mRNA_C-linearis_contig10.465.1 (mRNA) Chordaria linearis ClinC8C monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: D7G017_ECTSI (Tub domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G017_ECTSI) HSP 1 Score: 937 bits (2422), Expect = 0.000e+0 Identity = 486/544 (89.34%), Postives = 504/544 (92.65%), Query Frame = 1 Query: 220 MDLLDLGFDSVEIDAPSDGADGNQAG----EEGGGGGQGQPAGMSTISFNAADEQRQQDQGEG-ASHGGSFLDNLTDPRASAREYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNE-GDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFES-DDPEEQRANQHYATLGSEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 +DLLDLGFDSVEID PSDGA +QAG E GGG GQGQPA +STISFNAADE RQQ+Q SHGGSFLDNLTDPRASAREY+VVFGLSG G RPDLGL MQ DYYGNQAIVKGFSLVDGRVGPAQA GLICVGDVLV VG DRVKGLSFPS LGVVR+ACRERGQIRLTF GTGEENKPR EDSEM+EARWFIHQQKARYYRPPPPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDA+LQGPMLFHTLQDTHLREL+DIPTSSDSAVYLGCM PNLLGTEFRQLDHRVDPRDSA MEY+K+KG+NELSAVVYEPNVMGRVPNAMKVLLRRP+A+QSSGSDGLTADN+ G XXX XXXXXXXXX QWGVS+E+GVWDEPIIKRWED KNRHKPAFRPSSPLKTFRNIFKNFES DDPEEQRA QHYATLGSEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLV+PEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT Sbjct: 11 VDLLDLGFDSVEIDGPSDGATDSQAGGSTNEGGGGAGQGQPASLSTISFNAADEARQQEQRSSETSHGGSFLDNLTDPRASAREYDVVFGLSGGASG-RPDLGLTMQADYYGNQAIVKGFSLVDGRVGPAQASGLICVGDVLVAVGGDRVKGLSFPSILGVVRDACRERGQIRLTFTAGTGEENKPRAEDSEMLEARWFIHQQKARYYRPPPPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDANLQGPMLFHTLQDTHLRELKDIPTSSDSAVYLGCMFPNLLGTEFRQLDHRVDPRDSAAMEYVKEKGRNELSAVVYEPNVMGRVPNAMKVLLRRPIASQSSGSDGLTADNDDGGGXXXGEXXXXXXXXXGQWGVSMERGVWDEPIIKRWEDGKNRHKPAFRPSSPLKTFRNIFKNFESSDDPEEQRAQQHYATLGSEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVSPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 553
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A836CGA0_9STRA (Tubby C-terminal-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA0_9STRA) HSP 1 Score: 343 bits (881), Expect = 1.050e-104 Identity = 230/496 (46.37%), Postives = 287/496 (57.86%), Query Frame = 1 Query: 454 EYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFS-LVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKRWEDAKNRHKPAFRPSSP-LKTF-----------RNIFKN-----FESDDP-------------EEQRANQHYATLGSE------GSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 +YEV F + +GL+++ DYYG +AIV+GF+ L GR PA+ACG I GD L V + V + F TL +++ A R +RL G G + + EAR I + KAR++ P + MVYC L RHRG HVT+F L+RDDTGEFLLACS++A GPM+FHT QD+HLR L+DI T+ DSA YLGCM+PN LGTEFR +D R P + GK E+ AVVY+ NV+GRVPN ++LLRRP G XXXXXXXXXXXXXXX G V+ G+ E + W R +R SS L T +F + ++DD A +H+ + S SDI+ ET PSWN L AW LNFNGRV+IPSKKNFL APE+GNL ME +FG+G V +RHGKMSK+RFSVDFRHP+ PIVAL VCCSTFA K VVT Sbjct: 