mRNA_C-linearis_contig10.488.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A6H5LLK6_9PHAE (Peptidase A1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLK6_9PHAE) HSP 1 Score: 789 bits (2037), Expect = 8.610e-281 Identity = 403/526 (76.62%), Postives = 437/526 (83.08%), Query Frame = 2 Query: 482 VTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDG---PTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAYHRRKSRRDYQIIAGGAPTTMAPHHGAGSRAAPVIEVGTSQAQPGVAMGLYVQTQGA-QGASADGVLGRGWRAYGSTDEAPAGAGCLPPSSR 2047 +TLVDYYNNQYVG+IGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGL+T +G EPKMFEVDYGSGSVLGMEG+D+V+LAGL LSQVLFGLVLYEDQQIRTFMMDGIAGLGF GLSMVTTPTLLELLHR HPEVPN+FSVYLSCDPSDTE PSHMLFGSYDLSIVS+ AAWHYTPVIRH+RGQLRYWTVKMTAM M TS+P+ D E EA E+P +G P GG+ NLC++GCYAIVDTGTSGIAVPEDYFYTL++QITEASGA+CKGTTCY TKGSDFPDL+FELYPSN+FILRGEDYTVC+R G+CVVKLQPSFGG+FWILGDVFIEAYYTLFD ENLRVGFACTG GCSGGTWHG GGFMEIE+Q SWRSYA T+SIVVC LSAGYI F YASPAY RR+SRR+Y IIAGGA T AAP G + PG G +G+ QG D VLG+GW+AYGSTDEA AGAGCLPPSSR Sbjct: 2 LTLVDYYNNQYVGIIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLLTEDGGNSAEAG-------VEPKMFEVDYGSGSVLGMEGVDDVNLAGLDLSQVLFGLVLYEDQQIRTFMMDGIAGLGFGGLSMVTTPTLLELLHRDHPEVPNVFSVYLSCDPSDTEKPSHMLFGSYDLSIVSEGAAWHYTPVIRHSRGQLRYWTVKMTAMAMVTSSPLADT----AEEEAT-AEQPAEGYEIPHLGGSAEINLCSSGCYAIVDTGTSGIAVPEDYFYTLAEQITEASGASCKGTTCYGTKGSDFPDLMFELYPSNRFILRGEDYTVCNRRGLCVVKLQPSFGGDFWILGDVFIEAYYTLFDAENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWRSYASTLSIVVCLLSAGYIIFTYASPAYKRRRSRREYDIIAGGAAATGTATTPVPGGAAPA---GXXRGSPG---GDGAGPEGSLQGV--DDVLGKGWKAYGSTDEASAGAGCLPPSSR 507
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: D7FZZ3_ECTSI (Pepsinogen n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ3_ECTSI) HSP 1 Score: 747 bits (1928), Expect = 2.140e-262 Identity = 375/483 (77.64%), Postives = 410/483 (84.89%), Query Frame = 2 Query: 272 FVPLSKRARAGGAVYGVDVREDGISRRKLKLDEVVRVSEGPGGVATSDGEDSGATAGG-----DIGGGEGYDGNTVTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDG---PTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWR 1696 FVPL++RARAGGAVYGVDVR++GISRR+L+LD G GG E+ G ++GG D G EGY+GN +TLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGL+T +G EPKMFEVDYGSGSVLGMEG+D+VSLAGL LSQVLFGLVLYEDQQIRTFMMDGIAGLGF GLSMVTTPTLLELLHR HPEVPN+FSVYLSCDPSDTE P+HMLFGSYDLSI+S+ A WHYTP+I H+RGQL+YWTVKMTAM M TS+P+ D E EA E+P +G P GG+E NLC++GCYAIVDTGTSGIAVPEDYFYTL++QITEASGA+CKGTTCY+TKGSDFPDL+FELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGG FWILGDVFIEAYYTLFDVENLRVGFACTG GCSGGTWHG GGFMEIE+Q SWR Sbjct: 31 FVPLTRRARAGGAVYGVDVRDEGISRRRLELD-------GAGGATA---ENEGVSSGGGEGLSDAEGEEGYEGNMLTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLLTEDGGNSAEAG-------VEPKMFEVDYGSGSVLGMEGVDDVSLAGLDLSQVLFGLVLYEDQQIRTFMMDGIAGLGFVGLSMVTTPTLLELLHRDHPEVPNVFSVYLSCDPSDTEKPNHMLFGSYDLSILSEGAPWHYTPLIPHSRGQLKYWTVKMTAMAMVTSSPLADT----AEEEASAGEQPAEGYEIPYLGGSEEGNLCSSGCYAIVDTGTSGIAVPEDYFYTLAEQITEASGASCKGTTCYSTKGSDFPDLMFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGNFWILGDVFIEAYYTLFDVENLRVGFACTGNGCSGGTWHGQGGFMEIEDQASWR 492
