mRNA_C-linearis_contig10.499.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI) HSP 1 Score: 1158 bits (2995), Expect = 0.000e+0 Identity = 666/887 (75.08%), Postives = 708/887 (79.82%), Query Frame = 2 Query: 665 NQDADESGH-PLSGIPFALPPQVSRVPTPLKPSGRSRSASIESAAEFFG-----GPKAHRPGDPRDAPNAPAAAAPTSADAGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRLGGAVT-----GRVPRKHQEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXXGYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDSVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAFLKERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFKPSGAVGVPS 3292 +Q AD+S SGIPFALP +R + P+GRSRSASIESAAEFF G KA+ D A A ++A A +N E GA T GRVPRKHQEQRRGLPIFAHKA IIRAVK+HQTVVVVGETGSGKSTQIPQFLYEAGIT GGAGW G+ G + A G L+ACTQPRRVAAVTVAKRVA+EV XXXXXX YTVRFDDRTS+STRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRP LK DSVSLHVPGRTHPVDVMY TEDQDDYLDACL+TCLQIHE+E+GDGDVLVFLPGQDDIEALSQLLRENLA LRAEKSRELAAXXXXXXXXXXXXXXXX DDL+G GDGLLRE+MVCPVFAALPQEQQLEAFEPAP+GTRKFVLATNIAETSITINGIR+VVDSGKVKVRSFQ STGMEFLRS+DVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAP PEILRVNLAQVVLQLKVMGI+DPSTFDYVTAPSRAALLKAL +LAMLGALDKS RVT DG++MAALPLDPAFAHLL+RS EPRFSCVKE+LTTVACLSAENLLF PPKEEA+R A++AH++F+AYEGDLPTLLR++E+FLKERKDP WCRRNFVNGRSVARA+DVRQQLAKILRERLRIDPEESCGAE SQYLRCLVAGLFTNVALRQPSTSGG RGCYRTV+GGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVD+SWLRELVPQ+FKPSGAVGV S Sbjct: 207 SQGADDSEEVEPSGIPFALPMPGARATPSINPTGRSRSASIESAAEFFSTKGLSGDKANGTIDDGRGDTA----AKSNAGAISNGSVHQGADSGHGLGRRKRE-----------------EGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKDHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGWIPGGESGEATTAARGSGKKRGRAPSQEDVFKGSSSSGPDKRGFQ-------GGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPDLK------------------DSVSLHVPGRTHPVDVMYATEDQDDYLDACLMTCLQIHEDEEGDGDVLVFLPGQDDIEALSQLLRENLATLRAEKSRELAAXXXXXXXXXXXXXXXXPRRRGG--DDLRGQGDGLLRETMVCPVFAALPQEQQLEAFEPAPRGTRKFVLATNIAETSITINGIRYVVDSGKVKVRSFQASTGMEFLRSQDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPIPEILRVNLAQVVLQLKVMGIDDPSTFDYVTAPSRAALLKALKTLAMLGALDKSARVTPDGRKMAALPLDPAFAHLLVRSAEPRFSCVKEVLTTVACLSAENLLFYPPKEEAKRAANEAHQSFSAYEGDLPTLLRIYESFLKERKDPEWCRRNFVNGRSVARAVDVRQQLAKILRERLRIDPEESCGAETSQYLRCLVAGLFTNVALRQPSTSGGGSRGCYRTVLGGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDSSWLRELVPQYFKPSGAVGVSS 1045
