Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 207 |
| Cds size | 207 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927322.3316386-CDS-C-linearis_contig10:852141..852191 | 1622927322.3316386-CDS-C-linearis_contig10:852141..852191 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 852142..852191 - |
| 1690879625.804643-CDS-C-linearis_contig10:852141..852191 | 1690879625.804643-CDS-C-linearis_contig10:852141..852191 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 852142..852191 - |
| 1622927322.345342-CDS-C-linearis_contig10:853214..853371 | 1622927322.345342-CDS-C-linearis_contig10:853214..853371 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 853215..853371 - |
| 1690879625.8133428-CDS-C-linearis_contig10:853214..853371 | 1690879625.8133428-CDS-C-linearis_contig10:853214..853371 | Chordaria linearis ClinC8C monoicous | CDS | C-linearis_contig10 853215..853371 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig10.458.1 >prot_C-linearis_contig10.458.1 ID=prot_C-linearis_contig10.458.1|Name=mRNA_C-linearis_contig10.458.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=69bp
ARTSRRRTERAASEADESGRRSGRGGDGFDGRERGDGSDSQAGPDKCRSR
NTVRGHLERAGFELGPLRE back to topmRNA from alignment at C-linearis_contig10:852142..853371- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-linearis_contig10.458.1 ID=mRNA_C-linearis_contig10.458.1|Name=mRNA_C-linearis_contig10.458.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=1230bp|location=Sequence derived from alignment at C-linearis_contig10:852142..853371- (Chordaria linearis ClinC8C monoicous)
GCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAGCGGACGA
AAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGTCGCGAGC
GTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAGATCCCGA
AACACAGGTGAGAGATGTTTCTCCCCGCTTGTTTTTTAGCGCTTCACTAG
GCGACCGCCGCGATAGTTTCACCGCGACCACAGCGCCTTAGGGCCGTGGG
GGGGCACACTGGGTACAGTTCCGCGCGGTCGATAGATTTTGGTTCGAGGC
GGCGGTCGGCCACGCCACACCCTTTTTCTTTTGTTTGATTTTCGAAATAC
GTGTGTTGTACAGGTCAATTACGCCCAAAACGTTTTTCTCTTTTTTCTTT
CCCGCAAAAAATGTTTGCTCACCGCTGCGGCGCACCCCCCCCCCCGCGCT
TTTCCCGCACCCGCAACAGGCGCCCACGTTTTCCCATTGCCGCGGACGCC
GCCCAATCCTAGCCTAGCCGCACCCCACACACCGTGTTATCCTCACACAC
CAGCCCCGTTTTTTTCACCATGGGCAGTAGGAATCTTGCGGCAGTGTGTA
AATACACGGCAGTAGGCTAAAACACGCACAGCAGTTGCCAAAACGTGTCC
GTCGCCGCACACAATCAACGCAAAACATAAGCACGAACGCACGCCCATTT
TCTCTCGACAAAGTGTACGTATTTTTAGCCTCACACACACACCTCTCATC
GCTGTCGTCGCACACAGACCAATCGATGTTTCTCCTTCATTTCCCTTTTA
CACGGCATGATCACACGCCCCCCGATTTTCCCCGGTGTTCTCCTGCCCTC
TCTTTTACACGGCACCAGCACACGCCCTCCCACCATTTTCCTTTTTTTAC
ACGGCGAGCTCACAGGCACTCTTTTTCTTGCCATCCCTCTTTTTTACACG
GCGCGCAATTTTACACGGAACCGGCTACATCACAAGCTTTTTCGCCCCTT
TTCCTCTTTACTCGGCTCCAGCCCACGCACTCCGCATTCTCACCCCCCCT
CCCGCCTTTTTTCCCTCACCTTTACACGGCGCCGCCACACACTTTCCACC
TTCTTTCCATCACACGGAACGCGCACATGCCCACCGACTCCCGCCCCCTT
TACCCCTGTTTCACCGCCCCGATTCCCAAGTTCGCGGGCACCTGGAACGG
GCTGGTTTCGAGCTCGGCCCACTTCGAGAA back to topCoding sequence (CDS) from alignment at C-linearis_contig10:852142..853371- >mRNA_C-linearis_contig10.458.1 ID=mRNA_C-linearis_contig10.458.1|Name=mRNA_C-linearis_contig10.458.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at C-linearis_contig10:852142..853371- (Chordaria linearis ClinC8C monoicous)
GCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAGCGGACGA
AAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGTCGCGAGC
GTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAGATCCCGA
AACACAGGCCCGAACCAGCCGGCGGAGAACAGAGCGAGCAGCCAGCGAAG
CGGACGAAAGCGGACGCAGGAGCGGGCGGGGCGGTGACGGTTTCGACGGT
CGCGAGCGTGGCGACGGCTCCGACAGCCAAGCGGGCCCTGACAAATGCAG
ATCCCGAAACACAGTTCGCGGGCACCTGGAACGGGCTGGTTTCGAGCTCG
GCCCACTTCGAGAATTCGCGGGCACCTGGAACGGGCTGGTTTCGAGCTCG
GCCCACTTCGAGAA back to top
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