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A835ZFV3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV3_9STRA) HSP 1 Score: 468 bits (1203), Expect = 9.000e-155 Identity = 248/498 (49.80%), Postives = 310/498 (62.25%), Query Frame = 2 Query: 482 VTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAYHRRKSRRDYQIIAGGAPTTMAPHHGAGSRAAPVIEVGTSQAQPGVAMGLYVQTQGAQGASADGVLG 1975 ++L +Y+NNQYVG I +G P Q L+VVLDTGSSDLWIPG GCT CGNHATFDG++S T+ + + + P++FE+DYGSG+V G + ++ VSL GL L V FG VLYEDQQIR FMMDGIAGLGFSGLS++T PTLL+LL + H ++P LFSVYLS DP D PSH+ FG +DL IVS A WHYTPV+R A G+LRYWTVK+T +G+ + G+ G V + C GC AIVDTGTSGIAVPE + L Q+T+ G C+GT C K SDFPDL+F +YP N F LR EDY VC+ WG C+VKLQPSFGG +WILGD F++AYY +FDV+NLRVGFAC G C GGTWHG GG +E+EE WR + + V+ +SA Y+ + +P RR+ ++ P A HG A +EV Q Q LY G+ G LG Sbjct: 47 LSLANYFNNQYVGTISVGLPAQDLTVVLDTGSSDLWIPGWGCTLCGNHATFDGTRSLTYRPLMSGDS---------------PRLFEIDYGSGAVRGTQAMERVSLGGLVLEDVAFGEVLYEDQQIRNFMMDGIAGLGFSGLSIITRPTLLDLLRKQHADLPALFSVYLSTDPHDASRPSHLAFGGFDLDIVSANATWHYTPVVRQAYGELRYWTVKVTGVGVVGTR-------GKDRGRRVMSQ----------------CPGGCLAIVDTGTSGIAVPEVIYGDLVAQVTK--GLNCRGTQCIGAKASDFPDLVFSIYPDNVFPLRNEDYVVCTGWGQCLVKLQPSFGGSYWILGDTFLQAYYAVFDVDNLRVGFACEGT-CQGGTWHGKGGLLELEEAEQWRVWVLAAASVLGLVSAAYLAGSLIAPFTRRRRPQQ---------PPPQAQQHG--YAAIQDVEVSGEQGQSVAVEALYGGAAGSPVGGTYGALG 492
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S4DAX8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAX8_HETAK) HSP 1 Score: 452 bits (1162), Expect = 2.500e-148 Identity = 225/436 (51.61%), Postives = 285/436 (65.37%), Query Frame = 2 Query: 482 VTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAYHRRK 1789 + L DY+NNQYVG IG+G P Q LSVV DTGSSDLWIPG GC+ CG+HATFD ++S T+ ++ EP+ FEVDYGSG V G +DN+ + GL V FG V YED+ IR F+MDGIAGLGF GL+MVT PT+LEL+ + +P VP +FSVYLS +P D + PSH+ FG YDLSIVS+ A WHYTPVIR + G +YWTVKM + + ++ G++ D +C++GCYAIVDTGTSGIA+PE Y+Y + + ITE G C+G TCYN + SDFPDL F L P N+ LR DY CSRWG CV K+QPS+GG +WILGDVF+EAYYTLFDVEN+RVGFAC G C+GG WHG GGF+E+EE W + +V+ + Y+ ++A Y + K Sbjct: 100 LLLTDYFNNQYVGQIGLGEPAQTLSVVFDTGSSDLWIPGRGCSQCGDHATFDKTRSLTYSMIVDS--------------SEEPRPFEVDYGSGKVTGYRAMDNLDVGGLKCEGVYFGEVTYEDELIRKFIMDGIAGLGFRGLAMVTKPTILELVFQQNPTVPEVFSVYLSNNPRDHDKPSHLWFGGYDLSIVSENATWHYTPVIRRSYGDFKYWTVKMYGLQVLSNG---------------GLDVKAD-----------MCSSGCYAIVDTGTSGIAIPELYYYEVVNYITE--GLHCRGITCYNVQVSDFPDLTFYLAPDNELPLRAADYVTCSRWGECVFKIQPSYGGAYWILGDVFMEAYYTLFDVENMRVGFACDGT-CTGGDWHGKGGFLELEEAQEWLKFTFLGLLVLSLSTIVYLVSSFAPSIYMKNK 492
