mRNA_C-linearis_contig1.12.1 (mRNA) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A6H5KUQ1_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUQ1_9PHAE) HSP 1 Score: 1371 bits (3549), Expect = 0.000e+0 Identity = 734/827 (88.75%), Postives = 758/827 (91.66%), Query Frame = 1
Query: 418 TETIDGGTQTVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYAAAEGEMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQAKGDTT------GAELLATQ-PPQXXXXXXXXXXXXXXGSLTSPN-DAREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRVLNNYYSAGNSRN--------------TXXXXXXXXXESLTSSSFSTRSNGVSSSGRPGVAGAGGRRFGAGL 2832
TETI+GGTQ+VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYA+AEGEMRLLEIE+GEAEGAGGE DRLP+VYDP+ALK+YFARRPQVATRRTLQLAGAFSGFV YLLDL RGKVKENEIARAIQLR+IITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTME+EYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECA+GV IR+QMQHIKQVVVP+NYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQAKGD T G+ L T XXXXXXXXXX ++TSP+ DAREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLL+AVTPKLSDEDRKVVDNTNKLLAFLLGNLQDES+ QRQTPVNPAQGLFGLRVATPPFNLL LG+S R TALREEL PV+RELGPEMR+FGLQVVGRLTEKLATRVLRYTSGRVLNNYY+ G T + TSSSFSTR NGVSS GR VA GGR+FG GL
Sbjct: 122 TETINGGTQSVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYASAEGEMRLLEIEDGEAEGAGGETDRLPVVYDPEALKDYFARRPQVATRRTLQLAGAFSGFVTSYLLDLVRGKVKENEIARAIQLREIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMELEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECANGVAIRDQMQHIKQVVVPFNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQAKGDKTTPTQQTGSALATTTLAAXXXXXXXXXXXPGRVAAVTSPSSDAREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLRAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESQTNQRQTPVNPAQGLFGLRVATPPFNLLGLGTSARGTALREELAPVIRELGPEMREFGLQVVGRLTEKLATRVLRYTSGRVLNNYYNDGGGEGRRGTSRGGPGGQYGTRASPAAAGAGAATSSSFSTRGNGVSSPGR--VARPGGRKFGEGL 946
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A836CGN4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN4_9STRA) HSP 1 Score: 876 bits (2263), Expect = 9.100e-308 Identity = 464/722 (64.27%), Postives = 535/722 (74.10%), Query Frame = 1
Query: 520 MQALRGAGIRDYAAAEGEMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQAKGDTTGAELLATQPPQXXXXXXXXXXXXXXGSLTS--PNDA----REALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPP-FNLLDLGSSPRSTA--LREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGR 2658
M A+RGA + DY A+GEMRL++++E + E +LP+VY P+ L+EY+ RRP + +RTLQLAGAF GF+ +D ARG +K NE+ RA +LR+IITSLGPFYIKLGQALSIRPDILSP AMVELQRLCDKVPS+DS IA T+E E G+PV E++ +ITPEPLAAASLGQ RTDLVALLDEFA RF++ELDY KEC +G+ IR M HI QVV+P+NYPEFT+RRVF +EWIDGEKLSQS+A DV LVNVGV AYLTQLLDTG FHADPHPGNLIRTP+G+LAILDFGLMT+ITD+QK+GMIEAISHLVHRDY IGDDFKRLDFIP VDVTPI+PAL NVF+ ALAGGGAKSINFQ LA DLAQITF+YPFRIPPYFAL+IRAIGVLEGIALVGNP FAI+DEAYPYISKRLLTD+SPRLR ALRYMIYGKS+VFDVERLIDLLQA ESF D + A G++T P+ A REALRFLF KDGEFFREFL DEVV+GADC+GRDAARELA+TVGLRG+N+P +KA P LS +DRKVVDNT +L+AF +G+ R TP +PA+GLFGLRV P +LL +G + A L+ E+ PVLRELGPEMR FGL +VGRLTEKLATRVLRYTS R