3 DYEVTF--------DHGPIGLSVEADYYGTRAIVRGFAALAGGREAPARACGRIRPGDYLTHVDGECVVDVPFERTLELLKNAQAGRFSLRLRGR-GVGAWGARGGVNDGVEEARRAIFEAKARFFTAPRADDGMVYCGLTRHRGRHVTAFALHRDDTGEFLLACSMEADGTGPMIFHTQQDSHLRMLKDITTAQDSASYLGCMVPNFLGTEFRLMDFRESPERA---------GKYEVCAVVYDVNVLGRVPNFFRLLLRRPRT-------GXXXXXXXXXXXXXXXXXXXXXXXXGRGGGVDAGLALEQRARGWGQRPQRRLYQWRCSSRCLNTVILRRLATRLMHAQVFSDGSGGRCDTDDAFSIHRCSPARSLCHGAHALRHHDSSSSPIHQCSPASDIMVLETKRPSWNPALEAWVLNFNGRVRIPSKKNFLGAPERGNLAMETEFGDGAVLLRHGKMSKARFSVDFRHPLPPIVALAVCCSTFAQKRVVT 473
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A6V1UG96_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UG96_HETAK) HSP 1 Score: 323 bits (828), Expect = 1.150e-97 Identity = 194/470 (41.28%), Postives = 268/470 (57.02%), Query Frame = 1 Query: 448 AREYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGE-ENKPRVEDSEMVEARWFIHQQKARYYRPPPPSED-----MVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPR-DSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPV-ATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFESDDPEEQRANQHYATLGSEGS-DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 A EYEV F +R +GL ++ D+YG +A V+GF+ ++G GPA+ GL+ +GDVL GV + V L F + V++ GQ LTF E + D E+ +AR +IH+QK R+Y PP P+ + +VYC +ER RG +FHL R+DTGEFL A +V A G +FHTL+DTHLR + IPT+ DSAVYLGC++P+LLGT F +HR DP D + +NEL+ V YE NVMGRVPN MKV++ RP AT+++ + +G+ E K + + + + ++ NI N E D N+ Y + + D++ FET P WNE + AWTLNFNGRVKIPSKKNF + E N +ME +FGE V++R GKM+KSRFS+DFRHP+SP+VAL + S+FA+KM+VT Sbjct: 4 AGEYEVTF--------DRGPVGLRLETDWYGRKACVRGFTKINGEDGPAKKSGLVHIGDVLAGVNEQSVLDLPFREAMEVLKGVSA--GQHTLTFKAAEAVGELGAYLPDREVTDARRYIHEQKERFYLPPEPTVEGGEHQIVYCCVERRRGADSLAFHLLREDTGEFLCAATVAADRTGKFIFHTLRDTHLRPVDRIPTNQDSAVYLGCLVPSLLGTTFTLYNHRPDPHTDLQTKQGRAAAVENELAYVSYETNVMGRVPNFMKVVVPRPARATEAA--------------------------------AARRGL--EQRYKTFRRQRQLGHLGMKLKAEVEKVFNIESNEEIQD-----FNREYTAVEQDNQQDLMIFETKRPVWNEQIQAWTLNFNGRVKIPSKKNFFIQAELDNHIMESEFGED-VYLRFGKMTKSRFSLDFRHPLSPVVALAIAASSFADKMLVT 423
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A5D6XV38_9STRA (PDZ domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XV38_9STRA) HSP 1 Score: 303 bits (775), Expect = 2.610e-86 Identity = 186/501 (37.13%), Postives = 276/501 (55.09%), Query Frame = 1 Query: 457 YEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEM--VEARWFIHQQKARYYRPP--PPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLL-RRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDE--PIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFESD---------------DPEEQRANQHYATLGSEGS---------------------DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 Y++ F ER +GLA++ D+YG QA+VKGF DG PA+ CG+I +GDVL + + +SF TL +R+ R + + TG+ + V +S+M ++A+ FIH+ K