mRNA_C-linearis_contig10.508.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 607 bits (1564), Expect = 9.200e-190 Identity = 358/694 (51.59%), Postives = 414/694 (59.65%), Query Frame = 2 Query: 479 TTESNPEKLAALHQRCAHIAACFIVKCR*GSPELDVAPLEDCVKAVEKLVSRCSRRSTLSRVLKASSDKDEVLRLKERIRELEGDLSLAGIAILVGVTRSCLISVRYEPCLLVYFKIRGVASGLYRT*FCTLGYVLPRCIVAFVTTTSTTAWCLPRPGERSVR----THDHGSWLLKLRWFSDFQESCPTTHVALSLCVVHCLVGTGEYPASGEPRSSNCVSAKYPSATPEAADQASPSPQGHADTQELVR*TYCSAVMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGARAGAIFLRWRR 2548 T + NPE L LHQRC +I ACFIVKCR G ELDVAPLEDCV AVEK V R +R +SRVLKA DK ++++LKER+R+LEGDLSLAGIA L + +PC V F + +G + T T LP+P + T H SW ++ R V +TV++AL DGGP L GLV DSG+GK TAAS IV S VRE F DGIVWL +N V ++LP L+ +L M+ EDI G VG RP+ DDG AY+KQ++E G GG+ CL+VADNVWE +VVS+LLETGMWILLSTRD ELV NGE VGVDELS+ +A S+LRRAAEL PE LPDDA D++ELC R+AMDLAFVGRWSTVRGRQDRTAWS AA KV AEM K +N E R IL AGFEDLAIGSDDERVQRL L L VLPDGHAFTVKDAAVLL D+ P +EDEASV GVV+ LERWTII S TY MHDAHS+FAR SL D G VRRPA+KR ISSL ALR +R Y + W GV+R GGDGW TTRPY LE +DES L R+++EAVA F EAQED GA WRR Sbjct: 56 TVKRNPEDLTVLHQRCTYITACFIVKCRHGYTELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKY-----LIADPKPCSPVAFAFQE-----------RMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERR-----------------------------------------------------------------------------NVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKVRAEMDKGGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEATYRMHDAHSNFARESLMDRGDVRRPAIKRLVRSISSLEALRSINR--YTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANR-----TWRR 649
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 548 bits (1413), Expect = 2.100e-168 Identity = 331/689 (48.04%), Postives = 407/689 (59.07%), Query Frame = 2 Query: 485 ESNPEKLAALHQRCAHIAACFIVKCR*GS-PELDVAPLEDCVKAVEKLVSRCSRRSTLSRVLKASSDKDEVLRLKERIRELEGDLSLAGIAILVGVTRSCLISVRYEPCLLVYFKIRGVASGLYRT*FCTLGYVLPRCIVAFVTTTSTTAWCLPRPGERSVRTHDHGSWLLKLRWFSDFQESCPTTHVALSLCVVHCLVGTGEYPASGEPRSSNCVSAKYPSATPEAADQASPSPQGHADTQELVR*TYCSAVMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*M---------HDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGARA 2521 ++N E+L L++RC ++ AC +VK R S E+D+ P+E+C++A +LV RC R ++RVL ASSDK+E+ R+K IR+LE DLSLAG+AIL G T V R G T + + L + T L AK P ATP V Y VM+ V+EAL GGP L GLV DSGSGK TAAS IVRS +VR+AF DG+VWL++N ++ LPSL+ +L M+ E++ G RPA DDGAAYIK+++++G GG+ CL+VADNVWE+EVV KLLETGMW+LLSTRD ELVVG GE VGVDE+S+V+A S+LR+A+ELPPE LPDDA D++ELC R+AMDLAFVGRWSTVRGR DRTAWS AAGKV AEM KIEG+ + V + R+ +L AGFEDLA GSDDERVQRL L L VLPDG FTVKDAAVLL D+ PS+EDEAS AGVV+ILERW+++ S Y M HDAHS FAR L D G VRRPA+ RWT ISSL LR + + D WLGVE+ GGDGW +TRPY L M++S PLL SV AVA F +ED E A A Sbjct: 65 QNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVE-------------------------------------------------RMGTNQAATQE-----MILANTESIIDRLSKTPAKL---------------------------AKIPKATP-------------IRKSWHVERLY---VMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGG---RRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIEGERVSGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMDRGDVRRPALVRWTRNISSLDTLRSVRW--HDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLL-PTSVVAVAKFQRHEEDWEEAIA 650