Sbjct: 1 MDAMRGAALSDYDVAQGEMRLIDVDETDEE-------KLPLVYQPEILEEYYKRRPHLVVQRTLQLAGAFGGFMTSLAIDAARGTLKTNEVKRAAELREIITSLGPFYIKLGQALSIRPDILSPKAMVELQRLCDKVPSYDSKIAMATIERELGKPVLEVYSEITPEPLAAASLGQ-----------------------------------------------GRTDLVALLDEFAYRFYEELDYQKECENGIRIRADMAHIAQVVIPFNYPEFTSRRVFTAEWIDGEKLSQSQAGDVNTLVNVGVVAYLTQLLDTGLFHADPHPGNLIRTPDGRLAILDFGLMTEITDDQKYGMIEAISHLVHRDYGSIGDDFKRLDFIPAHVDVTPIVPALKNVFDAALAGGGAKSINFQDLAGDLAQITFEYPFRIPPYFALVIRAIGVLEGIALVGNPSFAIIDEAYPYISKRLLTDESPRLRAALRYMIYGKSDVFDVERLIDLLQAFESFVEIRDDKAGVVAAN-----------------GGTMTGAEPDSAAEQTREALRFLFSKDGEFFREFLTDEVVRGADCIGRDAARELAYTVGLRGANIPGFIKAAAPPLSSDDRKVVDNTRRLIAFFMGDAASGFAANDRPTPYDPAEGLFGLRVNLPAALDLLGVGGRRDTPASRLQAEIAPVLRELGPEMRAFGLTIVGRLTEKLATRVLRYTSDR 651
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: W7TPJ3_9STRA (AarF domain-containing protein kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPJ3_9STRA) HSP 1 Score: 806 bits (2082), Expect = 1.390e-277 Identity = 440/767 (57.37%), Postives = 543/767 (70.80%), Query Frame = 1
Query: 457 MSAQMSQMRKDLEENEEAQAYMQALRGAGIRD--YAAAEGEMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQAKGDTTGAELLATQPPQXXXXXXXXXXXXXXGSLTSPNDAREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLG----NLQDESKGKQRQTPVNP----AQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRD---------------------FGLQVVGRLTEKLATRVLRYTSGRVL 2664
MS QM Q+R+D+E++E Q +Q LRG + D AAA M ++E++EG E D LP+ Y P L+ YFA+RP +R Q+ SGF+A D A +++NE+ RA QLRDIITSLGPF IKLGQALSIRPDILSP AMVELQ+LCDKVPS+D+ +A T+E E G+PV+E+F ++T +P+AAASLGQVYK LR+ G+ VAVKVQRP VLETVSLDL+L R LG Q++K PFL +RTDLVALLDEFASRF+DELDYV EC +G+++ M I+QVVVP +PE+ +R+V V++WIDGEKLSQS A DVQDLVNVGV AYLTQLL+TG FHADPHPGNLIRTPEGKL ILDFGL ++T++Q++GMIEAISHLVHRDY IG+DF+ LDFIP+ D+TPIIPAL+ VF+ ALAGGGAKSINFQ L++DLA+ITF YPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTD+SPRLR AL+YMIYGK VFDV+RLIDLLQA E+ +A E L Q + G+ N R+ALRF F +G+FFREFLLDE VKG D + R+ R++A ++G +G VP +LKA+ P LS +DRKVV+N KLL F LG +L G +P A GL G R N + L S AL PVLR G + R+ +GLQVVG+LT+++A+R+LR+T ++L