R+YRPP P+ +++ +ER RGE VT+F+ +R+DTGEFLLACS GP LFHTLQD+H R+ + +P S DSAVYLG M+PN LGTEF LDH+ K +NEL +VY NV+GRVPN +K++ R+P A G D D+ G D +S + + I +R+++ + + + + L+TF F ES D E R + G++ S D++TFET P+WN+ L AWTLNF+GRVK+ SKKNFL+ PE+G+ ME +F + +V +R GK++KSRFS+D++ P+ P++AL + C++FA+K+ VT Sbjct: 279 YDITF--------ERGPIGLALETDWYGRQAVVKGFKDDDG---PAKQCGVIRIGDVLTAIDGESCLEMSFQETLAKLRQVSSCRHVLHFKSLEATGDLS---VYNSDMGILQAKQFIHEHKERFYRPPCRTPTGELILGCVERLRGETVTAFNFHREDTGEFLLACSCVNECTGPFLFHTLQDSHQRDFKSLPQSEDSAVYLGQMVPNFLGTEFTVLDHQ-------------QKRRNELGLLVYSSNVLGRVPNFLKIVFPRQPPAIDDEGEDNNINDDGGRDRASSAWSSSSAGSGST-PLSRRSTMTGQNGSIAERYKNVRQQRRVSL--VERLRTF--SFDELESSLEYTGGGDETTWRDSDDHESRPRSMNLSSGTQRSASAQSLSATPYGLVEQTDYQCDLLTFETKKPAWNDELGAWTLNFHGRVKLASKKNFLLVPEQGSAHMEAEFPDERVFLRFGKVAKSRFSLDYQAPICPMLALAIVCTSFAHKIAVT 747
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A8K1C842_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C842_PYTOL) HSP 1 Score: 291 bits (745), Expect = 4.240e-83 Identity = 182/499 (36.47%), Postives = 261/499 (52.30%), Query Frame = 1 Query: 436 PRASAREYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPP--SEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGV-SVEKGVWDE--PIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFES----------DDPEE-------------QRANQH----YATLGSEG--SDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 P S Y+V F + +GL ++ D+YG QA+VKGF + G A+ CG+I VGDVL + + LSF TL +R + R + + G+ +D+++++A+ FIHQ K ++YRPP P ++ +V +ER GE VT+F+ +R+DTGEFLLACS G +FHTLQD+HLR RD+P S DSAVYLG M+PN LGTEF LDH+ K +NE+ + Y NV+GRVPN +KV + + + ++ D +G + + + D I R++ K + + +I NF++ DD + A +H Y + E D++ FET PSWNE L AWTLNFNGRVK+PSKKNFL+ E+GN ME +FGE ++R GK+SK+RFS+DF+ P++P +AL + S FA KM VT Sbjct: 171 PLRSYDSYDVTFA--------KGPIGLELETDWYGRQAVVKGFKQIKNEDGVAKTCGVIRVGDVLTAINGESCLELSFQETLAKLRTVSKGRHTLHFKSLEAAGDLGIYN-QDTDIIQAKKFIHQHKEKFYRPPAPLPNKQLVNGCVERLVGETVTAFNFHREDTGEFLLACSCLNEKTGVFVFHTLQDSHLRGFRDLPQSEDSAVYLGQMVPNFLGTEFTLLDHQ-------------QKRRNEIGFIEYSTNVLGRVPNFLKVAFPKQRTLEETENE----DEQGSPTRPRAVTVGATGMGRNNAIFNTHSNMMDRNGTISDRYKRLKQTRQIPLVERLRSFSLDDIEVNFDTGGSKFRSGWHDDDDHAAHARAMRLKQLRSAAARHTSTPYGAVEQEDYDCDLLVFETRKPSWNEELGAWTLNFNGRVKLPSKKNFLIVAEEGNENMEAEFGEQTSYLRFGKVSKTRFSLDFQAPITPFIALAIATSAFARKMAVT 643
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: K3X577_GLOUD (PDZ domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X577_GLOUD) HSP 1 Score: 290 bits (743), Expect = 1.070e-81 Identity = 179/493 (36.31%), Postives = 262/493 (53.14%), Query Frame = 1 Query: 457 YEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRV--GPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPS--EDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEP--IIKRWEDAKN----------RHKPAFRPSSPLKTFRNIFKNFESDDPEEQRANQHYATLGSEGS-------------------DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 