCSTNNIGVGWTGLQNEATFMTMAHELGHNMGAYHSMNTGGVMSYDPVTEKEYSLE-GNNPTEVCNHVTSVKGVCYDVLTPECGNGVLEPGEECDDTSGCCDLKTCKLAREAMCTPGLDPA----------------------CCTADCKFLPTTTGCNVPGGPETGYCYNGYCR--FNRLAAAYSNLQGCNAPPENACKEHVR 630
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: D7FZV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV6_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.740e-34 Identity = 92/199 (46.23%), Postives = 110/199 (55.28%), Query Frame = 1 Query: 7693 LQLLGFLCESNLLSQELGAVECASISLRDEAAGDDGHQDSFESILGRVRPGSVGFLTAEDSGFVVLPVMIALFAVTGLVVRKRRSAHRQRAYFSRCGKNSKNNKPGVRYYRQVGRAGNDNDDVLSVEGEDAYGEASCGRAPSVRSPGSFAGTIDSDDETGFSANYGGPSRRGRHSRGFREAASNIVAKVLSGACRLTPL 8289
+ LLGFLCESNLL +ELG VEC SI++RDE + + ++ +E RK+R AHRQR YFSR +K NKPGVRYYR+V DNDDVLS+EGED+YG+ V SPGSFAG SDD+ GF GP R S GFREAASNIVA+VLSG P+
Sbjct: 1 MNLLGFLCESNLLGEELGKVECESITVRDEFSSGEHQEEHYE--------------------------------------RKKRRAHRQRNYFSR---KNKTNKPGVRYYRKVLHV--DNDDVLSIEGEDSYGQ--------VHSPGSFAGDFTSDDDRGF-----GPDAPRRPSGGFREAASNIVARVLSGGADQRPV 143
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A0D2U1W4_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2U1W4_CAPO3) HSP 1 Score: 116 bits (290), Expect = 5.020e-22 Identity = 78/257 (30.35%), Postives = 110/257 (42.80%), Query Frame = 1 Query: 1237 SSDHHTTLKGFAAWRESLPPAERLGIWQLLTACY---GEVVQGLSYEAATCSDSMGVGWVSRRPLATWEILARELGHSLGASDFLDETSDLLRPTGSW-NSFAIERAESRREVCQHIVGN------GDCFQPYQPTCGNGVLEPGEECDDDSPCCVPTECKLAFNARCSRGPSWWRTANDGDXXXXXXXGGWQGQCCSDSCQFLSSATLCEVPGG--ETGVCANGGCRRIHKPRLGSYETCVNPEAPDFNPCMEHYR 1971
++D + L F +WR++ P +E G+W L T C+ G V GL+Y CS + G VS W A E GH+ GA + G + + A+++ E+C I C+ PY PTCGNGV+EP EECD S CC CKL ++C+ G CCS +C+F T+C V G TGVC G C + + + + C NPC+ R
Sbjct: 355 TNDINKVLTDFTSWRQTRPASEPYGLWHLFTNCFPPSGTV--GLAYVGTLCSSTSNTG-VSSDSSQFWITHAHETGHNFGAQHTFGFGGIMDYGDGKYLGEYQFYTAQNKAEMCTEIQSTLASTSVPSCWTPYSPTCGNGVVEPSEECDVSSSCCK--NCKLTSGSQCATGT-----------------------CCS-ACKFSPPTTVCSVMDGVAATGVCVEGTCYKSGCSKYSNVKPCPAGGVSSTNPCLYRCR 582
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A0D2X394_CAPO3 (Thrombospondin n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X394_CAPO3) HSP 1 Score: 92.0 bits (227), Expect = 1.950e-14 Identity = 86/330 (26.06%), Postives = 123/330 (37.27%), Query Frame = 1 Query: 778 PECPSSPRVLQIGIAMDTGYFKASTGFGADQAGNLYGDEPDMTLDEAIDLAESEVQGIVSLVNVLYTDQLRLYIELKRLEIRTEVWREPPAEVVGEAEEGEATGKGIEERLNPQEARWNHEPLDHTRSRGRDRLDYGCPYSREDGMEFNPMSPSSDHHTTLKGFAAWRESLPPAERLGIWQLLTACY---GEVVQGLSYEAATCSDSMGVGWVSRRPLATWEILARELGHSLGASDFLDETSDLLRPTGSWNSFAIERAESRREVCQHIVGNG-----------DCFQPYQPTCGNGVLEPGEECDDDSPCCVPTECKLAFNA-RCSRGP 1722
P ++ + + +G A+D GY++ F N+ + V I+S N+LY QL + I L+IRT T WN P P S+ G+ N L F WR++ P E G++ LLT CY G V GL+ C+ G VS TW +A E+GH+ A D + G++ ++ EVC H+ + C+ YQ CGNG +EPGE+CDD S CC + CK A + CS GP
Sbjct: 280 PASVTTTQAINVGYAIDAGYYQ----FMGSSTTNV----------------QYSVVEIMSSTNMLYKAQLNVVIRTSTLDIRT------------------TTNSDT----------WNQIP--------------STPGSQSCGLTINQA---------LTSFQTWRQAKPATETNGLYHLLTYCYPSPGTV--GLATVGCLCNRRYG--GVSSTSSQTWITVAHEMGHNFNAQHTFDVGGLMDYGDGTYLGEYQFHPNNKAEVCSHMTASRAANYAGTYTVPSCWSNYQAICGNGNIEPGEDCDDTSACC--SNCKFANPSYECSGGP 532