Sbjct: 78 MSEQMRQVREDMEKDENVQLLLQGLRGQALNDDNSAAAGTNMLIVEMDEGTGE------DVLPLTYQPAKLEAYFAKRPAAVRKRLFQILSISSGFLAQVAFDAATNNLEKNEVKRAGQLRDIITSLGPFSIKLGQALSIRPDILSPRAMVELQKLCDKVPSYDNALAMATIEKELGKPVDELFSELTKDPVAAASLGQVYKGKLRTTGEEVAVKVQRPFVLETVSLDLYLIRNLGLQLRKFPFLKDRTDLVALLDEFASRFYDELDYVTECQNGIMMHADMASIEQVVVPLPFPEYCSRKVHVAQWIDGEKLSQSTASDVQDLVNVGVVAYLTQLLETGRFHADPHPGNLIRTPEGKLCILDFGLQCEVTEDQRYGMIEAISHLVHRDYTRIGEDFQTLDFIPKGTDLTPIIPALSKVFDAALAGGGAKSINFQDLSADLAEITFKYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDESPRLRAALKYMIYGKEGVFDVDRLIDLLQAFEALEAVNQY---ETLGVQNGRAGASMSPAAALAEAGNT---NSVRDALRFFFSPEGQFFREFLLDETVKGVDAVSREGLRQVATSIGFKGPLVPPVLKAMVPPLSKKDRKVVENVQKLLDFFLGVGSADLLSTGNGNGNGPMFSPTFGFAPGLRGNRG-----NSVGLVGGLLSNAL-----PVLRGRGQQTREQLELARELAXXXXXXXXXXXQYGLQVVGKLTDRVASRILRFTREQLL 822
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A8J5XIN9_DIALT (Protein kinase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIN9_DIALT) HSP 1 Score: 759 bits (1960), Expect = 2.130e-259 Identity = 420/792 (53.03%), Postives = 526/792 (66.41%), Query Frame = 1
Query: 448 VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDYAAAEGEMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTM--EIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA---------------KGDT------TGAELLATQP---------------------------PQXXXXXXXXXXXXXXG---------SLTSPNDAREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRY 2646
V +MS +++ +R + E+E+ + MQALRG + D A+ +++ + + GA D+LP++++P LK YFA+RP R LQ+A +G G LLDLA G ++ E+ RA LR I SLGPF+IKLGQALSIRPD+LSP AMVELQ+LCDKVPSFD+ +A T+ E++ + V ++F +ITP P+AAASLGQVY+ATLR +G VAVKVQRP VLETVSLDLHLARELG +++ P L++R DLV LLDEF SRF+ ELDYV EC +G IR +M + VV+P NYP TTRRV V+EW++GEKLSQSKADDV LVN+GV YL+QLLD+GFFHADPHPGN++RTP+G+L ILDFGLMT+ITD+QK+GMIEAI+HL+HRDY IG DF LDFIP+ D+ PIIPAL+ VF+ ALAGGGAKSINFQ LA+DLAQITFDYPFRIPPYFAL+IRAIGVLEGIALVGNP FAIVDEAYPYISKRLLTD+SPRLR AL+YM+YG+S+ FDV+R+IDLLQALE + A +GD + A QP P G SL S REAL F F ++G FREFLLDEV + D L RDA ++ F VGLRG +P LL+A+ P ++D+DRKVV+N ++L+ FLLG+ + P G R R A + L+PVLRE P MR+FGL +V RLTEK A+R +
Sbjct: 48 VSDMSKELADVRARMMEDEDTRLMMQALRGQNLNDNLQADAGVQMDVVRMRASTGAD---DQLPLLFEPHTLKRYFAKRPGAVLTRVLQIASKSAGLALGVLLDLAVGNTEDIEVRRAADLRRTIISLGPFFIKLGQALSIRPDVLSPRAMVELQQLCDKVPSFDNELAMRTICDELKVAQ-VSDVFSEITPAPVAAASLGQVYRATLRESGDIVAVKVQRPYVLETVSLDLHLARELGLLLRRFPALSKRLDLVELLDEFGSRFYAELDYVVECQNGERIRREMAKMPMVVIPTNYPRHTTRRVHVAEWVEGEKLSQSKADDVGALVNLGVIVYLSQLLDSGFFHADPHPGNMLRTPDGRLVILDFGLMTEITDDQKYGMIEAIAHLIHRDYALIGQDFVNLDFIPKGTDLAPIIPALSRVFDAALAGGGAKSINFQELAADLAQITFDYPFRIPPYFALVIRAIGVLEGIALVGNPNFAIVDEAYPYISKRLLTDESPRLRAALKYMVYGRSDTFDVDRMIDLLQALEKYAAVRDNGDGSAFKVDGKRGDVVLGSAGSFAGTRTLQPHAALSNGGNXXXXXXXXAHTVARGGLVPTGASGERADLAAAPTGGAAXXXXXXSLVSAASTREALDFFFSREGRPFREFLLDEVTRSVDTLSRDAIAQIGFRVGLRGQQMPALLRALAPPVTDKDRKVVENISRLIEFLLGDFNSAA----------PTSGSVANRS--------------RQLAQLQALLPVLREYAPSMREFGLLLVTRLTEKQASRAFAW 811
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A7S1ZBW8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBW8_TRICV) HSP 1 Score: 759 bits (1961), Expect = 4.430e-259 Identity = 425/778 (54.63%), Postives = 531/778 (68.25%), Query Frame = 1
