mRNA_C-linearis_contig10.506.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: D7FZX7_ECTSI (Agmatinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX7_ECTSI) HSP 1 Score: 672 bits (1735), Expect = 8.010e-240 Identity = 330/366 (90.16%), Postives = 346/366 (94.54%), Query Frame = 1 Query: 190 ACCD-TGNGKA--NGAETAGIKGVAAAVAPACDSVVGGETTRVVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDGVVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMAVARRNNKAATA 1278 ACC+ GNGKA +E+ G+KG A+A APA D VGGETTRVVSE G VGQPDPHVYPRY GFSTYARLPS+HEVSNFDVAVVGIPFD+GCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIP NPFNIPKAIDEIS+GVG++L RCDGVVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDI+ADE+LGMKTIFCSELDD+GFDWVA+KI+NRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMAVARRN A T+ Sbjct: 21 ACCNGMGNGKAAKGASESEGVKGTASAGAPAFDGAVGGETTRVVSEAGKVGQPDPHVYPRYCGFSTYARLPSIHEVSNFDVAVVGIPFDAGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPCNPFNIPKAIDEISTGVGNVLGRCDGVVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIVADEQLGMKTIFCSELDDNGFDWVANKIKNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMAVARRNKTATTS 386
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A5Q5BSX6_MYCSS (Agmatinase n=5 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A5Q5BSX6_MYCSS) HSP 1 Score: 397 bits (1021), Expect = 1.790e-132 Identity = 187/320 (58.44%), Postives = 244/320 (76.25%), Query Frame = 1 Query: 289 GGETTRVVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 GG V SETG++GQ D PRYAG +T+ARLP HEV ++D+AVVG+PFDSG TYRPGARFGP AIR ASRL++ Y+ +V PF QVVD GDI NPF+I A+DEI +GV LL+R + VV++GGDHTI+ P+L+A+++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ RS HVGIRGS+ D D++ D ELG + C ++D G D V +++ +RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+G NIV+ D+VEVAPAYD A++TA GAN+ +E+++LMA Sbjct: 5 GGHVQYVQSETGVLGQVDAQAVPRYAGIATFARLPQRHEVGDYDIAVVGVPFDSGVTYRPGARFGPSAIRQASRLLKPYHPALDVSPFAAAQVVDAGDIAANPFDIATAVDEIRAGVLGLLTRPEQRVVLLGGDHTIALPALQAVNEVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRASEQGLLVKDRSAHVGIRGSLYDRADLLEDAELGFTVVHCRDIDRIGVDGVIERVLDRVGDHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRGCNIVAADIVEVAPAYDQAEVTAVAGANLAYELITLMA 324
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A3S4RRW4_MYCCI (Putative agmatinase n=10 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A3S4RRW4_MYCCI) HSP 1 Score: 394 bits (1012), Expect = 4.100e-131 Identity = 187/320 (58.44%), Postives = 242/320 (75.62%), Query Frame = 1 Query: 292 GETTRVV-SETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 GE + V SETGM+GQ D PRYAG +T+ARLP HEV ++D+AVVG+PFD G TYRPGARFGP AIR ASRL++ Y+ +V PF QVVD GDI NPF+I A+DEI +GV LL+R + VV++GGDHTI+ PSL+A+++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ S HVGIRGS+ D D++ D ELG + C ++D G D V +++ RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+GLNIV+ D+VEVAPAYD A++TA AN+ +E+++LMA Sbjct: 5 GENMQYVRSETGMLGQVDAQAVPRYAGLATFARLPQRHEVDDYDIAVVGVPFDGGVTYRPGARFGPAAIRQASRLLKPYHPALDVSPFAQAQVVDAGDIAANPFDITVAVDEIRAGVRGLLTRPEQRVVLLGGDHTIALPSLQAVNEVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRASEQGLLVKDHSAHVGIRGSLYDRADLLEDAELGFTVVHCRDIDRIGVDGVIERVLERVGAHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRGLNIVAADIVEVAPAYDQAEVTAVAAANLAYELITLMA 324