Y+V F E+ +GL ++ D+YG QA+V+GF V G GPA+ CG+I VGDVL + ++F TL +R + + + + G+ + D ++++A+ FIH+ K ++YR PP S +++Y +ER RGE VT+F+ +R+DTGEFL+ACS G LFHTLQD+HLR+ +D+P + DSAVYLG M PN LGTEF LDH+ K NEL +VY NVMGRVPN +K + R Q DG AD DD +V + D I +R++ K RH + L+ D+ + + S + D++TFET P+WN+ L AWTLNF+GRVK+ SKKNFL+ PE+GN ME +F + +V++R GK+SK+RFS+D++ P+SP++A+ + CS+FA+K+ VT Sbjct: 294 YDVTF--------EKGPIGLELETDWYGRQAVVRGFKPVGGNYEEGPAKRCGIIRVGDVLTAINGASCLEMNFQDTLARLRAVSKGKHVLHFKSLEAAGDLSMYN-NDLDIIQAKKFIHEHKEKFYRQPPASANNELIYGCIERIRGETVTAFNFHREDTGEFLMACSCVNEGTGVFLFHTLQDSHLRDFKDLPQNEDSAVYLGQMAPNFLGTEFTVLDHQ-------------QKRCNELGFLVYSSNVMGRVPNFLKCVFPR----QPPVIDGDEADAN-DDSTTASGAISSGMGSNSASFNVHNTMMDRNGNISERYKKLKQSRTLSIVERLRHFSLDDLETSLEYAGGSIDAIWHDEDDHDGCARSMRMKNSRSTSARDMLTPYGAVEQNDYQCDLLTFETKKPAWNDELGAWTLNFHGRVKLASKKNFLLVPEQGNEQMETEFADERVYLRFGKVSKTRFSLDYQAPISPLLAVAIVCSSFAHKIAVT 759
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A1V9YXY2_9STRA (ATP-binding Cassette (ABC) superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXY2_9STRA) HSP 1 Score: 283 bits (723), Expect = 1.430e-81 Identity = 164/465 (35.27%), Postives = 245/465 (52.69%), Query Frame = 1 Query: 451 REYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVDGRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRP--PPPSEDMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRP--VATQSSGSDGLTADNE-GDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFESDDPEEQRANQHYATLGSEGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 R Y+V F ER +GL ++ D+YG VKGF VDG+ G A+ ++CVGDV+ + D+ ++F TL +R+ + + T + G E R D ++ A+ +I + K ++YR P E ++Y +ERH GE V + H +R+DTGEFLLACSV + GP LFHTLQD+H RE +D+P D+A Y+G MLP LGTEFR LDH ++E+ ++Y+ NV+GR+PN++ ++L R +A + ++ + W +E V + + R P +P K + ++ A E D++ FET PSW+E L+AWTLNF GRV SKKNFL+ + GN ME++FG + +R GK+SK+RF++DF+ P+SP++AL + STFA K VVT Sbjct: 74 RSYQVTF--------ERGPIGLELEADWYGMHVTVKGFQKVDGKDGLAKMSKVVCVGDVIHAINDETCLDMTFDETLEKLRQVSKSMHTLHFTSLSGLNEMKSFR-HDKDISLAKQYIQKHKTKFYRSLRKPGHEGLLYGCIERHCGEEVIALHFHREDTGEFLLACSVQSDYLGPFLFHTLQDSHHREWKDLPQQEDNAAYIGQMLPTFLGTEFRILDHNTAQ-------------EHEIGFLIYDTNVLGRIPNSLTLVLGREEDIAAKYFNRPSISERFKLRQSNRIYSPSATIFERIRSWSHDLESLV--DNLTSPTHSLATRKMPVTPTRAPEKLV---------------KTTEYGALEQDEHGDLLYFETKKPSWSEELNAWTLNFQGRVTSASKKNFLLCSQVGNEAMEEEFGADMIALRFGKISKARFTLDFQAPLSPMLALAIAASTFAKKRVVT 499