Query: 445 TVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDY-AAAEG-EMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVK--ENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA-----------------------KGDTTGAELLA-----TQPPQXXXXXXXXXXXXXXGSLTSPND---AREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTV---GLRGS-NVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRV 2661
TV + S MS+MR+++ ENE+ MQALRG + D EG +MRL++ + GA DRLP YDP ALK+YF+ RP RR Q+ GF LD GK K E E+ RA +LRD++TSLGPFYIK+GQALSIRPDILSP +MVELQ+LCDKVPS+D+ IAF T+E E G+ V ++F +ITPEP+AAASLGQVYKATLR+ G+ VAVKVQRPGVLETVSLDL LARELG ++K PF+A+R D VALLDEFA RF+ ELDY EC +G+ IREQM + VV+P N+P +T+RRV V+EWI+GEKLSQS AD+V LVN+GV YLTQLL+ GFFHADPHPGN++RT +GKLAILDFGLMT++TD+QK+GMIEAI+HL++RDY IG DF LDFIP+ D PI+PALT VF++ALAGGGAKSINFQ LA+DLAQITFDYPFRIPPYFAL+IRAI VLEGIALVGNP FAI+DEAYPYI++RL+TDDSPRLR ALRYM+YG+ FD ERLIDLLQALE F A GD G++ + T S +D REALRF F GE FR F+L+E+V D RDAARELA T+ GL GS VP ++A++P L+D+D++ V KL+ FLLG+ + + + R P + R+ LR+ L+PV+RE P++R++G ++ RL EK+A+R L + S R+
Sbjct: 83 TVSKTSEMMSRMREEMSENEDVNLMMQALRGQNMNDDDKQVEGLQMRLVDDD-----GASTGTDRLPYDYDPAALKDYFSSRPLTIARRIAQIVSVGGGFALRSALDNITGKQKDPEVEVKRAAELRDLVTSLGPFYIKIGQALSIRPDILSPRSMVELQKLCDKVPSYDTKIAFATIEKELGKSVTDVFSEITPEPVAAASLGQVYKATLRATGETVAVKVQRPGVLETVSLDLFLARELGLIVRKFPFVADRLDAVALLDEFAYRFYQELDYNLECENGLKIREQMSVLPDVVIPDNFPAYTSRRVHVAEWIEGEKLSQSTADNVGALVNLGVITYLTQLLEFGFFHADPHPGNMMRTTDGKLAILDFGLMTEVTDDQKYGMIEAIAHLLNRDYTEIGQDFINLDFIPKGTDTAPIVPALTKVFDVALAGGGAKSINFQDLAADLAQITFDYPFRIPPYFALVIRAISVLEGIALVGNPQFAIIDEAYPYIARRLMTDDSPRLRAALRYMVYGRDGQFDAERLIDLLQALEKFTAVRDEGDGSAFKVDGVRGSKVVGSAGDFAGSQKVDISDRDTDVGDGKFRVSAPQVANENQKQESEDDERTVREALRFFFSPGGEVFRNFMLEEIVTVVDASSRDAARELARTLLPPGLSGSIPVPRFVQALSPSLTDQDKQTVQQIRKLVQFLLGDFESALDPDGVDSADRNLNRMQRARQLFAP-------DARRNDRLRK-LIPVVREYAPQLREYGSLLLVRLGEKIASRGLNWASERL 847
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A7S2PDN7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PDN7_9STRA) HSP 1 Score: 754 bits (1948), Expect = 4.680e-259 Identity = 406/742 (54.72%), Postives = 515/742 (69.41%), Query Frame = 1
Query: 550 DYAAAEG-EMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVK--ENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA-----------------------KGDTTGAELL-ATQPPQXXXXXXXXXXXXXXGSLTSPND------AREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQ-----DESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRV 2661