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A482X6Z0_LAOST (Uncharacterized protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482X6Z0_LAOST) HSP 1 Score: 87.0 bits (214), Expect = 4.790e-13 Identity = 89/313 (28.43%), Postives = 125/313 (39.94%), Query Frame = 1 Query: 2488 VEYQGCFQD--RHFSRSLHGATRLFREELSVSKCGEWCASRGHSVMGLQNGRRCSCGEDFGDPRFPRL-SEDRCSIACSGDATQRCGGWGVSSIYSIYYDHVQDGQDYVGEHDKSHGSGGRSTILFGDGGSWDQDDGTNVGRQGLGAEAGNRIRWPWDEGKKRSVPFYYHDAAAAGGERIEGQDSPDTGTQEKEEEGEDEAETKG-----VIEHPLE-----YVGCFRDHLGALREYPGDAVYAFPESLTVNVCKTRCMAVGMPYFGVQFGRECHCGKRSPSND---PASNCVSPCVGDRTSVCGGAWANTVY 3378
+ Y GC+ D R T F E + C C S G LQ +C CG + P RL S+D C + C+GD +++CGG S+YS + YVG + +T L G TN + + N R+ Y G + I + +PD Q E G+D G V + +E Y+GCF+D R + G F SLTV C C + G Y G+Q+ EC C PSN +NC+ PC GD + +CGG W +V+
Sbjct: 135 LNYIGCYADFGSQEHRLFDKHTSDFHEGQTPHYCVGLCYSLGFGYAALQYNFQCFCGNNH--PPSERLRSDDECDLECTGDKSEKCGGHWKLSVYSTSITDLPALGRYVG----CYLDNVNNTRLLN--GIKRDFTTTNTPQLCVNFCLSNNYRY---------AGLQYGRECFCGNDEIITELAPDFQCQ-LECPGDDTRICGGHWRLAVYQLAIEFKSPQYLGCFKDETNETRLFKGYK-QNFYSSLTVQRCIDICRSKGFHYTGLQYRYECFCEDSKPSNSLEVNENNCLYPCSGDSSQMCGGDWRYSVH 428
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Match: A0A1Y1Y287_9FUNG (Zincin n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y287_9FUNG) HSP 1 Score: 84.0 bits (206), Expect = 3.070e-12 Identity = 97/400 (24.25%), Postives = 141/400 (35.25%), Query Frame = 1 Query: 763 PFGASPECPSSPRVLQIGIAMDTGYFKASTGFGADQAGNLYGDEPDMTLDEAIDLAESEVQGIVSLVNVLYTDQLRLYIELKRLEIRTEVWREPPAEVVGEAEEGEATGKGIEERLNPQEARWNHEPLDHTRSRGRDRLDYGCPYSREDGMEFNPMSPSSDHHTTLKGFAAWRESLPPAERLGIWQLLTACYGEVVQGLSYEAATCSDSM---------GVGWVSRRPLATWEILARELGHSLGAS-DFL--------------DETSD-----LLRPTGSWNSFAIERAESRREVCQHIVGNGDCFQP----YQPT-----CGNGVLEPGEECDD----DSPCCVPTECKLAFNARCSRGPSWWRTANDGDXXXXXXXGGWQGQCCSDSCQFLSSATLC 1836
P + CP+S +V+ +G+A D Y G I+ A + ++ + +Y + + + +LE+R+EV P + WN GC D N L F WR +L + G+W L+T C G+++ C S G G VS W+++A E+GH+ GA D + D T D L+ PT N+ S R++C +I G C + Y+ T CGNG+ EPGEECD D PCC P +CKL A CS +DGD +CC D CQ + T C
Sbjct: 156 PTEGTAGCPTSRKVMYMGVAADCAYVAYKKG---------------------IEEATKSILSNWNIASGVYESTFNIALGVVKLEVRSEVCPSTPDSTIA----------------------WNR----------------GC----SDAYNINDR---------LNDFTRWRGTLGE-DGTGLWHLMTKCSSGPKVGVAWLDQACVTSTKRQNNDYVSGTG-VSSATAMEWKVVAHEIGHNFGAKHDCINSQCPCTNCDCCPCDGTCDCKGQYLMNPTSDMNAKNFSPC-SIRDICSNIPNIGQCLEGLCKVYKSTIRESMCGNGIKEPGEECDCGTSVDCPCCTP-QCKLKPGAVCS---------DDGD------------ECCKD-CQLKPANTTC 457 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.539.1 >prot_C-linearis_contig10.539.1 ID=prot_C-linearis_contig10.539.1|Name=mRNA_C-linearis_contig10.539.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2768bp GAVGDGSRVRALDAKGEVLADRAPRLCTYEGHLPLGGWVRAVIRSPTSAMback to top mRNA from alignment at C-linearis_contig10:2043549..2072120- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.539.1 ID=mRNA_C-linearis_contig10.539.1|Name=mRNA_C-linearis_contig10.539.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=28572bp|location=Sequence derived from alignment at C-linearis_contig10:2043549..2072120- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:2043549..2072120- >mRNA_C-linearis_contig10.539.1 ID=mRNA_C-linearis_contig10.539.1|Name=mRNA_C-linearis_contig10.539.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=16608bp|location=Sequence derived from alignment at C-linearis_contig10:2043549..2072120- (Chordaria linearis ClinC8C monoicous)back to top |