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA) HSP 1 Score: 686 bits (1771), Expect = 4.140e-230 Identity = 383/758 (50.53%), Postives = 487/758 (64.25%), Query Frame = 2 Query: 1040 RVPRKHQEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXXGYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDSVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAF---LKERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVG----RGCYRTVIGGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFKPSGAVGVPS 3292 R+PR+HQE RR LP+F H+ I+ AVK H+TVV+VGETGSGKSTQIPQ+LY+AG+ + K G+ + CTQPRRVAA+TVAKRVA E+ GY+VRFDD+TS STR+KY+TDGVLLREAM+DP+L +YS ++LDEAHERSL TDILFGLVR+LQ KRP DL RD+ L +PGRTHPV V Y E Q DY+DA L+TCLQIH EE GDVLVFLPG++DI+ L+ LLR+ LAKL E +E AA + A L+E +V VFAALPQEQQL AF PAP TRKFVLATNIAETSITI+G+R+V+D G VK RS GME L+ VSK+QA QRAGRAGREAPG CYR++ E ++L L + PEI RV+L+QVVLQLKV+GI+ FD+V+ PS AL+ AL SL +LG LD +G +T G+R+A LPL P F+HLL+ S EP F C E+L V+CLSA+N+ F P +E R A +HRAFA+ +GDLP L + EA+ + + + WC+++++N RS+ARA+D+R QLA ILR RL DPE SCGAE+ + LRC+ GL VA+RQP+ S VG CYRTV GG+E +HP+S L+ +NPP +C+V+ E+L TS+ ++K VTAVD +WL EL PQ F+ A P+ Sbjct: 28 RLPRQHQEVRRQLPVFQHRDNIVTAVKTHRTVVLVGETGSGKSTQIPQYLYDAGL---------ASKHKGSSGNGTLSPRT-----------------------------------ICCTQPRRVAAITVAKRVAEEMGSELGHTCGYSVRFDDQTSPSTRVKYVTDGVLLREAMADPMLKSYSVLILDEAHERSLQTDILFGLVRKLQDKRPN------------DL-----RDAAQLRIPGRTHPVQVYYAEESQPDYVDAALMTCLQIHAEE-APGDVLVFLPGREDIDNLALLLRDWLAKLHREALQEAAAVGAVVA-------------------ETPSAAAAQLQEGLVVKVFAALPQEQQLLAFTPAPPNTRKFVLATNIAETSITISGVRYVIDCGLVKQRSVVAGAGMEALKVVPVSKSQAQQRAGRAGREAPGACYRIYTESTFLALAQSTPPEIERVDLSQVVLQLKVIGIDKVDQFDFVSPPSPTALIAALESLYLLGTLDAAGDLTPHGRRIAQLPLAPTFSHLLLASAEPAFECTAEVLAAVSCLSADNVFFTPTDQEERACATASHRAFASADGDLPCLAGIFEAYKANMHKGQGGVWCKQHYLNARSLARALDIRSQLATILR-RLGGDPESSCGAEVQRLLRCIAKGLSLQVAVRQPAVSVAVGGQSSARCYRTVRGGKEVYLHPTSCLFGKNPPPRCLVYAEVLQTSKQYMKCVTAVDPAWLTELAPQVFRKQSAATAPA 703
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A6H5KJ10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ10_9PHAE) HSP 1 Score: 666 bits (1718), Expect = 4.710e-221 Identity = 404/598 (67.56%), Postives = 429/598 (71.74%), Query Frame = 2 Query: 635 QKKIKKRLKMNQDADESGH-PLSGIPFALPPQVSRVPTPLKPSGRSRSASIESAAEFFGGPKAHRPGDPRDAPNAPAAAAPTSADAGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVRLGGAVT-----GRVPRKHQEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXXGYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDSVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLEL 2410 +K +K K +Q D+S SGIPFALP +R +KP+GRSRSASIESAAEFF + A + A A+ E GA T GRVPRKHQEQRRGLPIFAHKA IIRAVK HQTVVVVGETGSGKSTQIPQFLYEAGIT GGAGW G + G + AA G L+ACTQPRRVAAVTVAKRVA+EV XXXXXX YTVRFDDRTS+STRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRP LKV+VMSATLDVDLFR FFRDSVSLHVPGR HPVD+MY TEDQDDYLDACL+TCLQIHE+EKGDGDVLVFLPGQDDIEALSQLLRENLA LRAEKSRELAA XXXXXXXX DDLQG GDGLLRESMVCPVFAALPQEQQLEAFEPAP+GTRKFVLATNIAETSITINGIR+VVDSGKVKVRSFQ STGMEFLRS+D+SKAQATQRAGRAGREAPGVCYRLFR+D + L Sbjct: 197 