mRNA_C-linearis_contig10.528.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 523 bits (1347), Expect = 1.300e-174 Identity = 291/539 (53.99%), Postives = 355/539 (65.86%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASD----------------------------------------------LRNGGESGSPIAVDPAPP---------------------------------RQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 V++T+DGWT +NDTYMS TCT+I+S+F AL LEC+KH GEDL A KAMI R+GL GR +A+TTDCE SMVK GR+L E++GVTH+ C CHRLESITS+AF GPGVSKALALARG+VTRYT+SSQA+DRL+Q+C I ++ NVVQDV TRWWST+ SI RL+ LRRPITEHE IDS P LLK+KDWEVL LVE LLKP M QKHLEASK VT LV Y+ADL+ LDEA+ +L+ S A ++ A AK+DV+LCA+AL+ D RWGD +VL +EGPRRQP FKKEQV ATA+ PRSKSLYGI+E E +VW A A AV++ + E A++ ++ G S SPI V+PA RQ+ESI+ RE++AFK TPG+ + +KG +V G PL+WWRVKAREYP LA+LARRVLCIPA QAQSERVFS AG + T TR+R+DPE+V LMVFL Sbjct: 6 VALTSDGWTPASNDTYMSFTCTYISSNFDLVALCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHS-CPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAI--EAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAXXXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEV-RGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFL 540
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE) HSP 1 Score: 440 bits (1131), Expect = 4.930e-148 Identity = 248/460 (53.91%), Postives = 308/460 (66.96%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 V++T+DGWTS +NDTYM TCT+I+S+F AL +EC+KH G TGEDL A KAMI R+GL R +A TTDCEPSMVK GR+L E++GVTH+ C CHRLESITS+AF GPGVSKALALAR +VTRY MSSQA+DRL+QM I ++ VVQDV TRWWST+ASI RLL LRRPITEHERIDSIP LLK+KDWEVL +VEPL KP + +QKH EASK VT SLVI Y+ADLR +LDEA+ +L+ A ++ A AK+DV + +R +V+ E P FKK+QV ATA+DPRSKSLYGI+E E +VW+AVA AV++ + + D ++ G S S I V+PA + A PG DK ++ ++ RVLCIPASQ QSERVFS AG + T TR+R+DPE+VELM+FL Sbjct: 50 VAVTSDGWTSASNDTYMYFTCTYISSNFDLVALCVECKKHGGRTTGEDLVEAVKAMIARNGLTSRTVATTTDCEPSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARRVVTRYNMSSQASDRLEQMRDIVQVERKKVVQDVETRWWSTYASICRLLSLRRPITEHERIDSIPPLLKEKDWEVLQVVEPLSKPFILSQKHREASKDVTVSLVIPYIADLRDELDEAVERLQ-AHACPAESIVAEAKKDVFFAPKHVRP---------TSVIVE-------PRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSLIPVEPAAXXXXXXXXXXDFAAASAVPG------DK-----------------QQSANASSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDPENVELMLFL 468
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 427 bits (1097), Expect = 8.040e-142 Identity = 245/504 (48.61%), Postives = 309/504 (61.31%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDG-VTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGS-PIAVDPAP----------PR-----------------------------QLESIVERELEAFKTTPGI---DMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 V+ITTDGWTS NN++YMSLT +I +++ L+L+C KH G TGEDLA M++RH L GRV+A TDCEPSM+K GR+L D ++H+ C HR+ES TS FNG + AL LAR LV RY SSQ A RL Q+CGI ++ L+V+QDV TRWWST A + RLLYL + I HE +D + LL D DWEVL L+EP+L+P M+ QK LE ++ VTGS+ IG MA+LR L+ A+ L+ + A E V AEAL DF +RWGDG N+L EG RRQP FK++QV+ATA+DPR+K LYGI + E VW+AVA+AAV+I L + + S P+ PAP PR QL +IV+ E+ AFK PGI DM + G K V +PL WR K EYP+LAALARRVL IP+SQAQSERVFS AG T TRSRL E+VEL+V+L Sbjct: 41 VAITTDGWTSRNNESYMSLTVAYIDYEWKLHHLSLDCAKHTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVFNGRSLG-ALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALGKHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMSAFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRVWDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYL 543