D AAEG EMRL++++ G+ D+L VYDP++LK++F +RP V R +Q+ G + +D RGK+ E E+ RA +LRD ITSLGPF+IKLGQALSIRPD+LSP +MVELQ+LCDKVPSFDS IAF T+E E GR V++IF +ITPEP+AAASLGQVYKATLR G+ VAVKVQRP VLETVSLDL+LARELG + P L+ R D VALLDEFA RF+ ELDYV EC +G+ IREQM + VV+P N+P++T+RRV V+EW++GEKLSQS ADDV LVN+GV YLTQLL+ GFFHADPHPGN++RT +GKLAILDFGLMT++TD+QK+GMIEAI+HL++RDY IG DF LDFIP+ D PI+PALT VF++ALAGGGAKSINFQ LA+DLAQITFDYPFRIPPYFAL+IRAI VLEGIALVGNP FAI+DEAYPYI++RL+TD+SPRL+ ALRYM+YG+ FD E+LIDLLQALE F A GD +G++ + + ++ D REALRF F +G+ FR+FL++EVV D LGRDA RELA ++GL VP+ +A+TP LS+ D+K V+ KL+ FLLG+ + + + + AQ LF +S + LR+ LVPV+RE P++R+FG+ +V RL EK +R L + + R+
Sbjct: 4 DSMAAEGLEMRLVDVDSGD--------DKLMTVYDPESLKQFFRKRPGVIVTRIIQVISTTGGLMVKTGIDALRGKLSDPEAEVRRATELRDTITSLGPFFIKLGQALSIRPDVLSPRSMVELQKLCDKVPSFDSKIAFATIEKELGRSVDDIFSEITPEPIAAASLGQVYKATLRETGEIVAVKVQRPNVLETVSLDLYLARELGMFARNFPALSSRLDAVALLDEFAYRFYQELDYVLECENGLKIREQMSVLPMVVIPNNFPQYTSRRVHVAEWVEGEKLSQSTADDVGALVNLGVITYLTQLLEFGFFHADPHPGNMMRTNDGKLAILDFGLMTEVTDDQKYGMIEAIAHLLNRDYTEIGQDFINLDFIPQGTDTKPIVPALTKVFDVALAGGGAKSINFQELAADLAQITFDYPFRIPPYFALVIRAISVLEGIALVGNPNFAIIDEAYPYIARRLMTDESPRLKAALRYMVYGRDGYFDAEKLIDLLQALEKFSAVRDEGDGSAYKVDGYRGGVYVGKAGDVSGSQAVDLSYRDDDVADGKFRVSETPTMAIQEKKDEDDEKTVREALRFFFSPEGQVFRDFLIEEVVVVVDALGRDAIRELARSIGLSALPVPSFFRALTPSLSENDKKTVEQIQKLVRFLLGDFEGIMGNELQSSNSSLSRMQRAQQLFA--------------NSQSNDRLRK-LVPVVREYSPQLREFGVLLVSRLNEKAVSRALNWATERI 722
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: B5YMB6_THAPS (Protein kinase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YMB6_THAPS) HSP 1 Score: 743 bits (1918), Expect = 1.720e-254 Identity = 405/758 (53.43%), Postives = 529/758 (69.79%), Query Frame = 1
Query: 448 VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRD--YAAAEGEMRLLEIEEGEAEGAG---------GEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKEN---EIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA---KGDTTGAELLATQPPQXXXXXXXXXXXXXXGSLTSPNDA--REALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRVL 2664
+REM +Q++ ENE+A MQALRG I D A EM+L+E ++ + +G G GE +RLP YDP AL+++F++RP + R Q+A + + +D GK+K + E+ RA +LRD ITSLGPF+IKLGQALSIRPDILSP +MVELQ+LCDKVPSFDS IAF T+E E G+PV ++F +ITPEP+AAASLGQVYKATLR+ G+ VAVKVQRP VLETVSLDL+LARELG ++ P L++R D VALLDEFA RF+ ELDY KEC +G +++EQM+ + VV+P NYP +T+RRV V+EWI+GEKLSQS A++V LVN+GV YLTQLL+ GFFHADPHPGN++RT +GKL ILDFGLMT+ITD+QK+GMIEAI HL++RDY IG DF LDFIP+ D TPI+PALT VF+ ALAGGGAKSINFQ LA+DLA+ITF+YPFRIPPYFAL+IRAIGVLEGIALVGNP FAIVDEA+P+I++RL+TDDSPRL+ AL+YM+YGK FD E LIDLLQALE F+A +GD + + ++ + ++A R AL+F FG +G FREF+L+EVV D GR+A++E+ +GL + + ++A++P LS ED+++V KL FLLG+ + G +T G + LR+ L+PV+RE P++R+FG + RL+EK +R L + S R++