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A225X0F5_9STRA (ABC transporter n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X0F5_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.130e-75 Identity = 177/511 (34.64%), Postives = 265/511 (51.86%), Query Frame = 1 Query: 436 PRASAREYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVD--GRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPSE-----DMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKRWEDAKNRHKPAFRPSSPLKTFRNIFKNFESDD---PEEQRAN--------------------------QHYATLG--SEGS--------DIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 P+ + Y+V F + +GL ++ D+YG QA+VKGF ++ G GPA+ CG+I VGDVL + + ++F +TL +R A + + + G+ + D ++V+AR FIHQ K R+YRPPP ++ +MV +ER RGE VT+ + +R++TGEFLL+ S + GP +FHTL+D+HLR +R++P S DSAVYLG + P+ LGTEF DH + NEL+ +VY NV+GRVPN++K ++ +PV + D L + N + G+ + +++ ++ A + + S + KNF +D P E AN + A++G S G+ D++ FET PSWNE L AWTLNF GRVK+ SKKNFL+ GN E + +R GK+SK+RF++D+ P++P+ AL V CS FANK VVT Sbjct: 254 PKRNYDSYDVTF--------DHGPVGLDLETDWYGRQAVVKGFRAINTAGDEGPAKRCGMIRVGDVLTAINGESCLEMNFQATLEALRLAGKSIHTLHFKSLEAAGDLSIY-ASDKDVVQARAFIHQHKERFYRPPPVTDGANPHEMVLGCVERLRGEFVTALNFHREETGEFLLSASCASDGSGPFIFHTLRDSHLRTMRELPQSEDSAVYLGRLEPSFLGTEFTLFDHHTSSQHH----------DNELAFLVYSANVLGRVPNSLKCVVSKPVEDKQD-EDDLVSPNT-----------PTAIRQQRSGMGTDGAIFNTHRVRLDRSASLSDRFNRQQQSRSMSITERLKNFTLEDLDVPIEMAANALGWLDDDDVEGQARSMRIKQARLKGERTASMGQISYGAVEQEEYAKDLLVFETKQPSWNEELGAWTLNFQGRVKVASKKNFLLV---GNDTNENGEEQEITALRFGKVSKTRFTLDYAAPLAPVQALAVACSAFANKRVVT 730
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: W2QRU3_PHYPN (PDZ domain-containing protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QRU3_PHYPN) HSP 1 Score: 266 bits (680), Expect = 1.230e-75 Identity = 179/513 (34.89%), Postives = 262/513 (51.07%), Query Frame = 1 Query: 436 PRASAREYEVVFGLSGNNPGERPDLGLAMQCDYYGNQAIVKGFSLVD--GRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPSE-----DMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIK-----RWEDAKNRHKPAFRPSSPLKTFRNIFKN----------------FESDDPE---------------EQRANQHYATLGS-----EGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 P+ + Y+V F ++ +GL ++ D+YG QA+VKGF ++ G GPA+ CG+I GDVL + + ++F TL +R A + R + + G+ + D ++V+AR FIHQ K R+YRPP E ++V +ER RGE VT+ + +R++TGEFLLA S + GP +FHTL+D+HLR +R++P S DSAVYLG + P+ LGTEF DH NEL+ +VY NV+GRVPN++K ++ +PV Q D L A N+ + G+ + V++ + D NR + + R S + R+I + + DD E E+ A+ + G+ D++ F+T PSWNE L AWTLNF GRVK+ SKKNFL+ + N E E +R GK+SK+RFS+D+ P++PI AL V CS FANK VT Sbjct: 11 PKRTYDSYDVTF--------DQGPVGLDLETDWYGRQAVVKGFRAINAAGDEGPAKRCGMIRTGDVLTAINGESCLEMNFQETLEALRRAGKSRHTLHFKSLEAAGDLSIY-ASDKDVVQARAFIHQHKQRFYRPPQVKEGASPHELVLGCIERLRGEFVTALNFHREETGEFLLAASCASDGTGPFIFHTLRDSHLRTMRELPQSEDSAVYLGRLEPSFLGTEFTLFDHHTGTNHD-----------NELAFLVYTANVLGRVPNSLKCVVSKPVNEQVE--DELEALNK-----------LVSLRQQRSGMGSDGAVFNTHKAQFGRNSSLSDRFNRQQQS-RGMSLTERLRSITLDDLDLRLEMATDGALSWLDDDDVEGHSRSMRVKQARLRGERTASMGQISYGAVEQEEHEKDLLVFDTKQPSWNEELGAWTLNFQGRVKVASKKNFLLVGHETN---EHGDEEESTALRFGKVSKTRFSLDYAAPLAPIQALAVACSAFANKRAVT 486