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: F0Y569_AURAN (Peptidase A1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y569_AURAN) HSP 1 Score: 436 bits (1122), Expect = 9.260e-143 Identity = 218/430 (50.70%), Postives = 271/430 (63.02%), Query Frame = 2 Query: 476 NTVTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYA 1765 N + L DY+NNQYVG I IG+P Q LSVV DTGSSDLWIPG GC CG+HATFD + SST+ + + + FEVDYGSG V G + D+V L L L V FG V+YED+ I++FMMDGIAGL F GLSMVT PTLLELLH HP+VP LFS+YLS DP D + PSH+ FG YDL IV D A WHYTPVI+ G +YWTVKMT M + ++ ++ +LC +GCYAIVD+GTSGIAVPE+ + L +T+ G C+ TCY K +DFP L F+L P N+F + DY CSRWG CV+K Q S G +WILGDVF+EAYYTL+DV+NLRVGFAC G C+GGTWHG GG++E++E ++W + + Y+ F YA Sbjct: 75 NDLVLTDYFNNQYVGQISIGTPAQQLSVVFDTGSSDLWIPGRGCNECGHHATFDYTASSTYEPLLDK--------------NGDLSKFEVDYGSGKVTGYQAKDSVHLGSLELDDVAFGEVVYEDRDIQSFMMDGIAGLAFRGLSMVTKPTLLELLHEQHPDVPYLFSLYLSNDPDDADRPSHLTFGDYDLGIVGDNATWHYTPVIKRGFGDFKYWTVKMTGMAVVSTDDASEL---------------------------DLCPSGCYAIVDSGTSGIAVPEESYDALVAAVTK--GLNCRDITCYYAKSADFPALTFKLSPDNEFPMHAADYVSCSRWGECVIKFQKSSGSSYWILGDVFMEAYYTLYDVDNLRVGFACAGD-CNGGTWHGKGGYVEVDEVSTWAQLLLCFAALSVVSILAYVAFLYA 460
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S3JN10_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JN10_9STRA) HSP 1 Score: 400 bits (1027), Expect = 3.280e-128 Identity = 201/404 (49.75%), Postives = 254/404 (62.87%), Query Frame = 2 Query: 482 VTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSW 1693 + L DY+NNQYVG + IG+P Q L+VV DTGSSD+WIPG GCT CG+H+TFD + SST+ V + + E FEVDYGSG V G + D V L L L V FG V +ED I++FMMDGIAGL F GL+MVT PTLLE L +P + +FS+YLS DPS T SH++FG+YDL IV A WHYTPV++ G +YWTVKM + D+LC+ CYAIVD+GTSGIAVPED + L +T CK TCY K SDFPDL+F+L P N+F L+ DY CS+WG CV+K Q S G +WILGDVFIEAYYTL+DV+NLRVGFAC G+ C+GG+WHG GG++++++ ++W Sbjct: 34 IALTDYFNNQYVGELSIGTPRQKLNVVFDTGSSDIWIPGRGCTECGDHSTFDSTASSTYEAVLNK--------------DGEFASFEVDYGSGKVSGYQAKDTVGLGSLSLDGVTFGEVNFEDHDIQSFMMDGIAGLAFRGLAMVTKPTLLETLMEQYPSMAAVFSLYLSNDPSKT---SHLVFGTYDLDIVGPNATWHYTPVVKRGLGDFKYWTVKMFGLSRLNQND------------------------------DDLCSDSCYAIVDSGTSGIAVPEDVYDDLVKLVTREL-TNCKDITCYYAKQSDFPDLVFKLAPDNEFPLKATDYVACSKWGECVIKFQKSSGSTYWILGDVFIEAYYTLYDVDNLRVGFACQGQ-CNGGSWHGRGGYVDVDDVSTW 388