RKAKEKHQKKSQGTDDSEEVEPSGIPFALPMPGARATPSIKPTGRSRSASIESAAEFF----------------STKAVSGDKASGTADDGRGDTVAKGNEGAISNGSVHEGGEPGHSLGRRKREEGSGGVGAATAALGRGRVPRKHQEQRRGLPIFAHKADIIRAVKYHQTVVVVGETGSGKSTQIPQFLYEAGITRGGAGW-IPGWESGEATTAARGSGKKRGRAPSQEDVVKGSSSGGGDKRGFQ------GGLIACTQPRRVAAVTVAKRVAAEVGCXXXXXXXYTVRFDDRTSKSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPDLKVVVMSATLDVDLFRRFFRDSVSLHVPGRMHPVDIMYATEDQDDYLDACLMTCLQIHEDEKGDGDVLVFLPGQDDIEALSQLLRENLATLRAEKSRELAAAXXXXXXXXGDEEFQRPRGRGG--DDLQGQGDGLLRESMVCPVFAALPQEQQLEAFEPAPRGTRKFVLATNIAETSITINGIRYVVDSGKVKVRSFQASTGMEFLRSQDISKAQATQRAGRAGREAPGVCYRLFRQDVKISL 769
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: K8YVU8_NANGC (Deah (Asp-glu-ala-his) box polypeptide 35 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVU8_NANGC) HSP 1 Score: 599 bits (1545), Expect = 9.920e-196 Identity = 362/819 (44.20%), Postives = 470/819 (57.39%), Query Frame = 2 Query: 1049 RKHQEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXXGYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDS--------VSLH------------------------VPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKG----TRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGR---------------------------------------VTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKE------EARREADDAHRAFAAYEGDLPTLLRVHEAFLKERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFF 3262 R+HQ R+ LPI+ K ++ V+ H +VV+VGETGSGKSTQ+PQFL +AG G QG TPS L+ACTQPRRVAA+TVA RVA E+ GY VRFDD+T T IKYMTDGVLLREAM+DPLL+ Y+ I+LDEAHERSL TDILFGL+RR Q +R L+V+VMSATLDV++FR FF + H + GR + V+V Y E Q+D +DA + LQIHE E GD+LVFL GQ+DIEAL++LL E+ D GL E +CP+++AL E+Q +AF P PKG TRK +LATNIAETS+TINGIR VVD+G VKVR + PSTG++ L++ +++AQA QR GRAGREAPG CYRLF E ++ L P PEI RVNL QVVLQL MG++DP FDY++ PS AL +A +L LG + + G +T G+R+A+LPLDP +AH ++R++E C+ E LT V+ LSAEN+L+ P E R A AHRA AAY+GD+PTL+ ++E ++ +K WC +FVN R++ +A +VR+QL ++R RL +DP +SCG E +LR L AGLF NVA RQP+TS +G+ CY+ + GREA IHPSS L RNP +CVVFTE+L+TSR +I+ V+ VD + L+ELVPQFF Sbjct: 23 RQHQNARQQLPIWRQKTYVVETVRRHASVVLVGETGSGKSTQVPQFLLDAGFCAG-----IVEAQGSTPSPIRARK------------------------------------LIACTQPRRVAAITVAGRVAEEMGCALGQAVGYAVRFDDKTGPRTVIKYMTDGVLLREAMTDPLLTRYAVIILDEAHERSLQTDILFGLIRRAQREREDLRVVVMSATLDVEVFRRFFETGGRKEEKALIKRHGENGKHEKGKLSREGQASTVGVVRIEGRQYGVEVYYCEEAQEDSIDAACLAVLQIHESEPLPGDILVFLSGQEDIEALAELLSESAGT------------------------------------DTSIGKTGLCME--ICPLYSALAPEEQAKAFHP-PKGPAKSTRKVILATNIAETSVTINGIRHVVDTGWVKVRRYVPSTGLDSLKTTQIARAQAQQRTGRAGREAPGKCYRLFTESAFERLDAVPQPEIQRVNLTQVVLQLLAMGVDDPQHFDYLSPPSATALARAFETLLALGCIAEGGLSPGGNVDGTRILIPEKDDRQAVEAQADQKPSGPAKSRPVITPHGRRVASLPLDPVYAHFVLRASE--LGCLFEALTAVSMLSAENVLYMPSPHGGPDAAEQRNRATTAHRALAAYDGDVPTLVHIYERWVAAKKGNRWCWDHFVNARAMKKADEVREQLLLLVR-RLGLDPSQSCGNERQIFLRSLAAGLFLNVARRQPATSPALGKYCYKMLANGREAAIHPSSVLHARNPAPQCVVFTEVLTTSRPYIRGVSIVDPADLQELVPQFF 758