Sbjct: 1 MREMQSQLTS------ENEDAALIMQALRGKNINDDDSQVAGLEMKLVEFDD-DLDGIGASASSTDINGEVNRLPYEYDPIALQKFFSKRPNLIVARIFQVATTGGNVLLNFAMDALTGKLKSDPDLEVRRAAELRDTITSLGPFFIKLGQALSIRPDILSPRSMVELQKLCDKVPSFDSKIAFATIEKELGKPVNDVFSEITPEPVAAASLGQVYKATLRATGETVAVKVQRPKVLETVSLDLYLARELGLFIRNFPALSDRLDAVALLDEFAYRFYQELDYQKECLNGEIMKEQMKVLPDVVIPKNYPTYTSRRVHVAEWIEGEKLSQSSANNVGALVNLGVITYLTQLLEFGFFHADPHPGNMMRTQDGKLCILDFGLMTEITDDQKYGMIEAIVHLLNRDYTEIGQDFINLDFIPKGTDTTPIVPALTKVFDAALAGGGAKSINFQDLAADLAEITFEYPFRIPPYFALVIRAIGVLEGIALVGNPNFAIVDEAFPWIARRLMTDDSPRLKAALKYMVYGKEGSFDAENLIDLLQALEKFKAVTDEGDGSAFKPAQSEEATRAGYSDVLGINIREEGQSERDEATVRGALKFFFGPEGYVFREFILEEVVNFVDASGREASQEVMMALGLNNLPMSSFIRAMSPSLSSEDKRMVQQMRKLSQFLLGDFE-------------------GALSST------GNGFQQNNQRLRQ-LLPVVREYAPQLREFGTLLGVRLSEKALSRGLNWASSRLV 725
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A7S3Q0F4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0F4_9STRA) HSP 1 Score: 744 bits (1922), Expect = 3.760e-254 Identity = 414/773 (53.56%), Postives = 517/773 (66.88%), Query Frame = 1
Query: 448 VREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDY-AAAEG-EMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVK-ENEIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA-----------------------KGDTTGAELLATQPPQXXXXXXXXXXXXXX----GSLTSPND------AREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGS-NVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSG 2655
V + S M +MR + ENE+A MQALRG G+ D +AAEG MRL+E + +G G LP YD + +KEY+ ++P + RR Q+ GF++ + D G+ + E+ RA +LRD+ITSLGPFYIKLGQALSIRPD+LSP +MVELQ+LCDKVPS+DSTIAF T+E E G+ V +IF +IT EP+AAASLGQVYKATLRS G+ VAVKVQRPGVLETVSLDL+LARE+G K P L++R D VALLDEFA RFF ELDY EC +G+ I+EQM+ + VV+P N+P++T+R+V V+EWIDGEKLS SKA DV LVN+GV YLTQLL+ GFFHADPHPGN++RT +GKLAILDFGLMT++TDNQK+GMIEAI+HL++RDY IG DF LDFIPE D PI+PALT VF++ALAGGGAKSINFQ LA+DLAQITFDYPF+IPPYFAL+IRAI VLEGIALVGNP FAI+DEAYPYI++RL+TDDSPRL+ AL+YM+YGK +FD ERLIDLLQALE F A GD G++ + T G L S REALRF F +G+ FREF+L+EVV D GRDA EL ++ + VP L+A+ P+LS ED+++V+ L+ FL G+ F L G+ + EL PV RE P++RDFG + RL+EK +R L + +G
Sbjct: 48 VSKTSDMMKEMRAQIAENEDANFMMQALRGTGMNDDDSAAEGVTMRLVEED---IDGGTG----LPYEYDAKIIKEYYGKKPWLVVRRIAQVISVGGGFLSSTVFDKILGRDDADTEVKRAGELRDLITSLGPFYIKLGQALSIRPDVLSPRSMVELQKLCDKVPSYDSTIAFATIERELGKTVGDIFSEITEEPVAAASLGQVYKATLRSTGEIVAVKVQRPGVLETVSLDLYLAREIGMFAKNFPALSDRLDAVALLDEFAYRFFQELDYNAECENGIRIKEQMKVLPMVVIPGNFPKYTSRKVHVAEWIDGEKLSSSKAGDVGALVNLGVITYLTQLLEAGFFHADPHPGNMMRTSDGKLAILDFGLMTEVTDNQKYGMIEAIAHLLNRDYSEIGQDFINLDFIPEGTDTRPIVPALTKVFDVALAGGGAKSINFQELAADLAQITFDYPFKIPPYFALVIRAISVLEGIALVGNPNFAIIDEAYPYIARRLMTDDSPRLKAALKYMVYGKEGIFDAERLIDLLQALEKFSAVRNEGDGSAFKVDGVRGSKVVGSAGDFAGSQTVDTSDRDTDVGDGRFRVDMAMNGNGGILDSSQKDDDEKTVREALRFFFSPEGQVFREFMLEEVVTVVDASGRDALLELQKSIPFANAIPVPGFLRALNPELSSEDKQMVEQIRVLIQFLFGD-----------------------------FELSGGGAGGDNNQRLRELAPVAREYAPQLRDFGSLLAVRLSEKTISRGLNWATG 784
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A448ZQ56_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ56_9STRA) HSP 1 Score: 742 bits (1916), Expect = 6.130e-253 Identity = 409/776 (52.71%), Postives = 514/776 (66.24%), Query Frame = 1