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 388 bits (997), Expect = 3.190e-129 Identity = 205/353 (58.07%), Postives = 251/353 (71.10%), Query Frame = 1 Query: 28 SPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPA 1086 S +NDTYM+ TCT+I+S+F AL LE +KH G TGEDL A KAMI R+GL GR +A TTDCEP MVK GR+L E++GV+H+ C CHR ESITS+AF GPGVSKALAL RG+VTRYTMSSQA++RL+QMC I ++ VVQDV TRWWST IDSIP LL +KDWEVL LVEPLL P M QKHLEASK VT SLV Y+ADLR +LDEA+ +L+ S A ++ A AK+D++ CA AL+ D RW DG +VL +EGPRRQP FKK+QV ATA+DPRSKSLYGI+E E +VW+AVA AV++ + + D ++ G S SPI V+PA Sbjct: 3 SASNDTYMTFTCTYISSNFDLVALCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTP----------------REIDSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYS-CPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKAT-EDTQSAGASSSPIPVEPA 337
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 379 bits (972), Expect = 2.960e-123 Identity = 229/480 (47.71%), Postives = 289/480 (60.21%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRIL-AEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTS--GAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDP------------APPR-------------------------------QLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERV 1302 V+ITTDGWTS +N++YMSLT +I +Q L+L C KH G GEDLA +MI+RHGL GRV A TDCEPSMVK GR+L + H+ C HR+ES TS FNG + ALA AR +V RY SSQ + RL GI ++S L+V+QDV TRWWS+ A I RLLYL + I HE D+I +L + DWEVL L+EP+L+P M+ QK LE +K VTGS+ + + +LR L+ A+ LR T G +A+T +AM E V+ AEAL +DF +RWGDG ++L EG RRQP FK +QV ATA+DPR+K LYGI + E VW+AVA AV+I A E +SD N SGS A P AP R QL S+V+ E+ +F+TTPGI + GK V DPL WWR + E+P LAALARRVL IP+SQA SERV Sbjct: 77 VAITTDGWTSRSNESYMSLTVAYIDVGWQLHHLSLNCTKHTGSTHGEDLAREITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNGKSLG-ALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAIADLRATDRFGISASTREAM--EAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDI--AAEKFSSD--NTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 251 bits (642), Expect = 8.260e-72 Identity = 157/367 (42.78%), Postives = 196/367 (53.41%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGV-THVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGI-CEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEA---LIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPA 1086 V IT+DGWTS NDTYMSLT T ITS ++ L+++C K EG TG+ LA KA + +HGL G+V AVTTDCEPSMVK GR+LA D V T + CC +RLES +S FNGP V K + LARGLVTRY SSQAADRLKQ + + V+QDVVT GSLV+ ++ DLR L++A L++L S A NT A V+ C +ALRDD+ RWGDG+N+L EGPRRQP FK V ATA+DPR+K YG+DE E+ +VWK V AV+I + + R + G A PA Sbjct: 41 VCITSDGWTSCANDTYMSLTFTLITSAWKLVTLSVDCSKSEGTTTGDALAAGIKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGLVTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDVVT----------------------------------------------------------------GSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAA----VMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQRTSSQQGPEAAAGPA 339