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: K3W6U4_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6U4_GLOUD) HSP 1 Score: 561 bits (1446), Expect = 1.620e-181 Identity = 330/743 (44.41%), Postives = 443/743 (59.62%), Query Frame = 2 Query: 1058 QEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXX-GYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDS--VSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIH-EEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAFLKE--RKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGRE-AQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFK 3265 Q R+ LPIF H+ II V+EHQ V++VGETGSGK+TQIPQ+++E +A TQPRRVAA+TVA+RV EV GY VRFDD T++ST++K+MTDG+L+REA+ P L YS IVLDEAHER+L TDILFG+V++ KR LKV+VMSATLDV LF+ FF +S + +PGR VDV YT + Q DYLD+ LVT LQIH +E + +G +LVFL GQ+DIE L LL E L AE + L VCP+FAA+P+EQQ++ F+PAP G RK +LATNIAETSITINGIRFVVD+G VK RSF +GME L ++ VSKAQA QR GRAGREAPGVCYRLF ED++ +L + P+I RV+L VVLQLK MGI+D FD++ P A+L+KA+ L LGA DK+G++T G++MA LP++P +A +L++STE C +E L+ V+ LS E++ F P ++A +A + F AYEGD TLL ++ +++ ++ WC +F+N R++ R VR QL L E+L + P ES ++ + +VAG F N A+R + G + ++T+ G E ++HPSSSL+ RNPP K VVF EL+ TS+ +I++V ++ WL EL P FFK Sbjct: 81 QRARQKLPIFVHRQKIISTVQEHQVVILVGETGSGKTTQIPQYIFE----------------------------------------------------------NNNDQRIAITQPRRVAAITVAQRVCQEVNKGPIGETVGYCVRFDDTTTKSTKLKFMTDGMLVREALLSPTLERYSVIVLDEAHERTLQTDILFGVVKQAMRKRKDLKVVVMSATLDVGLFQRFFAESNPAIIQIPGRQFNVDVFYTAKTQPDYLDSALVTVLQIHMDERESNGSILVFLTGQEDIETLETLLEEYGRTLPAEAMKLL-----------------------------------------VCPIFAAMPREQQMKVFDPAPAGVRKVILATNIAETSITINGIRFVVDTGLVKQRSFVAKSGMEMLLTEPVSKAQAWQRTGRAGREAPGVCYRLFPEDTFEQLSERAIPDIQRVSLEVVVLQLKTMGIDDILGFDFIEKPKTASLVKAMEKLYALGAFDKTGKLTQRGRQMAGLPVEPMYAVMLLKSTE--LGCAEEALSVVSMLSVESIFFSPRDKKA--QAAQSRAKFQAYEGDQITLLNIYNGYIQGNVKQRSKWCHDHFINHRAMMRVESVRAQLKGYL-EKLEL-PIESSFPDIDPLRKSIVAGFFLNTAMRSLADGNGGAKTAFKTMCGRSEIVKVHPSSSLFMRNPPPKWVVFNELVFTSKHYIRSVVIIEKEWLLELAPAFFK 718
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: D0MZQ2_PHYIT (DEAD/DEAH box RNA helicase, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0MZQ2_PHYIT) HSP 1 Score: 560 bits (1443), Expect = 1.180e-178 Identity = 328/742 (44.20%), Postives = 447/742 (60.24%), Query Frame = 2 Query: 1058 QEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXX-GYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRD--SVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEK-GDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAFLK--ERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGRE-AQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFF 3262 Q R+ LPI+AH++ II AV ++Q V++VGETGSGK+TQIPQ+++E+ RA VA TQPRRVAA+TVA+RV E GY VRFDD TS++TR+K+MTDG+L+REA+ P L YS +VLDEAHER+L TDILFG+V+R KR LKV+VMSATLDV LF+ FF+D + +PGR VDV YT + Q DYLD+ LV LQIH EEK +G +LVFL GQ+DIE L LL E L A+ + MVCP+FAA+P+EQQ++ FEPAP G RK +LATNIAETSITING+R+VVD+G VK RSF S+GME L+++ VSKAQA QR GRAGREAPG+CYRLF E+++ +L + P+I RV+L VVLQLK+MGI+D FD++ P + +L+KAL L LGALD G++T G++MA LP++P +A +L+++TE C +E L+ VA LS E++ + P ++A EA + F AYEGD TLL V +++ ++ WCR +++N R++ R VR QL L E+L + P ++ ++ + +VAG F N A+R + G + Y+T+ G E ++HPSSSL+ RNPP K VV+ EL+ TS+ +I++V ++ WL EL P FF Sbjct: 265 QRTRQRLPIYAHRSKIIEAVNDNQVVILVGETGSGKTTQIPQYIWES-------------------DRAHAR--------------------------------------VAITQPRRVAAITVAQRVCEEANRGPLGDSVGYCVRFDDTTSKNTRLKFMTDGMLVREALLSPTLERYSVVVLDEAHERTLQTDILFGIVKRAMRKRKDLKVVVMSATLDVALFKRFFQDFKPAVIQIPGRMFQVDVFYTAKTQPDYLDSALVAVLQIHLEEKTSNGSILVFLTGQEDIETLETLLEEYARSLPADALK-----------------------------------------LMVCPIFAAMPREQQMKVFEPAPAGVRKVILATNIAETSITINGVRYVVDTGLVKQRSFVASSGMEMLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEVVVLQLKIMGIDDALAFDFIEKPLKTSLVKALEKLYALGALDNKGKLTTLGRQMAGLPVEPMYAVMLLKATE--LGCAEEALSVVAMLSVESIFYSPRDKKA--EAAQSRARFVAYEGDQITLLNVFNGYIQCGSKQRNKWCRDHYINHRAMTRVESVRLQLKGYL-EKLEL-PIDTSFPDIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSLFMRNPPPKWVVYNELVFTSKHYIRSVLVIEKEWLVELAPTFF 902
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A448ZB75_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB75_9STRA) HSP 1 Score: 552 bits (1423), Expect = 8.430e-176 Identity = 351/827 (42.44%), Postives = 472/827 (57.07%), Query Frame = 2 Query: 1067 RRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXXGYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKR-----------------------------------------PKLKVIVMSATLDVDLFRGFFRDSVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIH---EEEKGDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKG-TRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPP---------KEEARREADDAHRAFAAYEGDLPTLLRVHEAFLKER-KDPT------------------WCRRNFVNGRSVARAIDVRQQLAKILRER-----LRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPST--------------SGGVG--RGCYRTVIGGREAQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFK 3265 R+ LP++A K I+R + EH ++V+ ETGSGKSTQIP +L E G+ + ++ TP + XXXXXXXXX + TQPRRVAA+TVA+RVA E GY VRFDD +SR T++ Y TDG+LLREAMSDPLLS Y IVLDE+HERSL TDILFG+V+R R P+LKV+VMSATL + F+ FF D+V++ +PGR PV +YT E Q+DY+D+ L T LQIH ++ G GD+LVFLPGQ++IE L+QLL+ +L E+ R+ +GA + ++ M+C ++AALP E Q+ AF P PKG +RK +LATNIAETS+T++GIR+VVD GK K R F +TGME L +D+S+AQA QR GRAGR + G+C+RL+ ED++ L +A PEI RVNLA V+L LK MG+ DP FD++T PS +L +A L LGAL S +TA G++MA LP+DP +AHLL++S P + C E+LT V+ LSAEN++F P K ++A AHR FA+YEGDLPTL + EA+ KE P+ WC RNF+NGR++ RA +VRQQL+ I + L +D +SCG + Q+L+C AGLF A R ++ SG +G RG Y+T IG IHP+S+++ RNP K VV+TELL