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S4A4W9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4W9_9STRA) HSP 1 Score: 399 bits (1026), Expect = 1.190e-127 Identity = 214/446 (47.98%), Postives = 268/446 (60.09%), Query Frame = 2 Query: 476 NTVTLVDYYNNQYVGMIGIGSPPQYLSVVLDTGSSDLWIPGMGCTA-CGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQ--LRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAYHRRKSRRDY 1804 +T++L DY+NNQYVG + IG+PPQ L+VV DTGSSDLW+P C A CG H TFDGSKSST+ V P FEVDYGSG V G + D V++ GL + +V FG V YED++IR FMMDGIAG+ F GL+MVT PTLLELLH HPEVP LFSVYLS +P D +S H+ FGSYDLS+V A+WHYTP++R LRYW K+ + V +E GD CA GCY+IVD+GTSG+ +P+D + +T G CK TCY DFPDL F L P N F LR DY CSRWG CVVK+Q + G +WILGDVF EAYYTL+DVENLRVGFAC G+ C GG WHG GG++++++ + W + + + + YA RR+++R Y Sbjct: 120 HTISLTDYFNNQYVGSLEIGTPPQKLTVVFDTGSSDLWLPAKKCGAKCGKHDTFDGSKSSTYEQVMNP--------------HGTPAAFEVDYGSGRVTGAQARDTVTVGGLKIEKVKFGEVDYEDEEIREFMMDGIAGMAFPGLAMVTQPTLLELLHEQHPEVPYLFSVYLSTNPDDKKS--HLAFGSYDLSLVGKNASWHYTPLVRRGDEDTTLRYWLTKL---------------------KGVELEV-----------GDAWCAKGCYSIVDSGTSGLGLPDDVYDDFVAAVTR--GLNCKDVTCYYASEDDFPDLSFSLEPDNVFPLRARDYVSCSRWGECVVKVQKASGSPYWILGDVFTEAYYTLYDVENLRVGFACEGE-CEGGGWHGKGGYVDVDDPSVWAQLLVAFAALSVVGILAHSCYRYAKI---RRRTKRFY 511
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S2SMR0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SMR0_9STRA) HSP 1 Score: 370 bits (951), Expect = 3.710e-117 Identity = 199/421 (47.27%), Postives = 250/421 (59.38%), Query Frame = 2 Query: 551 LSVVLDTGSSDLWIPGMGCTACGNHATFDGSKSSTFGLVTTEGTXXXXXXXXXXXXEAEPKMFEVDYGSGSVLGMEGIDNVSLAGLGLSQVLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPT--ISIVV--CFLS-AGYIFFAYASPAYHRRKSRR 1798 L+VV DTGSSDLW+P CTACG+H TF SST+ + G+ FEVDYGSG VLG E D V + L LS V FG V YED +I++FMMDGIAG+ FSGLSMVT PT+++LL HPE+ +FS+YLS P D + PSH+L G YDLSIV A WHYTPV++ + G +YWTVK+T++ A ST + D+ + C+AIVD+GTSGIA+P + T+ +T+ G C TCY SDFPDL F L P N+F + DY CS+WG CVVK Q + G +WILGD FIEAYYTLFD EN+RVGFAC+G+ CSGG+WHG GGF+E++ W +SI+V CF GYIF A+ A RR Sbjct: 2 LTVVFDTGSSDLWLPSSACTACGDHETFQAEASSTYEEIYHHGSRIT---------------FEVDYGSGDVLGYEAEDVVQIGDLELSGVKFGEVTYEDTEIQSFMMDGIAGMAFSGLSMVTNPTIVDLLSSQHPELSTMFSMYLSNKPQDAKHPSHLLIGGYDLSIVGSNATWHYTPVVKRSYGDFKYWTVKITSV-KAGSTELCDS-------------------------------SMCFAIVDSGTSGIAIPSSQYATVLATVTK--GLQCSDITCYYASASDFPDLYFSLAPDNEFPILASDYVTCSKWGECVVKFQQATGASYWILGDTFIEAYYTLFDAENMRVGFACSGQ-CSGGSWHGKGGFIEVDSPPLWEQVIVILGVSIIVAFCFYGLGGYIFDLGAACARRLNLKRR 372
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S2UUR2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR2_9STRA) HSP 1 Score: 344 bits (882), Expect = 1.650e-109 Identity = 167/319 (52.35%), Postives = 212/319 (66.46%), Query Frame = 2 Query: 821 VLFGLVLYEDQQIRTFMMDGIAGLGFSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAY 1777 + FG V YED+ IR F+MDGIAGLGF GLSMVT PT+LELL + +P+VP +FSVYLS +P D + PSH+ FG YDL+IVS A