Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | mitochondrion |
Exons | 1 |
Model size | 707 |
Cds size | 414 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.6551812-UTR-C-linearis_contig10:1694656..1694753 | 1622927325.6551812-UTR-C-linearis_contig10:1694656..1694753 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1694657..1694753 + |
1690879627.6134133-UTR-C-linearis_contig10:1694656..1694753 | 1690879627.6134133-UTR-C-linearis_contig10:1694656..1694753 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1694657..1694753 + |
1622927325.6788075-UTR-C-linearis_contig10:1695167..1695363 | 1622927325.6788075-UTR-C-linearis_contig10:1695167..1695363 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1695168..1695363 + |
1690879627.6345656-UTR-C-linearis_contig10:1695167..1695363 | 1690879627.6345656-UTR-C-linearis_contig10:1695167..1695363 | Chordaria linearis ClinC8C monoicous | UTR | C-linearis_contig10 1695168..1695363 + |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622927325.6672256-CDS-C-linearis_contig10:1694753..1695167 | 1622927325.6672256-CDS-C-linearis_contig10:1694753..1695167 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1694754..1695167 + |
1690879627.625935-CDS-C-linearis_contig10:1694753..1695167 | 1690879627.625935-CDS-C-linearis_contig10:1694753..1695167 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 1694754..1695167 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.517.1 >prot_C-linearis_contig10.517.1 ID=prot_C-linearis_contig10.517.1|Name=mRNA_C-linearis_contig10.517.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=138bp
MRYLPSSKVTTRFESFAASCSSFCRVWRSSCISRYVRVDSISSYIAAARS ALTPGPSAVLGPGTKISYERQHQQKIMCCVHVSWGRPLKLYASVPLPANR SIVYHGVTLAMGRVYVNNTLRRANARMVDLGLCVRRV* back to topmRNA from alignment at C-linearis_contig10:1694657..1695363+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.517.1 ID=mRNA_C-linearis_contig10.517.1|Name=mRNA_C-linearis_contig10.517.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=707bp|location=Sequence derived from alignment at C-linearis_contig10:1694657..1695363+ (Chordaria linearis ClinC8C monoicous) CTCGAAGAATCAGGCAAAAAGCGGCGACACAAGAAAACACACCTCTTTCA
AGATACGGAAGCACAACCCTGCCAAATGTTGATGTTATCACACGCGGATG
CGATATCTTCCGTCATCTAAGGTAACAACCCGGTTCGAAAGCTTCGCCGC
CAGCTGCAGCTCTTTCTGTCGCGTGTGGCGTAGCAGCTGCATTTCGCGTT
ATGTTCGTGTGGACTCCATTTCTTCATACATAGCGGCGGCGCGTTCTGCT
TTGACCCCCGGCCCATCAGCTGTTTTGGGACCGGGGACCAAGATCTCGTA
TGAGAGGCAACACCAGCAGAAAATCATGTGTTGTGTGCATGTGTCCTGGG
GTAGGCCACTGAAACTCTACGCATCTGTTCCTCTCCCCGCGAACAGGTCG
ATTGTGTACCACGGCGTTACTTTAGCGATGGGTCGTGTGTACGTAAACAA
CACGTTGCGCCGGGCAAATGCCCGGATGGTTGACTTGGGTCTGTGCGTCA
GGCGCGTCTGACTCCTAGCTCCACGAGGCAGCGCGGGCCTCTTGGTCGTT
GCTGACAACAAATACTGCTGTAGCCTAGCGCACCGCTTCTTGTAGATCAC
GTAACTCCAACCAAACCCCACCAGTGAGGTGAGAGAGGGAGAGGAGAGGA
GGCTGGGATGTCGGAGCTGAGCTGTTGTACCCGAATAGGAGAGAGCTGAG
TTTGACA back to topCoding sequence (CDS) from alignment at C-linearis_contig10:1694657..1695363+ >mRNA_C-linearis_contig10.517.1 ID=mRNA_C-linearis_contig10.517.1|Name=mRNA_C-linearis_contig10.517.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=828bp|location=Sequence derived from alignment at C-linearis_contig10:1694657..1695363+ (Chordaria linearis ClinC8C monoicous) ATGCGATATCTTCCGTCATCTAAGGTAACAACCCGGTTCGAAAGCTTCGC CGCCAGCTGCAGCTCTTTCTGTCGCGTGTGGCGTAGCAGCTGCATTTCGC GTTATGTTCGTGTGGACTCCATTTCTTCATACATAGCGGCGGCGCGTTCT GCTTTGACCCCCGGCCCATCAGCTGTTTTGGGACCGGGGACCAAGATCTC GTATGAGAGGCAACACCAGCAGAAAATCATGTGTTGTGTGCATGTGTCCT GGGGTAGGCCACTGAAACTCTACGCATCTGTTCCTCTCCCCGCGAACAGG TCGATTGTGTACCACGGCGTTACTTTAGCGATGGGTCGTGTGTACGTAAA CAACACGTTGCGCCGGGCAAATGCCCGGATGGTTGACTTGGGTCTGTGCG TCAGGCGCGTCTGAATGCGATATCTTCCGTCATCTAAGGTAACAACCCGG TTCGAAAGCTTCGCCGCCAGCTGCAGCTCTTTCTGTCGCGTGTGGCGTAG CAGCTGCATTTCGCGTTATGTTCGTGTGGACTCCATTTCTTCATACATAG CGGCGGCGCGTTCTGCTTTGACCCCCGGCCCATCAGCTGTTTTGGGACCG GGGACCAAGATCTCGTATGAGAGGCAACACCAGCAGAAAATCATGTGTTG TGTGCATGTGTCCTGGGGTAGGCCACTGAAACTCTACGCATCTGTTCCTC TCCCCGCGAACAGGTCGATTGTGTACCACGGCGTTACTTTAGCGATGGGT CGTGTGTACGTAAACAACACGTTGCGCCGGGCAAATGCCCGGATGGTTGA CTTGGGTCTGTGCGTCAGGCGCGTCTGA back to top
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