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A1Q4HCR1_9MYCO (Agmatinase n=5 Tax=Mycobacterium diernhoferi TaxID=1801 RepID=A0A1Q4HCR1_9MYCO) HSP 1 Score: 394 bits (1011), Expect = 5.230e-131 Identity = 187/319 (58.62%), Postives = 236/319 (73.98%), Query Frame = 1 Query: 292 GETTRVVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 G V+S G GQ D PRYAG +T+ARLP + EV ++D+AVVG+PFDSG TYRPGARFGP AIR ASRL++ YN +V PF QVVD GDI NPFNI +A+D++ GV LL+R + VV++GGDHTI+ P+L+A++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA++ GL+ RS H+GIRGS+ D D++ DE LG + C +LD GFD +IR RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR M+GLNIV DVVEVAPAYD DITA AN+ +E+++LMA Sbjct: 2 GSQPYVLSAQGNTGQVDATAVPRYAGLATFARLPQLREVLDYDIAVVGVPFDSGVTYRPGARFGPAAIREASRLLKPYNPALDVSPFAQAQVVDAGDIAANPFNIDEAVDQVREGVAGLLTRPEQRVVMLGGDHTIALPALQAMNRVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRAVEQGLLVKDRSAHIGIRGSLYDRADLLDDESLGFTVVHCRDLDRIGFDGAVQRIRERVGDHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAILRGMRGLNIVGADVVEVAPAYDGGDITAVAAANLAYELITLMA 320
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A448J1Q4_MYCAU (Putative agmatinase n=1 Tax=Mycolicibacterium aurum TaxID=1791 RepID=A0A448J1Q4_MYCAU) HSP 1 Score: 391 bits (1005), Expect = 4.070e-130 Identity = 182/313 (58.15%), Postives = 236/313 (75.40%), Query Frame = 1 Query: 307 VVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLM 1242 V + G+ GQ D PRYAG +T+ARLP HEVS++D+AV G+PFDSG TYRPGARFGP AIR ASRL++ YN +V PF QVVD GDI NPF+I A+DEI +G+ L+SR + VV++GGDHTI+ P+L+A++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ RS HVGIRGS+ D D++ D ELG + C ++D G D V +++ NRVG PVY+S+D+DV DPAFAPGTGTPE+GG +SREL+ +LR+M+ L +V DVVEVAPAYDHA++TA GAN+ +E++SLM Sbjct: 7 VETTPGVFGQVDAQAVPRYAGIATFARLPQRHEVSDYDIAVAGVPFDSGVTYRPGARFGPAAIRQASRLLKPYNPALDVTPFAAAQVVDAGDIAANPFDITAAVDEIRAGIRGLISRPEQRVVLLGGDHTIALPALQAVNQVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRASEQGLLVKDRSAHVGIRGSLYDRSDLLEDAELGFTVVHCRDIDRIGVDGVIERVLNRVGDHPVYVSIDVDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRALTVVGADVVEVAPAYDHAEVTAVAGANLAYELISLM 319
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A7G8PJB5_9MYCO (Agmatinase n=5 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A7G8PJB5_9MYCO) HSP 1 Score: 388 bits (996), Expect = 9.290e-129 Identity = 183/314 (58.28%), Postives = 235/314 (74.84%), Query Frame = 1 Query: 307 VVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 V S G VGQ D V PRYAG +T+ARLP HEV++ D+AVVG+PFDSG TYRPGARFGP AIR ASRL++ Y+ ++ PF QVVD GDI NPF+I +A+D+I GV LL R + VV++GGDHTI+ P+L+A++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ S HVGIRGS+ D D++ DE LG + C ++D G D V ++IR RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+G+ IV DVVEVAPAYD+ ++TA AN+ +E++SLMA Sbjct: 6 VRSPAGKVGQVDAQVVPRYAGLATFARLPQRHEVTDHDIAVVGVPFDSGVTYRPGARFGPAAIRQASRLLKPYHPALDISPFAQAQVVDAGDISANPFDITEAVDQIRDGVAELLGRPEQRVVLLGGDHTIALPALQAVNQVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRAAEQGLLVKDHSAHVGIRGSLYDRADLLDDESLGFTIVHCRDIDRIGIDGVIERIRTRVGEHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRGMRIVGADVVEVAPAYDNGEVTAVAAANLAYELVSLMA 319
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A7I9ZHN6_9MYCO (Agmatinase n=3 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A7I9ZHN6_9MYCO) HSP 1 Score: 386 bits (992), Expect = 3.730e-128 Identity = 180/308 (58.44%), Postives = 234/308 (75.97%), Query Frame = 1 Query: 322 GMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLM 1242 G++GQ D PRYAG +T+ARLP HEVS++D+AV G PFDSG TYRPGARFGP AIR ASRL++ YN +V PF QVVD GDI NPF+I A+DEI +GV L++R + VV++GGDHTI+ P+L+A+++ GPV+LVHFD+H DTWD YFG CTHGTPF+ A + GL+ RS HVGIRGS+ D D++ D ELG + C ++D G D V +++ NRVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+GL I+ DVVEVAPAYDHA++TA AN+ +E++S+M Sbjct: 12 GVLGQVDARAVPRYAGIATFARLPQRHEVSDYDIAVAGAPFDSGVTYRPGARFGPAAIRQASRLLKPYNPALDVTPFAAAQVVDAGDIAANPFDITAAVDEIRAGVLGLITRPEQRVVLLGGDHTIALPALQAVNEVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRLASEQGLLVKDRSAHVGIRGSLYDRSDLLEDAELGFTVVHCRDIDRIGVDGVIERVLNRVGDHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRGLRIIGADVVEVAPAYDHAEVTAVAAANLAYELISIM 319
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: V5X8X9_MYCNE (Guanidinobutyrase n=4 Tax=Mycolicibacterium TaxID=1866885 RepID=V5X8X9_MYCNE) HSP 1 Score: 386 bits (992), Expect = 4.920e-128 Identity = 185/321 (57.63%), Postives = 235/321 (73.21%), Query Frame = 1 Query: 286 VGGETTRVVSETGMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 V G+ V S +G VGQ + PRYAG +TYARLP HEVS +D+AVVG+PFDSG TYRPGARFGP AIR ASRL++ YN ++ PF QVVD GDI NPF+I A+DE+ G+ +LL+ V+ GGDHTI+ P+L+A++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ S HVGIRGS+ D D++ DE LG + C ++D G D V ++IR RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+GL IV D+VEVAPAYD AD+TA ANI +E+++LMA Sbjct: 7 VDGQDRYVRSASGHVGQVNAQQVPRYAGLATYARLPQRHEVSRYDIAVVGVPFDSGVTYRPGARFGPAAIREASRLLKPYNPALDISPFAQAQVVDAGDIAANPFDIDAAVDEVREGIAALLTTPQQRVLTFGGDHTIALPALQAVNRVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRAAEQGLLVKGHSAHVGIRGSLYDRADLLDDESLGFTIVHCRDIDRIGIDGVIERIRERVGEHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAILRAMRGLQIVGADIVEVAPAYDSADVTAVAAANIGYELITLMA 327