T + +++ VT + WL E+ P FFK Sbjct: 101 RKELPVYAFKQEILRKMTEHDVLLVMAETGSGKSTQIPAYLEEGGLLSANRSEKKNARKE-TPGKRGKYKNKEGSSSLSRXXXXXXXXXTAPYHARS----------ICVTQPRRVAAMTVARRVAQERGCVLGTVVGYRVRFDDCSSRKTKLLYATDGMLLREAMSDPLLSRYGVIVLDESHERSLQTDILFGVVKRAMRARGHVDTSDENSDESNEEDAGSEETRDGKMKRLLRAKAEEWNLPRLKVVVMSATLQISTFQTFFPDAVTIQIPGRLFPVQTVYTKEYQEDYIDSALATSLQIHYGMDDGDGGGDILVFLPGQEEIETLNQLLKRHL-----EEDRD-----GGKVQKHLSDIVQDVGGIGTTISSQKGAAN-IVNGVMICVLYAALPPEAQMLAFAPKPKGCSRKIILATNIAETSVTLDGIRYVVDCGKHKTRDFSDATGMESLTVQDISRAQAAQRTGRAGRVSAGLCFRLYTEDAFDGLAEASVPEISRVNLASVLLVLKGMGVSDPLQFDFLTRPSTTSLRRACELLYALGALSDSMELTAHGRKMAKLPVDPIYAHLLLQS--PSYGCTSEMLTAVSMLSAENVMFRPGGGGPGEGNGKASLGQKAVQAHRRFASYEGDLPTLKNIFEAWRKEAIYTPSGVKKGRGNEYGGKILHGQWCARNFINGRALVRAFNVRQQLSSICAKSIDKGGLNMDVSQSCGEDEIQFLKCACAGLFLQSATRLTTSDETKGRRHDSNGGNSGRLGPSRGRYKTKIGSEVVSIHPTSTIFGRNPAPKSVVYTELLITKKTYLRGVTQIREEWLAEVAPDFFK 903
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A662Y4I3_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4I3_9STRA) HSP 1 Score: 549 bits (1414), Expect = 2.050e-174 Identity = 330/743 (44.41%), Postives = 442/743 (59.49%), Query Frame = 2 Query: 1058 QEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXX-GYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRD---SVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEKG-DGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAFLK--ERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGRE-AQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFF 3262 Q R+ LPI+AH++ II AV HQ V++VGETGSGK+TQIPQ+++E RA VA TQPRRVAA+TVA+RV E GY VRFDD TS +TR+K+MTDG+L+REA+ P L YS IVLDEAHER+L TDILFG+V+R +R LKV+ MSATLDV LFR FF D SV + +PGR VDV YT + Q DYLD+ LV LQIH +EK +G +LVFL GQ+DIE L LL E L A+ + L VCP+FAA+P+EQQ++ FEPAP G RK +LATNIAETSITING+RFVVD+G VK RSF +GME L+++ VSKAQA QR GRAGREAPGVCYRLF E+++ +L + P+I RV+L VVLQLK MGIED F+++ P + +L+KAL L LGALD +G++T G++MA LP++P +A +L+++TE C +E L+ V+ LS E++ + P ++A EA + F AYEGD TLL + +++ ++ WCR +++N R++ R VR QL L E+L + P S ++ + +VAG F N A+R + G + Y+T+ G E ++HPSSSL+ RNPP K VV+ EL+ TS+ +I++V ++ WL EL P FF Sbjct: 263 QRTRQKLPIYAHRSKIIDAVASHQVVILVGETGSGKTTQIPQYIWEN-------------------DRAHAR--------------------------------------VAITQPRRVAAITVAQRVCEEANRGSLGDSVGYCVRFDDTTSPNTRLKFMTDGMLVREALLSPTLKRYSVIVLDEAHERTLQTDILFGVVKRAMRQRKDLKVVFMSATLDVALFRSFFSDFKPSV-IQIPGRQFQVDVFYTAKTQPDYLDSALVAVLQIHLDEKSSNGSILVFLTGQEDIETLETLLDEYARSLPADALKLL-----------------------------------------VCPIFAAMPREQQMKVFEPAPSGVRKVILATNIAETSITINGVRFVVDTGLVKQRSFVAKSGMEMLQTESVSKAQAWQRTGRAGREAPGVCYRLFPEETFEQLSERAIPDIQRVSLEVVVLQLKCMGIEDVLGFEFIEKPLKTSLVKALEKLYALGALDNTGKLTTRGRQMAGLPVEPMYAVMLLKATE--LGCAEEALSVVSMLSVESIFYSPRNKKA--EAAQSRARFIAYEGDQITLLNIFNGYVQCGAKQRNKWCRDHYINHRAMTRVESVRLQLKGYL-EKLEL-PIASSFPDIDPLRKSIVAGFFLNTAMRSLADGLGGSKTAYKTMCGRSEIVKVHPSSSLFMRNPPPKWVVYNELVFTSKHYIRSVLVIEKDWLVELAPTFF 900