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 157 bits (397), Expect = 8.190e-41 Identity = 98/234 (41.88%), Postives = 119/234 (50.85%), Query Frame = 1 Query: 814 DFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPI---------------------------------AVDPAPPRQLE------------SIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 DF +RWGDG N+L EG RRQP FK QV ATA+DPR+K LYG+DE E+ +VWK V AV+I + + R + G AV A QL+ S V EL AFK + GI M DK G V DPL WWRV+ ++P LA LARRVL IPA+QA+SER+FS AG I T R+ L P VEL+V L Sbjct: 50 DFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLL 283
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI00165C184A (zinc finger BED domain-containing protein 1-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165C184A) HSP 1 Score: 139 bits (351), Expect = 6.680e-33 Identity = 129/489 (26.38%), Postives = 213/489 (43.56%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGLKGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRW----------WSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIG-LANETMA---SDLRNGGESGSPIA----VDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVL-----------GDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 VSIT DGWTS D+Y+++T ++ ++ ++ L+ R TG +LA + +++ L + A+ TD +M+ G A + HVRC H L + KA V + L R +VT + S QAA+ L+++ + + ++ DV TRW W H ++ + RR I E + ++ + D ++ + L+ P L K+ T S++ A L E + D+ C R DF R+ D +L + G +DPR K L +D + ++ + + V++ A ++ A + GG GSP VD +P + ++ +++ F TT +K +L GD LQWW+ + + P+L+ALA+ L IPA+ SERVFS AG I T+ RS L PEHV+ ++FL Sbjct: 7 VSITVDGWTSGATDSYITVTAHYVNEEWDMQSHVLQTRVFNESHTGVNLAALLQDVLREWNLGEKKPALVTDNARNMLVAG---AGAEITPHVRCVAHTLNLASQKALKVDRVYELLVKVRKVVTYFHKSPQAAEVLREIQSQLRLPNHKLIHDVCTRWNSSVDMLERFWEQHPALLNAMLSRR-IRRGEGLLAV----NEDDMTLIQEIIKLMSPVKVATTLLSEEKSPTISMIAPIQAKLHKHFSE-------------DNTDLPIIADMKQC---FRQDFFDRYLDLQELLYNASG-----------------LDPRFKDLAFLDVDSRDLIFMKITSEVVKMNEQAGDSAALYEGEADEGGSDGSPSRERRDVDASPSPKKKTAMDQLFGEFITTRTPLKTMREKAKDEILKYRERDSLELGGDVLQWWKGQV-DLPLLSALAKDYLSIPATSVSSERVFSSAGNIVTAQRSLLHPEHVDQLIFL 453
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI0020145D6B (E3 SUMO-protein ligase ZBED1 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020145D6B) HSP 1 Score: 137 bits (346), Expect = 1.720e-31 Identity = 123/486 (25.31%), Postives = 215/486 (44.24%), Query Frame = 1 Query: 1 VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRK-HEGHPTGEDLAVAAKAMIKRHGLKGRV-LAVTTDCEPSMVKTGRILAEDDGVT-HVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITEHERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESEGPRRQPNAFKKEQVFATAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQ-----------------------LESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 ++ITTDGWTS D+YM++T +IT+D+Q L+ R +E H + + +A+I + V + VTTD ++ E G + H+RC H + + +S+ L R +VT + S+ AA LK+ + ++ +VQDV TRW S+H + R L + + S+ +KD ++ L + +K + + + L+ K VT + M + + + +K R + + + +D+ A+ DF+ R+ D L + +TA+DPR KSL +DE ++K++ +E + E S + P P ++ L ++V+ E+ ++ + + +PL WW+ ++P LA LA+ L