Query: 454 EMSAQMSQMRKDLEENEEAQAYMQALRGAGIRDY-AAAEG-EMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLDLARGKVKEN---EIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA-----------------------KGDTTGAELLATQPPQXXXXXXXXXXXXXXGSLTSPND-----------AREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSNVPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALR-EELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRV 2661
E A ++ +RK L ENE+A+ M ALRG + D A +G +MRL++I + G LP YDP AL+ +F +RP +R QLA G LD G++K+N EI RA +LRD ITSLGPFYIK+GQALSIRPD+LSP +MVELQ+LCDKVPS+DS +AF T+E E G+ V+EIF +ITPEP+AAASLGQVYKATLRS G+ VAVKVQRP VLETVSLDL LARE+G + P L +R D VALLDEFA RF+ ELDY EC +G+ I E M + VV+P NYPEFT+RRV V+EWI+GEKLSQSKADDV LVN+GV Y+TQLLD GFFHADPHPGN++RT +GKLAILDFGLMT+ITDNQK+GM+EAI+HL++RDY IG DF LDFIPE D +PI+PALT VF++ALAGGGAKSINFQ LA+DLA IT+++PFRIPPYFAL+IRAI VLEGIALVGNP FAI+DEAYPYI++RL+TDDSPRLR ALRYM+YG+ FD ERLIDLL+ALE F+A GD G++++ T X ++ RE LRF F ++GE FREF+L+E+V D R+A +EL VGL P+ L+A+ P+LSD D+++V KL+ FL G+ G +LG+ +T R L+P++RE ++DFG ++ RLTEK R + + S R+
Sbjct: 50 ETXAMVNDVRKQLNENEDARMVMDALRGKNLNDDDTALDGLQMRLVDIGAASTDPDTG----LPYEYDPAALQSFFKKRPLTIVQRLFQLASVGGGLAVKLALDALLGRIKDNPELEIQRAGELRDTITSLGPFYIKIGQALSIRPDVLSPRSMVELQKLCDKVPSYDSKVAFATIEDELGKSVDEIFSEITPEPVAAASLGQVYKATLRSTGETVAVKVQRPAVLETVSLDLFLAREIGLIARNFPQLTDRLDAVALLDEFAFRFYQELDYNLECENGLRIAEDMSVLPMVVIPKNYPEFTSRRVHVAEWIEGEKLSQSKADDVGALVNLGVITYMTQLLDKGFFHADPHPGNMLRTTDGKLAILDFGLMTEITDNQKYGMVEAIAHLINRDYTEIGQDFINLDFIPEGTDTSPIVPALTTVFDVALAGGGAKSINFQELAADLAVITYEFPFRIPPYFALVIRAISVLEGIALVGNPEFAIIDEAYPYIARRLMTDDSPRLRAALRYMVYGREGEFDAERLIDLLEALEKFKAIRDDGDGTAYKVDGVRGNKVVGSAGDFVGSQVVDTSERDTDIDGGRFRVSNNXXXXVGGSNLQDQTEEDQETVREGLRFFFSEEGEPFREFMLEEIVTVVDASSREATQELIRRVGLSNLPTPSFLRALNPELSDNDKRMVQQITKLVQFLGGDYDGAIGGGNNN----------------------NLGNGGNATTARLRALIPIVREYRVPLQDFGKLLIARLTEKNLQRGINWASQRL 799
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Match: A0A1Z5JTA5_FISSO (AarF domain-containing kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JTA5_FISSO) HSP 1 Score: 736 bits (1900), Expect = 4.930e-251 Identity = 416/790 (52.66%), Postives = 520/790 (65.82%), Query Frame = 1
Query: 445 TVREMSAQMSQMRKDLEENEEAQAYMQALRGAGIRD--YAAAEGEMRLLEIEEGEAEGAGGEADRLPMVYDPQALKEYFARRPQVATRRTLQLAGAFSGFVAGYLLD--LARGKVKEN-EIARAIQLRDIITSLGPFYIKLGQALSIRPDILSPGAMVELQRLCDKVPSFDSTIAFLTMEIEYGRPVEEIFVDITPEPLAAASLGQVYKATLRSNGKPVAVKVQRPGVLETVSLDLHLARELGYQMKKIPFLAERTDLVALLDEFASRFFDELDYVKECASGVVIREQMQHIKQVVVPYNYPEFTTRRVFVSEWIDGEKLSQSKADDVQDLVNVGVTAYLTQLLDTGFFHADPHPGNLIRTPEGKLAILDFGLMTQITDNQKFGMIEAISHLVHRDYEGIGDDFKRLDFIPEEVDVTPIIPALTNVFNMALAGGGAKSINFQALASDLAQITFDYPFRIPPYFALIIRAIGVLEGIALVGNPGFAIVDEAYPYISKRLLTDDSPRLREALRYMIYGKSNVFDVERLIDLLQALESFQA-----------------------KGDTTGAELL-------------------ATQPPQXXXXXXXXXXXXXXGSLTSPND--AREALRFLFGKDGEFFREFLLDEVVKGADCLGRDAARELAFTVGLRGSN--VPNLLKAVTPKLSDEDRKVVDNTNKLLAFLLGNLQDESKGKQRQTPVNPAQGLFGLRVATPPFNLLDLGSSPRSTALREELVPVLRELGPEMRDFGLQVVGRLTEKLATRVLRYTSGRV 2661