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A484DRA6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRA6_BRELC) HSP 1 Score: 541 bits (1393), Expect = 4.810e-174 Identity = 319/750 (42.53%), Postives = 439/750 (58.53%), Query Frame = 2 Query: 1058 QEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXX-GYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRD--SVSLHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEK-GDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAF----LKERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGRE-AQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFKPSGAV 3280 Q R+ LPI+ H++ II + +Q ++VGETGSGK+TQIPQ+++E T + +A TQPRRVAA+TVA+RV E+ GY VRFDD T++ T++K+MTDG+L+REA+ P L YS +VLDEAHER+L TDILFG+V+R R LKV+VMSATLDV LF+ FF D + +PGR + VDV YT + Q DYLDA LV LQIH EEK G +LVFL GQ+DIE L LL + L A+ + + MVC +FAA+P+EQQ++ FEPAP G RK +LATNIAETSITING+RFVVD+G VK RSF S+GME L+++ VS+AQA QR GRAGREAPG+CYRLF ED++ +L + P+I RV+L VVLQLK MGI+D F+++ P + +L+KAL L LGALD G++T G+ MA LP++P +A +L+++TE C +E L+ VA LS E++ + P +A EA + F +EGD TLL V+ + +K+R WCR +F+N R++ R VR QL L E+L++ S ++ + +VAG F N A+R + G + Y+T+ G E ++HPSSSL+ RNPP K VV+ EL+ TS+ +I++V ++ +WL E+ P FF +V Sbjct: 57 QRSRQRLPIYTHRSKIIETIHRNQVAILVGETGSGKTTQIPQYVWENDRT---------------------------------------------------------SVRIAITQPRRVAAITVAQRVCEEINRGPLGDIVGYCVRFDDTTTKKTQLKFMTDGMLVREALLSPTLERYSVVVLDEAHERTLQTDILFGIVKRAMRTRKDLKVVVMSATLDVTLFQTFFEDFRPAIMQIPGRMYQVDVFYTAKTQSDYLDAALVAVLQIHLEEKMNGGSILVFLTGQEDIETLETLLEDYARSLPAD-----------------------------------------VLKLMVCSIFAAMPREQQMKVFEPAPDGVRKVILATNIAETSITINGVRFVVDTGLVKQRSFVASSGMEMLQTESVSRAQAWQRTGRAGREAPGICYRLFPEDTFEQLPERAVPDIQRVSLEIVVLQLKCMGIDDVLGFEFIEKPLKTSLIKALEKLFALGALDNKGKLTTLGRHMAGLPVEPMYAVMLLKATE--LGCAEEALSVVAMLSVESIFYSPRDRKA--EAAQSRAQFVGFEGDQITLLNVYNGYTLCSVKQRNK--WCRDHFINHRAMTRVESVRLQLKGSL-EKLKLSIGSSYP-DIDPLRKSIVAGFFLNTAMRSVAEGLGGSKTAYKTMCGRSEIVKVHPSSSLFMRNPPPKWVVYNELVFTSKHYIRSVLVIEKAWLIEMAPTFFAKKSSV 700
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Match: A0A8K1CCL3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCL3_PYTOL) HSP 1 Score: 538 bits (1385), Expect = 3.980e-173 Identity = 322/749 (42.99%), Postives = 445/749 (59.41%), Query Frame = 2 Query: 1058 