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 520 bits (1339), Expect = 1.070e-159 Identity = 313/671 (46.65%), Postives = 388/671 (57.82%), Query Frame = 2 Query: 506 AALHQRCAHIAACFIVKCR*GSPELDVAPLEDCVKAVEKLVSRCSRRSTLSRVLKASSDKDEVLRLKERIRELEGDLSLAGIAILVGVTRSCLISVRYEPCLLVYFKIRGVASGLYRT*FCTLGYVLPRCIVAFVTTTSTTAWCLPRPGERSVRTHDHGSWLLKLRWFSDFQESCPTTHVALSLCVVHCLVGTGEYPASGEPRSSNCVSAKYPSATPEAADQASPSPQGHADTQELVR*TYCSAVMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELV-VGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGA 2515 AAL+QRC +I C IV+CR GS L PL +CV AV V RCSRR LSRVLKA+ DK+E+ LK+R+ +LEGDL LAGIA + G V LL + + S +++ HD ++ VG A P+ TP H + + ++R V +AL G+GGP L GLV DSGSGK TAA+ IVRST+VREAF DGIVWLS+N E L +L+ L ++ EDI G VG RPA DDGAAY +QR++ G GG+ CL+VADNVWE+ V+SKLLETGMW+LLSTRD LV E G VGVDELS+ DA S+LRRA+EL PEL LPD+A ++VELC R+AMD+AFVGRWSTVRGR DRTAWS AA KV + KIE ++ V + R+ +L AGFEDLAIGSDDER+ RL L L VLPDGHAFT KDA LL D++P EDE S ++ LERW+ + +E Y MHDAHS FAR + D GYVR+PAVKRWT +SSL LR FD +V+ WL V R GG+ W RPY L MDES PLLL+ S++++ F +AQ D + A Sbjct: 51 AALYQRCTYITGCVIVRCRKGSSGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGG-------KVEDLKALLEHVDTKQALSH-----------------------------------SQTLANHD----------------------------IMFARVGISPE-----------TLATVPAGTPARKSW-------HVERRHVMR---------AVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRS---KIERSRVSDNVWDIRAVRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWSALRTEGGAYRMHDAHSGFARDCVMDRGYVRKPAVKRWTLRLSSLDVLRSFDD-PFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLK-SLQSLGWFQDAQGDWQSA 619
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 504 bits (1299), Expect = 2.230e-153 Identity = 266/437 (60.87%), Postives = 312/437 (71.40%), Query Frame = 2 Query: 1238 VMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGARAGAIFLRWRR 2548 VMDTV+E L DGGP L GLV SGSGK T AS VRST+V+EAF DGI WLS+N +E L SL+ +L +++EDI VG RP + DD AAYI+QR++KG GG++ CL+VADNVWE+EVVSKLLETGMW+LLSTR++ LV +GE VGVDELS+ DA S+LRRAAELPP+ +P DA D++ELC R+AMDLAFVGRWSTVRGRQDR AWS A KV EM K+ A+ + + R+ IL AGFEDLAIGSDDERVQRL L L V PDGHAFTV+DAAVLL D+ P +EDEASVA VVD LERWT++ SE Y MHDAHS FAR +L DHGYVRRPAVKRW + IS L LR D YV+ WL VE GGDGW +R Y L MD L RQ++ A+A EA ED EGA WRR Sbjct: 53 VMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKVGSGDASEKLAETRDARRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGAYRMHDAHSIFARETLMDHGYVRRPAVKRWVSSISCLEVLRSSDP--YVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGAST-----TWRR 482
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 504 bits (1298), Expect = 3.260e-152 Identity = 265/436 (60.78%), Postives = 315/436 (72.25%), Query Frame = 2 Query: 1241 MDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGARAGAIFLRWRR 2548 M TV +AL G C+ L SGSGK T A+ IVRST+VREAF DGIVWL +N ++ LPSL+ +L M+HE+I G VG P+A +D A YIKQRLE+G GRR CL+VADNVWE++VVSKL+ETGMW+LLSTRD +V G+AV VDELS+ DA S+L+RAAELP E LPDDA D+++LC R+AMD+AFVGRWSTVRGR D +WS AA + EM K+ DP N+ E +K R+ IL GFEDLAIGSDDERVQRL L L V+PDGHAF++KDAAVLL D+SPS+EDEAS GVVD+LERW+II S TY MHDAH+ FAR L D G+VRRPA+KRWT ++SSL LR DR YV+ WL +ER GGDGW TRPY L M ES LL R + EAV F EAQEDLEGA A WRR Sbjct: 198 MATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIRTEMEKVGHDPDNDSAENIPAKRRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGTYRMHDAHTDFARECLLDRGHVRRPALKRWTRYLSSLDILRSTDR--YVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALL-RTTAEAVGWFQEAQEDLEGASAS-----WRR 625
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KJ30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE) HSP 1 Score: 456 bits (1173), Expect = 2.030e-135 Identity = 292/662 (44.11%), Postives = 363/662 (54.83%), Query Frame = 2 Query: 491 NPEKLAALHQRCAHIAACFIVKCR*GS-PELDVAPLEDCVKAVEKLVSRCSRRSTLSRVLKASSDKDEVLRLKERIRELEGDLSLAGIAILVGVTRSCLISVRYEPCLLVYFKIRGVASGLYRT*FCTLGYVLPRCIVAFVTTTSTTAWCLPRPGERSVRTHDHGSWLLKLRWFSDFQESCPTTHVALSLCVVHCLVGTGEYPASGEPRSSNCVSAKYPSATPEAADQASPSPQGHADTQELVR*TYCSAVMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPRTY*M---------HDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGP 2446 N E+L L++RC + C IVK R S E+DV+P+E+C++A +LV RC R ++RVL ASSDKD++ R+K IR+LE +LSLAG+AIL G T +V ER + Q + +A + + L T PA K P +TP H + ++V + V+E L DGGP L GLV DSGSGK TAAS IVRS + R LPSL+ +L M++E+I G RPA DDG AYIK+R+ +G GG CL V DNVWE+EVV +LLE GMW+LLSTRD ELV G GE V V+ELS+V+A S+LR+AAELPPE LPDDA D++ELC R+AMDLAF GR STVRGR DRTAWS AA KV EM+K E + V + R+ ++ AGF DLAIGSDDERVQRL L L VLPDG FTVKDAAVL+ D+ PS+EDEAS AGVV+ILERW+ + S Y M HDAHS FAR L D G V RPA+ RWT ISS+ LR + + D WLG E+ GGDGW TRPY L +++S P Sbjct: 41 NQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATV-----------------------------------------------------ERMAK----------------IQAATQEVILANTEIITDRLSKTPAKPA------------KIPKSTPIWKSW-------HVERFDVV---------ERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNEDR-------------------LPSLMLQLAHMVYEEIGG---RRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKVRTEMSKGECEGVRGTVVETRDARRKAVVQAGFGDLAIGSDDERVQRLYLSLAVLPDGRRFTVKDAAVLIYDRMPSAEDEASAAGVVEILERWSALCSIRGCYRMAWRGSHYVLHDAHSDFAREKLMDRGDVCRPALVRWTRNISSVDTLRAVRW--HEVRDLWLGAEQVGGDGWKITRPYEAALAGLEDSDP 581
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 442 bits (1136), Expect = 1.500e-134 Identity = 250/446 (56.05%), Postives = 304/446 (68.16%), Query Frame = 2 Query: 1238 VMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGA-AYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSE-PRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDLEGARAGAIFLRWRRESLGLTT 2569 V +TV EAL G+ GP L GLV DSG+GK TAA+ +VRS VRE+F DGIVWL++N + LPSL+ +L M+ EDI G VG P A AYIKQR+E G GG+ CL VADNVWE+EVVS LL+TGM +LLSTR ELV G G V +DELS DA S+LR AAELPP + LPDDA D+++LC R+AMDLAFVGRWSTVRGR DR AWS AA KV AE+AKIEGD ++V+ R+ IL AG EDLAIGSDDERVQRL L L VLPD V DAA+LL D+ P++EDE SVA V+D+LERW+++ S Y MHD S FAR SL D G VRR A++RW +ISSL +R ++ + WL VE+ GG+GWD T P L MD+ PLL ++S+ AVA EA ED E +A I W R SLG++T Sbjct: 117 VTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGD---DIVDGARGNRRKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLRSTWAYKYYMHDVQSEFARASLMDRGDVRRHALRRWVGYISSLDTVRSYNA--DYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLL-QESIAAVAKAHEAHEDWE--KASTI---WHR-SLGVST 550
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 266 bits (679), Expect = 5.260e-70 Identity = 174/444 (39.19%), Postives = 232/444 (52.25%), Query Frame = 2 Query: 1238 VMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIV------------------RSTKVREAFFDGIVWLSIN--ADVQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDG--AAYIKQRLE-KGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDP-ANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCD----QSPSSEDEASVAGVVDILERWTIIHSEPRTY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANF 2485 V+D VYE L P + GLV SGSGK T A+ IV R +VRE F DG+VWL + E +P+L+ +L + ED++ G P A G +A+I + KG R CL+VAD+VWE +++ +L TGMW+L ++RD +LV G V VD+LSK +A LLR AAEL LP AA V+E C RMA L FVGRWSTV+G D W+ A + AEM+ + G+ A E R IL AGF DLA + + L L L V+PDG AF K+AAV L D + S A VV LE+W ++ + MHDAHS FAR L VR A++RW F S L +R D + M+D W E GG+ W +RPY L+++ +S P + S++AV F Sbjct: 239 VVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAEMSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPL--LYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGNLFRMHDAHSDFARNKLKRSEDVRASALRRWRGFTSRLDTIRSMD--YFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECI-PSLKAVVEF 677
