Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 290 |
| Cds size | 288 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927322.897726-CDS-C-linearis_contig10:1753161..1753218 | 1622927322.897726-CDS-C-linearis_contig10:1753161..1753218 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1753162..1753218 + |
| 1690879626.1041746-CDS-C-linearis_contig10:1753161..1753218 | 1690879626.1041746-CDS-C-linearis_contig10:1753161..1753218 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1753162..1753218 + |
| 1622927322.9076831-CDS-C-linearis_contig10:1753329..1753502 | 1622927322.9076831-CDS-C-linearis_contig10:1753329..1753502 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1753330..1753502 + |
| 1690879626.1225805-CDS-C-linearis_contig10:1753329..1753502 | 1690879626.1225805-CDS-C-linearis_contig10:1753329..1753502 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1753330..1753502 + |
| 1622927322.9196649-CDS-C-linearis_contig10:1754129..1754187 | 1622927322.9196649-CDS-C-linearis_contig10:1754129..1754187 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1754130..1754187 + |
| 1690879626.1307626-CDS-C-linearis_contig10:1754129..1754187 | 1690879626.1307626-CDS-C-linearis_contig10:1754129..1754187 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1754130..1754187 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.523.1 >prot_C-linearis_contig10.523.1 ID=prot_C-linearis_contig10.523.1|Name=mRNA_C-linearis_contig10.523.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=96bp
EEGGSSDQQEVETLHPFVQVRPASTQPAVGVRQVGRTGRPIGFQRGGVVP
CKVVVAGQCRYTTRLRHRVAALLENRRLPVGRHIGRRPLPPGHRTP back to topmRNA from alignment at C-linearis_contig10:1753162..1754187+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.523.1 ID=mRNA_C-linearis_contig10.523.1|Name=mRNA_C-linearis_contig10.523.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1026bp|location=Sequence derived from alignment at C-linearis_contig10:1753162..1754187+ (Chordaria linearis ClinC8C monoicous)
GAAGAAGGAGGGAGCTCTGACCAACAGGAGGTGGAAACTCTCCATCCGTT
CGTACAGGTAAAGTTGCGAGACGTTTGGTTCTCGAGTTTGTATTTTTGAT
GTGTTCACAAGGTGCCGTTTCCGAAATTCAAACCGTTTGAAGTGAGCGCG
GGTTGTTGCTTCCTCTAGGTTCGGCCAGCATCTACACAGCCGGCGGTGGG
GGTGAGACAAGTGGGGCGAACTGGCAGGCCTATTGGGTTTCAACGTGGTG
GAGTGGTGCCCTGCAAAGTTGTTGTTGCCGGGCAGTGTCGCTATACAACA
CGGCTTCGCCACAGGGTGGCGGCACTCCTCGAGAACAGGAGGTGCGAATT
CACCCTCTCATAATCTTGCCTGCCGCCGCCAAACTCTTGTGATCGACAAG
CGCCTATTGCACCCAGACGACAGTGCCCTAGCCTAGGAGAGAAGCTGTGG
CGTTGTGTTTGCGAGGTGGTAGGGTACCAAGCTGGCGGTTACTGTCCTTG
TCCAAAGTACGCGGCCGTACCGACACACTCGCTCGCGCTTATGGTACGCT
GCAGGCGCCTTGTTGGTGTGTCCGTCTGCTGTACGTAAAATGGTCAACCG
CCCTTTCACCGTGCGTGCTTTTGGGCCAAGCACGCGTTGTGAAGGAGTTG
ATACTGTCGAGGGGGGAGATAGATGAAAGCACCGAAAACAGAGGAGATGG
GGGGATGAAGCTCTCGAGCGGTTCTCTCCCTCTCCCTCCCTCTGTGACAC
AACACGCTGGGCTGCTTTCCCCCACAGCCGAGTGCTGACTGTACGTGCGT
ATGTAGCATCGTACACGTTCCTTTTCCTTGATCTGCACCCCTTTCCGTCC
GCATTCGACCGTAACCCCCCCCACCGAGCAGGCGCGCTTCCCGGGCATCA
CAACAGAGGTCAAACGATCGTTTCGATCGTCCTTCCCTTCCCCTCTCCCG
CAACTCTCGCCCCAGCAGGCTACCGGTAGGCAGGCACATCGGTAGACGAC
CCTTGCCGCCTGGACACCGGACACCT back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1753162..1754187+ >mRNA_C-linearis_contig10.523.1 ID=mRNA_C-linearis_contig10.523.1|Name=mRNA_C-linearis_contig10.523.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at C-linearis_contig10:1753162..1754187+ (Chordaria linearis ClinC8C monoicous)
GAAGAAGGAGGGAGCTCTGACCAACAGGAGGTGGAAACTCTCCATCCGTT
CGTACAGGAAGAAGGAGGGAGCTCTGACCAACAGGAGGTGGAAACTCTCC
ATCCGTTCGTACAGGTTCGGCCAGCATCTACACAGCCGGCGGTGGGGGTG
AGACAAGTGGGGCGAACTGGCAGGCCTATTGGGTTTCAACGTGGTGGAGT
GGTGCCCTGCAAAGTTGTTGTTGCCGGGCAGTGTCGCTATACAACACGGC
TTCGCCACAGGGTGGCGGCACTCCTCGAGAACAGGAGGTTCGGCCAGCAT
CTACACAGCCGGCGGTGGGGGTGAGACAAGTGGGGCGAACTGGCAGGCCT
ATTGGGTTTCAACGTGGTGGAGTGGTGCCCTGCAAAGTTGTTGTTGCCGG
GCAGTGTCGCTATACAACACGGCTTCGCCACAGGGTGGCGGCACTCCTCG
AGAACAGGAGGCTACCGGTAGGCAGGCACATCGGTAGACGACCCTTGCCG
CCTGGACACCGGACACCTGCTACCGGTAGGCAGGCACATCGGTAGACGAC
CCTTGCCGCCTGGACACCGGACACCT back to top
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