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Match: A0A8J5IVE8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IVE8_9STRA) HSP 1 Score: 267 bits (682), Expect = 4.460e-75 Identity = 179/486 (36.83%), Postives = 251/486 (51.65%), Query Frame = 1 Query: 511 GLAMQCDYYGNQAIVKGFSLVD--GRVGPAQACGLICVGDVLVGVGDDRVKGLSFPSTLGVVREACRERGQIRLTFMPGTGEENKPRVEDSEMVEARWFIHQQKARYYRPPPPSE-----DMVYCSLERHRGEHVTSFHLNRDDTGEFLLACSVDASLQGPMLFHTLQDTHLRELRDIPTSSDSAVYLGCMLPNLLGTEFRQLDHRVDPRDSAVMEYIKDKGKNELSAVVYEPNVMGRVPNAMKVLLRRPVATQSSGSDGLTADNEGDDXXXXXXXXXXXXXXXQWGVSVEKGVWDEPIIKR---WEDAKNRHKPAFRPSSPLKTFRNIFKN----------------FESDDPE---------------EQRANQHYATLGS-----EGSDIITFETLSPSWNEVLHAWTLNFNGRVKIPSKKNFLVAPEKGNLVMEQDFGEGKVHIRHGKMSKSRFSVDFRHPVSPIVALGVCCSTFANKMVVT 1830 GL ++ D+YG QA+VKGF ++ G GPA+ CG+I VGDVL + + ++F TL +R A + R + + G+ + D ++V+AR FIHQ K R+YRPP +E ++V +ER RGE VT+ + +R++TGEFLLA S + GP +FHTL+D+HLR +R+IP S DSAVYLG + P+ LGTEF DH NEL+ +VY NV+GRVPN++K ++ +PV Q DGL A N+ + G + + R D NR + + R S + R+I + + DD E E+ A+ G+ D++ F+T PSWNE L AWTLNF GRVK+ SKKNFL+ GN E E +R GK+SK+RFS+D+ P++PI AL V CS FANK VT Sbjct: 102 GLDLETDWYGRQAVVKGFRAINAAGDEGPAKRCGMIRVGDVLTAINGESCLEVNFQETLEALRRAGKSRHTLHFKSLEAAGDLSVY-ASDKDLVQARAFIHQHKQRFYRPPRVNEGTNPHELVLGCVERLRGEFVTALNFHREETGEFLLAASCASDGSGPFVFHTLRDSHLRTMREIPQSEDSAVYLGRLEPSFLGTEFTLFDHHTGSTHD-----------NELAFLVYSANVLGRVPNSLKCVVSKPVNDQHD-EDGLEAPNK---------PSSLLQQRSEMGSDGAVFNTHQARLGRSSSLSDRFNRQQQS-RGMSITERLRSITLDDLDLRFEMATDGALSWLDDDDVEGHSRSMRVKQARLRGERTASMGEIPYGAVEQEEHEKDLLVFDTKQPSWNEELGAWTLNFQGRVKVASKKNFLLV---GNETKENGEEEEITALRFGKVSKARFSLDYAAPLAPIQALAVACSAFANKRAVT 561 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig10.465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.465.1 >prot_C-linearis_contig10.465.1 ID=prot_C-linearis_contig10.465.1|Name=mRNA_C-linearis_contig10.465.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=541bp MASMDLLDLGFDSVEIDAPSDGADGNQAGEEGGGGGQGQPAGMSTISFNAback to top mRNA from alignment at C-linearis_contig10:936681..945516- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig10.465.1 ID=mRNA_C-linearis_contig10.465.1|Name=mRNA_C-linearis_contig10.465.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8836bp|location=Sequence derived from alignment at C-linearis_contig10:936681..945516- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig10:936681..945516- >mRNA_C-linearis_contig10.465.1 ID=mRNA_C-linearis_contig10.465.1|Name=mRNA_C-linearis_contig10.465.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3246bp|location=Sequence derived from alignment at C-linearis_contig10:936681..945516- (Chordaria linearis ClinC8C monoicous)back to top |