TVR+ S+ M +MR++L +NE+A MQALRG + D A A EMRL++I A + D LP YDPQALK +F+ RP R LQL +GF+ L D L RGK N E+ RA +LR++ITSLGPF+IK+GQALSIRPDILSP +MVELQ+LCDKVPSFDS IAF T+E E GRPVEEIF ITPEP+AAASLGQVYKATLR G+ VAVKVQRP VLETVSLDL+LARELG +++ L++R D VALLDEFA RF+ ELDY EC +G I +M + VV+P NYP++T+RRV V+EWI+GEKLSQSKADDV LVN+GV YLTQLLD+GFFHADPHPGN++RT +G+LAILDFGLMT++T++QK+GMIEAI HL++RDY IG DF LDFIP+ D PI+PALT VF++ALAGGGAKSINFQ LA+DLA+ITF+YPFRIPPYFAL+IRAI VLEGIALVGNP FAI+DEAYPYI++RL+TD SPRLR LRYMIYG+ FD E LIDLLQALE F A GD G++ + A P S T + R AL F FG +G+ REF+L+E+V D GR+A +EL T+G VP+ ++A+ P+LS+ D+++V KL+ FLLG D + S LR+ L+PV+RE P++R+FGL + RLTE+ +R + + S ++
Sbjct: 21 TVRDTSSLMQEMRRELAKNEDANLMMQALRGQNLNDDDTAVAGLEMRLVDI-------APRDDDSLPFDYDPQALKVFFSSRPTAVVTRVLQLITVSAGFLVNVLGDQLLQRGKTNANLEVQRAAELRELITSLGPFFIKIGQALSIRPDILSPRSMVELQKLCDKVPSFDSKIAFATIERELGRPVEEIFSKITPEPVAAASLGQVYKATLRETGETVAVKVQRPAVLETVSLDLYLARELGMIARRLN-LSDRLDAVALLDEFAYRFYQELDYNLECQNGERIAREMAVLPMVVIPKNYPKYTSRRVHVAEWIEGEKLSQSKADDVGALVNLGVITYLTQLLDSGFFHADPHPGNMMRTNDGRLAILDFGLMTEVTEDQKYGMIEAIVHLINRDYSEIGQDFINLDFIPKGTDTRPIVPALTKVFDVALAGGGAKSINFQDLAADLAEITFEYPFRIPPYFALVIRAISVLEGIALVGNPNFAIIDEAYPYIARRLMTDPSPRLRATLRYMIYGRDGNFDAENLIDLLQALEKFTAVRDDGDGSAFKVNGVRGMKVVGSAGDFVGSQQVDISERDTDVDGGRFRVSGTAASPVTGSQNGSLATASSETVSSTMNDQETVRGALSFFFGNEGDVLREFMLEEIVTVVDASGRNALQELGRTLGFNRLPIPVPSFIRAINPELSENDKRMVQQIGKLIEFLLG----------------------------------DFEGAATSARLRK-LIPVVREYAPQLREFGLLLAARLTERSLSRGMNWASSQL 767 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig1.12.1 >prot_C-linearis_contig1.12.1 ID=prot_C-linearis_contig1.12.1|Name=mRNA_C-linearis_contig1.12.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=914bp MDSRRQSKSPASHGQGSRSRRRRSRASATSSSSAAAAAAAIVLSLAGPAHback to top mRNA from alignment at C-linearis_contig1:306971..318636- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig1.12.1 ID=mRNA_C-linearis_contig1.12.1|Name=mRNA_C-linearis_contig1.12.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11666bp|location=Sequence derived from alignment at C-linearis_contig1:306971..318636- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig1:306971..318636- >mRNA_C-linearis_contig1.12.1 ID=mRNA_C-linearis_contig1.12.1|Name=mRNA_C-linearis_contig1.12.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=5484bp|location=Sequence derived from alignment at C-linearis_contig1:306971..318636- (Chordaria linearis ClinC8C monoicous)back to top |