IPA+ SERVFS AG I T+ R+ L P++V++MVFL Sbjct: 172 IAITTDGWTSRATDSYMTITAHYITADWQIANPVLQTRAVYESHTSDHLSEILKEAVIDWKISRTNVPVPVTTDNARNIANA----VEAAGFSPHIRCFAHTVNLAAQRGMGVHHMSRLLGRVRKVVTFFHRSTTAAAVLKEKQVMLQLPLHKLVQDVATRWNSSHDMLERYLEQQAAVFSALTDKSVKKNIKD----IITLSDDDVKLAEDVVQVLKPLKTVTTLMSTEQMPTISMIVP---LKHRILASMKHSVSDSTVVKDIKT---AIAHDFEDRYPDSDRALIQFLH-------------MSTALDPRFKSLPFLDETTHDTIFKSLTERILEDCSQTVQAQTSTEEQSEIASSCSNCPPPAKRAPMMAELFGDFFSMEQAASSSKPLSAVVDEEVRHYRAVQSLSLES----------NPLMWWKDNQNQFPHLAKLAKMYLGIPATSVPSERVFSTAGDIVTAQRASLSPDNVDMMVFL 620
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Match: UPI001A7E9265 (E3 SUMO-protein ligase ZBED1-like n=4 Tax=Percomorphaceae TaxID=1489872 RepID=UPI001A7E9265) HSP 1 Score: 136 bits (342), Expect = 1.820e-31 Identity = 134/478 (28.03%), Postives = 212/478 (44.35%), Query Frame = 1 Query: 10 TTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAVAAKAMIKRHGL-KGRVLAVTTDCEPSMVKTGRILAEDDGVTHVRCCCHRLESITSKAFNGPGVSKALALARGLVTRYTMSSQAADRLKQMCGICEISSLNVVQDVVTRWWSTHASIARLLYLRRPITE------HERIDSIPSLLKDKDWEVLVLVEPLLKPSMETQKHLEASKAVTGSLVIGYMADLRLDLDEALIKLRNTSGAAANTVKAMAKEDVVLCAEALRDDFDSRWGDGYNVLTESE--------GPRRQPNAFKKEQVFA------TAMDPRSKSLYGIDEVEQPEVWKAVAAAAVEIGLANETMASDLRNGGESGSPIAVDPAPPRQLESIVERELEAFKTTPGIDMLGVDKGGKVVLGDPLQWWRVKAREYPMLAALARRVLCIPASQAQSERVFSIAGQIATSTRSRLDPEHVELMVFL 1380 TTD W+S + Y SLT +IT D EA +L+ TGE++A + + L + ++ +TTD +MVK ++ + T ++C HRL A VS+A+ L + LV ++ S + L + ++ +++ + TRW S IAR+L + I++ H R IP+ +D EVL + L P E L + V+ I Y+ + ++ L TS V A+ ED L +++ + D Y+ L E PR + + + A T M ++ + ++ + E + +A G A +T+ S + S A P LE +VE EL ++ TP ID G D DPL WW+V +P L +AR+ LC+PA+ A SER+FS G I T TRS L P V+++VFL Sbjct: 60 TTDMWSSRTAEPYQSLTVHYITEDLHLEARSLQTAYFPKDHTGENIAAGLREGLACWDLPEDNLVCITTDNASNMVKAAQL----NEWTRLQCFGHRLHLAIENAIKDGRVSRAIGLCKKLVGHFSHSWKKKAALTEAQKELKLPEHSLITECPTRWGSKEKMIARVLEQMKAISQVLTGDRHAR-SLIPTW---QDAEVLESIHKALHPLSEFTDALSGEEYVS----ISYL--------KPVLHLLATS------VLAVDAEDTDL-TRSIKTKVLAYLNDKYSDLNTQELLDVASFMDPRFKTQYISADNLPAIKARLKTEMVESARRTHNQEKRSRTETAQNSPSAQASGGKAKKTLGSLFKTSAASS-------ALPLPLEDVVEAELNSYLLTPVID--GED--------DPLAWWKVHNIHFPRLCKMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKPAKVDMLVFL 493 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.528.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.528.1 >prot_C-linearis_contig10.528.1 ID=prot_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=460bp VSITTDGWTSPNNDTYMSLTCTFITSDFQPEALTLECRKHEGHPTGEDLAback to top mRNA from alignment at C-linearis_contig10:1836478..1837938+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.528.1 ID=mRNA_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1461bp|location=Sequence derived from alignment at C-linearis_contig10:1836478..1837938+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1836478..1837938+ >mRNA_C-linearis_contig10.528.1 ID=mRNA_C-linearis_contig10.528.1|Name=mRNA_C-linearis_contig10.528.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2760bp|location=Sequence derived from alignment at C-linearis_contig10:1836478..1837938+ (Chordaria linearis ClinC8C monoicous)back to top |