QEQRRGLPIFAHKAGIIRAVKEHQTVVVVGETGSGKSTQIPQFLYEAGITGGGAGWGASGKQGGTPSRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLLVACTQPRRVAAVTVAKRVASEVXXXXXXXX-GYTVRFDDRTSRSTRIKYMTDGVLLREAMSDPLLSAYSAIVLDEAHERSLDTDILFGLVRRLQPKRPKLKVIVMSATLDVDLFRGFFRDSVS--LHVPGRTHPVDVMYTTEDQDDYLDACLVTCLQIHEEEK-GDGDVLVFLPGQDDIEALSQLLRENLAKLRAEKSRELAAXXXXXXXXXXXXXXXXXXXXXXXXDDLQGAGDGLLRESMVCPVFAALPQEQQLEAFEPAPKGTRKFVLATNIAETSITINGIRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPSTFDYVTAPSRAALLKALGSLAMLGALDKSGRVTADGKRMAALPLDPAFAHLLIRSTEPRFSCVKEILTTVACLSAENLLFCPPKEEARREADDAHRAFAAYEGDLPTLLRVHEAFLK--ERKDPTWCRRNFVNGRSVARAIDVRQQLAKILRERLRIDPEESCGAEMSQYLRCLVAGLFTNVALRQPSTSGGVGRGCYRTVIGGRE-AQIHPSSSLWRRNPPAKCVVFTELLSTSRDFIKTVTAVDASWLRELVPQFFKPSGAVG 3283 Q ++ LPIFAH++ I+ ++ H+ +++VGETGSGK+TQIPQ+++E + K+ +A TQPRRVAA+TVA+RV EV GY+VRFDD +S++T++++MTDG+L+REA+ P L YS IVLDEAHER+L TDILFG+V++ KR LKV+VMSATLDV LF+ FF +S L +PGR VDV YT + Q DYLDA L+T LQIH +EK +G +LVFL GQ+DIE L LL E L A D L E VCP+FAA+P+EQQ++ FEPA KG RK +LATNIAETSITINGIR+VVD+G VK RSF +GME L ++ VSKAQA QR GRAGREAPGVCYRLF E+++ +L + P+I RV+L VVLQLK MGI+D FD++ P +L+KA+ L LGA D SG++T G++MA LP++P +A +L++S+E C +E L+ V+ LS E++ + P + + A + F AYEGD TLL + A+++ ++ WCR +F+N R++ R VR QL L E+L + P S ++ + ++AG F N A+R + G + Y+T+ G E ++HPSS L+ RNPP K VV+ EL+ TS+ +I++V ++ WL E+ P FFK VG Sbjct: 37 QRTKQRLPIFAHRSRILSTLQSHRVIILVGETGSGKTTQIPQYIFEN-----------NNKE-----------------------------------------------CIAITQPRRVAAITVAQRVCEEVNRNGLGQTVGYSVRFDDMSSKATKLRFMTDGMLVREALLSPSLDRYSVIVLDEAHERTLQTDILFGVVKQALRKRKDLKVVVMSATLDVGLFQKFFAESNPGVLQIPGRQFHVDVFYTPKTQPDYLDAALITVLQIHLDEKDSNGSILVFLTGQEDIETLDTLLEEYARSLPA---------------------------------------DTLKLE--VCPIFAAMPREQQMKVFEPAMKGVRKVILATNIAETSITINGIRYVVDTGLVKQRSFVAKSGMEMLLTEPVSKAQAWQRTGRAGREAPGVCYRLFPEETFEQLAERAIPDIQRVSLEVVVLQLKTMGIDDVLGFDFIEKPKVTSLVKAMEKLYALGAFDSSGQLTERGRQMAGLPVEPMYAVMLLKSSE--LGCAEEALSVVSMLSVESIFYSP--RDKKELAAQSRAKFMAYEGDQITLLNIFNAYIQCNVKQRNKWCRDHFINQRAMIRVESVRTQLKGYL-EKLGL-PIGSTFPDIDPLRKSIIAGFFLNTAMRSLADGAGGSKTAYKTMNGQSEIVKVHPSSCLFMRNPPPKWVVYNELVFTSKYYIRSVLIIEKEWLVEIAPTFFKKLSPVG 680 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.499.1 >prot_C-linearis_contig10.499.1 ID=prot_C-linearis_contig10.499.1|Name=mRNA_C-linearis_contig10.499.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1082bp MWPPTAGGTRDVGPGGNVASEGKKNKRRKKKKRSSTSDPSSPAPSSEEQRback to top mRNA from alignment at C-linearis_contig10:1485493..1497696+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.499.1 ID=mRNA_C-linearis_contig10.499.1|Name=mRNA_C-linearis_contig10.499.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=12204bp|location=Sequence derived from alignment at C-linearis_contig10:1485493..1497696+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1485493..1497696+ >mRNA_C-linearis_contig10.499.1 ID=mRNA_C-linearis_contig10.499.1|Name=mRNA_C-linearis_contig10.499.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6492bp|location=Sequence derived from alignment at C-linearis_contig10:1485493..1497696+ (Chordaria linearis ClinC8C monoicous)back to top |