WHYTPVIR + G +YWTVKM + E +GP + +C+ GCYAIVDTGTSGIA+PE Y+Y + + IT+ G C+G TCYN + +DFPDL F L P N+ LR EDY CSRWG CV K+QPS+GG +WI+GDVF+EAYYTLFD+EN+RVGFAC GK CSGG WHG GGF+E+E+ W + +V+ + Y+ ++A Y Sbjct: 3 IYFGEVTYEDELIRKFIMDGIAGLGFRGLSMVTKPTILELLFQQNPQVPKVFSVYLSNNPRDHDKPSHLWFGGYDLNIVSANATWHYTPVIRRSYGDFKYWTVKMLGL------------------------EILNGPAMPSSIRAQMCSTGCYAIVDTGTSGIAIPEIYYYDVVNYITQ--GLHCRGITCYNAQVTDFPDLTFTLSPDNELPLRAEDYVTCSRWGECVFKIQPSYGGAYWIMGDVFMEAYYTLFDIENMRVGFACAGK-CSGGDWHGKGGFLEVEDSQEWLKFMFLGLLVLSMSTIVYLVSSFAPSLY 294
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Match: A0A7S2CG53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG53_9STRA) HSP 1 Score: 290 bits (742), Expect = 3.590e-89 Identity = 148/306 (48.37%), Postives = 186/306 (60.78%), Query Frame = 2 Query: 896 FSGLSMVTTPTLLELLHRGHPEVPNLFSVYLSCDPSDTESPSHMLFGSYDLSIVSDTAAWHYTPVIRHARGQLRYWTVKMTAMGMATSTPVTDAPGGEGEGEAVGMEEPRDGPTFGGAEGDNLCAAGCYAIVDTGTSGIAVPEDYFYTLSDQITEASGATCKGTTCYNTKGSDFPDLLFELYPSNKFILRGEDYTVCSRWGVCVVKLQPSFGGEFWILGDVFIEAYYTLFDVENLRVGFACTGKGCSGGTWHGTGGFMEIEEQTSWRSYAPTISIVVCFLSAGYIFFAYASPAYHRRKSRRDYQII 1813 F GLSMVT PT+L+LL+ HP+VP +FS++LS DP D + PSH++FGSYDL IV A WHYTPVI+ G +YWTVKM++M + E R + +LC + CYAIVD+GTSGIAVPED + L +T+ G CKG TCY SDFPDL+F L P N+F L EDY CS WG CV+K Q S G +WILGDVFIEAYYTLFDVEN+R+GFAC G+ C GG WHG GGF+E++ W + V + Y F + + Y R + RR +I Sbjct: 2 FRGLSMVTKPTILDLLNEQHPDVPFMFSMFLSNDPDDEKHPSHLVFGSYDLEIVGPNATWHYTPVIKRGYGDFKYWTVKMSSMTV----------------------ESRRNDQW------DLCKSTCYAIVDSGTSGIAVPEDSYDDLISYVTD--GLHCKGITCYYASESDFPDLVFFLSPDNEFPLLAEDYVSCSHWGECVIKFQVSSGSSYWILGDVFIEAYYTLFDVENMRIGFACDGE-CGGGNWHGQGGFIEVDGPPYWEQLVLLTASVCVVCATFYGMFTFFTGLYVRHQQRRSAGMI 276 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.488.1 >prot_C-linearis_contig10.488.1 ID=prot_C-linearis_contig10.488.1|Name=mRNA_C-linearis_contig10.488.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=677bp MGGKDRVLHALPSMAAARCPHAFIALALLPLLAQLGQAEHEPLGARLKGVback to top mRNA from alignment at C-linearis_contig10:1241340..1248864+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.488.1 ID=mRNA_C-linearis_contig10.488.1|Name=mRNA_C-linearis_contig10.488.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=7525bp|location=Sequence derived from alignment at C-linearis_contig10:1241340..1248864+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:1241340..1248864+ >mRNA_C-linearis_contig10.488.1 ID=mRNA_C-linearis_contig10.488.1|Name=mRNA_C-linearis_contig10.488.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=4062bp|location=Sequence derived from alignment at C-linearis_contig10:1241340..1248864+ (Chordaria linearis ClinC8C monoicous)back to top |