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 251 bits (640), Expect = 2.740e-64 Identity = 172/453 (37.97%), Postives = 238/453 (52.54%), Query Frame = 2 Query: 1238 VMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKV-----------------------REAFFDGIVWLSINAD--VQESLPSLVFRLVCMLHEDIEGGVGHRPAAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVE-LCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPS--SEDEASVAG-VVDILERWTIIHSEPR-TY*MHDAHSSFARGSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDESGPLLLRQSVEAVANFLEAQEDL 2506 V D VY+ L GD P + L SG+GK+TAA+ +VR+ KV R F DG+V+L + + LP L+ +L LHED+ P A + G +Y+K+ + + + CL+VAD+VWE VV+KL ETGMW+LL+TR E+V E E V VD+L+ +A +LR AAELP L D A V++ +C +AMD+AFVG WS VR D AW+ A K++ + + D A+ M + R IL AGF+ L + Q+L + + V PDG+AF V DAAVLL D P + VA ++ILERW ++ Y MHD H FAR + D G VR+P V+RWT+ IS L R +Y + D W VE GGDGW RPY EL +M +++ VA E ++ L Sbjct: 270 VEDEVYKILSGDE-PAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVLKKTAGAPEAGEKGESYVKKMMTR----TKKRCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIV--EPNEGVDVDQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVRED-ADGMNDS--QVKRLGILRAGFDYLG-EEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMNASGKYRMHDTHMDFARDKIRDQGDVRKPVVRRWTSRISRLDFA--VGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMGSD--CSKSHALDVVAELYEQEQKL 707
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 237 bits (604), Expect = 2.900e-60 Identity = 158/447 (35.35%), Postives = 236/447 (52.80%), Query Frame = 2 Query: 1154 PEAADQASPSPQGHADTQELVR*TYCSAVMDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWLSINADVQES--LPSLVFRLVCMLHEDIEGGVGHRP-----AAPDDGAAYIKQRLEKGRGGRRFMCLLVADNVWEQEVVSKLLETGMWILLSTRDVELVVGENGEAVGVDELSKVDARSLLRRAAELPPELCLPDDAADVVELCSRMAMDLAFVGRWSTVRGRQDRTAWSHAAGKVHAEMAKIEGDPANNMVEKGGSKHREVILCAGFEDLAIGSDDERVQRLCL*LGVLPDGHAFTVKDAAVLLCDQSPSSEDEASVAGVVDILERWTIIHSEPR--TY*MHDAHSSFAR---------GSLADHGYVRRPAVKRWTTFISSLAALRYFDR*IYVMMDFWLGVERSGGDGWDTTRPYVNELETMDES 2440 P+A +P P+G ++ V + V+ V E P + LV SG+GK + AS + +RE F DGIVW+ +S L +F L +HED+E +G P AA AAYIK R+E+G GR CL+VAD+VWE EV+ L ++GM L+++RD EL G+AV +D +++ + +L++AA+L P++A +++LC+ +AM+L FVGR S +R + D T W A ++ +E+ DP + + SK R+VI G++D GS D R + L L LG+LP+G+AF V DA++LL D + VV LERW ++ E TY MHDAHS FAR G AD VR AV+RW+ +S L + D + +++ W V+ D R Y +L ++D S Sbjct: 172 PQAERDQAPEPKGVWKPEDHVIRRH---VVARVCEYFDSANSPWMVALVGRSGAGKTSTASEMALHYHLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTAAAYIKTRMEQGNAGRGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEEEGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRSEIGAEVSDPGGDFDDWAASKRRDVIFRVGYKDF--GSGDVRNKILYLSLGILPNGYAFRVSDASLLLFGAC-QGRDMENAGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAAD---VRELAVRRWSAHLSCLKTVLSLD--VGLLLSLWQAVDTVSCDVGIRVRSYRAQLCSIDSS 607 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.508.1 >prot_C-linearis_contig10.508.1 ID=prot_C-linearis_contig10.508.1|Name=mRNA_C-linearis_contig10.508.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=269bp MDTVYEALIGDGGPCLEGLVRDSGSGKNTAASLIVRSTKVREAFFDGIVWback to top mRNA from alignment at C-linearis_contig10:1582428..1588176+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.508.1 ID=mRNA_C-linearis_contig10.508.1|Name=mRNA_C-linearis_contig10.508.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5749bp|location=Sequence derived from alignment at C-linearis_contig10:1582428..1588176+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1582428..1588176+ >mRNA_C-linearis_contig10.508.1 ID=mRNA_C-linearis_contig10.508.1|Name=mRNA_C-linearis_contig10.508.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at C-linearis_contig10:1582428..1588176+ (Chordaria linearis ClinC8C monoicous)back to top |