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A5A7X317_9MYCO (Agmatinase n=3 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A5A7X317_9MYCO) HSP 1 Score: 385 bits (989), Expect = 1.060e-127 Identity = 179/308 (58.12%), Postives = 234/308 (75.97%), Query Frame = 1 Query: 322 GMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLM 1242 G++GQ D PRYAG +TYARLP HEV ++D+AVVG+PFDSG TYRPGARFGP AIR ASRL++ Y+ +V PF QVVD GDI NPF+I A+DEI G+ LL+R + VV++GGDHTI+ P+L+A+++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ S HVGIRGS+ D D++ D ELG + C ++D G D V +++ +RVG PVY+S+D+DV DPAFAPGTGTPE+GG +SREL+ +LR+M+ LNIV DVVEVAPAYD A++TA GAN+ +E+++LM Sbjct: 12 GILGQVDARAVPRYAGIATYARLPQRHEVDDYDIAVVGVPFDSGVTYRPGARFGPAAIRQASRLLKPYHPALDVTPFASAQVVDAGDIAANPFDIDAAVDEIREGILGLLTRPEQRVVLLGGDHTIALPALQAMNEVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRASEQGLLVKGHSAHVGIRGSLYDRADLLEDAELGFTVVHCRDIDRIGIDGVIERVLDRVGEHPVYVSIDVDVMDPAFAPGTGTPEIGGMTSRELVAVLRAMRSLNIVGADVVEVAPAYDQAEVTAVAGANLAYELITLM 319
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Match: A0A7I7RVL1_9MYCO (Agmatinase n=3 Tax=Mycolicibacterium TaxID=1866885 RepID=A0A7I7RVL1_9MYCO) HSP 1 Score: 384 bits (987), Expect = 2.610e-127 Identity = 182/309 (58.90%), Postives = 233/309 (75.40%), Query Frame = 1 Query: 322 GMVGQPDPHVYPRYAGFSTYARLPSVHEVSNFDVAVVGIPFDSGCTYRPGARFGPEAIRCASRLIRRYNMGTEVYPFRDMQVVDYGDIPVNPFNIPKAIDEISSGVGSLLSRCDG-VVIIGGDHTISYPSLKAISDKFGPVSLVHFDSHFDTWDEYFGEKCTHGTPFKRAIDDGLIDTSRSMHVGIRGSVNDHEDIIADEELGMKTIFCSELDDHGFDWVADKIRNRVGTGPVYLSLDIDVADPAFAPGTGTPEVGGFSSRELIRLLRSMKGLNIVSGDVVEVAPAYDHADITAQLGANIVFEILSLMA 1245 G+VGQ D PRYAG T+ARLP H+V + DVAVVG+PFDSG TYRPGARFGP AIR ASRL++ Y+ +V PF QVVD GDI NPF+I A+D+I GV LL+R + VV++GGDHTI+ P+L+A++ GPV+LVHFD+H DTWD YFG CTHGTPF+RA + GL+ RS HVGIRGS+ D D++ D ELG + C ++D G D V +++R RVG PVY+S+DIDV DPAFAPGTGTPE+GG +SREL+ +LR+M+GL IV DVVEV+PAYDHA++TA AN+ +E+++LMA Sbjct: 18 GIVGQVDARAVPRYAGIGTFARLPQRHDVEDHDVAVVGVPFDSGVTYRPGARFGPSAIRQASRLLKPYHPALDVSPFAAAQVVDAGDIAANPFDIAAAVDQIREGVLGLLTRPEQRVVLLGGDHTIALPALQAMNQVHGPVALVHFDAHLDTWDTYFGAPCTHGTPFRRASEQGLLVKDRSAHVGIRGSLYDRADLLEDAELGFTVVHCRDIDRIGVDGVIERMRERVGDHPVYVSIDIDVLDPAFAPGTGTPEIGGMTSRELVAVLRAMRGLRIVGADVVEVSPAYDHAEVTAVAAANLAYELVTLMA 326 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.506.1 >prot_C-linearis_contig10.506.1 ID=prot_C-linearis_contig10.506.1|Name=mRNA_C-linearis_contig10.506.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=383bp MSQLVKSSASGVAVGKRGTACCDTGNGKANGAETAGIKGVAAAVAPACDSback to top mRNA from alignment at C-linearis_contig10:1566073..1571524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.506.1 ID=mRNA_C-linearis_contig10.506.1|Name=mRNA_C-linearis_contig10.506.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5452bp|location=Sequence derived from alignment at C-linearis_contig10:1566073..1571524- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1566073..1571524- >mRNA_C-linearis_contig10.506.1 ID=mRNA_C-linearis_contig10.506.1|Name=mRNA_C-linearis_contig10.506.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2298bp|location=Sequence derived from alignment at C-linearis_contig10:1566073..1571524- (Chordaria linearis ClinC8C monoicous)back to top |