mRNA_C-linearis_contig1.115.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig1.115.1
Unique NamemRNA_C-linearis_contig1.115.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: D7FJ00_ECTSI (Suppressor of lin-12-like protein-related / sel-1 protein-related n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ00_ECTSI)

HSP 1 Score: 651 bits (1680), Expect = 5.830e-224
Identity = 350/545 (64.22%), Postives = 396/545 (72.66%), Query Frame = 2
Query:    2 SLVAMIRLWQETLSPDQIEAVFRASKPLFFGEASDTLASRYPSIHAVESMWTR-EHPKIYVSLLLAGREQLDGEAASSCGREKEAEARATAVAQWTTGGARVAVEQLELAVEAGSHRGAYTLAQLLLTGLGGTAAQGTSSVG--THDEEALTMYPRERNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAASWGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALKGQMVSFLAIGDAFFYGKAGLPR 1627
            SLV+++RLW+  LSPDQ++AVF+ASKPLF  EAS  LASRY SIHA+ SM +R +    Y SLLL GREQLDGE A+ CGRE E EARATAVAQW  GGARV V+QLELAV  GS R AY LA  +L+GLGGTAA   S     T +E++     +    PTTSR +ALLHFAAVGG+ EAQLALGLRYL+GNGVQLDLETAA++LAC  + AH EY  VGKQPILEMQRLT ANEAVVE+GQKGEDDD +QYQI RAEQGD+PSIEA+GDLYYWGARGV RDQ+RALQYF+ A  AGSNNARCAAAGMYLKGEGT+ NHT                                          ERA+NM+Q+ DSLFN AHCLA G+GTDQDLERAAEL+RL A WGHVD                   A  A YL++VA  GPWG+RLRLAFDCYLQGDMLSAL +Y++ AELGYEVAASN AFLLD GK+  DG  FQGG S PVWSETMAVRLH++AA KG   SFLAIGDAFFYG+AGLPR
Sbjct:  354 SLVSLVRLWKGALSPDQVDAVFQASKPLFLREASTALASRYSSIHAIVSMTSRMQTTSTYASLLLTGREQLDGENAARCGRETELEARATAVAQWNDGGARVVVDQLELAVLGGSFRAAYMLATTMLSGLGGTAAHDRSIAANTTREEDSDRGSLKRWKVPTTSRAIALLHFAAVGGYFEAQLALGLRYLQGNGVQLDLETAAYYLACVCDKAHAEYHLVGKQPILEMQRLTAANEAVVEVGQKGEDDDALQYQIHRAEQGDVPSIEAMGDLYYWGARGVTRDQSRALQYFNRASDAGSNNARCAAAGMYLKGEGTKVNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERASNMKQEADSLFNTAHCLAHGIGTDQDLERAAELFRLGAGWGHVDCAYELGYMYAQGIGVERDPALTAKYLAVVAQAGPWGRRLRLAFDCYLQGDMLSALTMYSEAAELGYEVAASNAAFLLDEGKLRLDGELFQGGRSAPVWSETMAVRLHIMAATKGYAPSFLAIGDAFFYGRAGLPR 898          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S2WD54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD54_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.520e-73
Identity = 161/425 (37.88%), Postives = 223/425 (52.47%), Query Frame = 2
Query:  461 ERNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKI-----IFDGGGFQG-------------------------------GVSEPVWSET---MAVRLHVLAALKGQMVSFLAIGDAFFYG 1609
            E  +  T   + LLH AA    +EA L+L  RY  G G++   + AA++   AA VAH ++   G QP  EM RL+ ANE  +  G++GEDD+ +Q+ + +AE GD+ ++  L D  YWG RG  RDQ RA + +  A  AG+  A+ AAAGMYL+GEG                     RALNGLGY YF G  LP++L KA+GYF+ AA ++QDGDSLFNA HCLA GLGT++D++RA +++  A+  +GH D+                  +   A  YL   A  G WG R+R  FD +L G+ L+AL LY + AELGYE+A SN A++LD   +     + D     G                               G +    S+T    A+  H  AA +    S+LA+GDA+FYG
Sbjct:  105 EAGSSATPTGIGLLHAAAALDDTEAMLSLAHRYKHGLGLEQSDDAAAWYYRAAAAVAHDDFHIAGLQPSHEMNRLSEANEESLGEGERGEDDEQLQFLVAQAEHGDVGAMVTLADHLYWGHRGFARDQVRARELWDRAADAGNAAAQAAAAGMYLRGEGGXXXXXXXXXXXXXXXXXXXXRALNGLGYAYFFGTHLPKDLPKAFGYFQEAARLEQDGDSLFNAGHCLANGLGTERDMQRAVDMFDKASLRFGHFDAIYEMGGLHLHGRIPGQQRSVHEAMRYLIPAAHGGQWGGRVREGFDAFLGGNPLTALLLYFEAAELGYEIAESNAAYILDRALVDAPALLLDAPASSGPMLSAPPGTGQDQDATEHRDQGMLPAVVANRGKTFASGSQTHRLWALHYHRRAAGQDNFESYLALGDAYFYG 529          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S3ZY42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY42_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.810e-73
Identity = 175/452 (38.72%), Postives = 234/452 (51.77%), Query Frame = 2
Query:  299 RVAVEQLELAVEAGSHRGAYTLAQLLLTGLGGTAAQGTSSVGTHDEEALTMYPRERNAP---TTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLT--TANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAAS-WGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVGPWGKR-LRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETM--AVRLHVLAA-LKGQMVSFLAIGDAFFYGKAGLP 1624
            R  V  LE AV  G    +  LA L L G   T  +   ++         +  R  +A     T R V LL+ AA+ G + A LAL  RY  G G     E AA++  CAA +A  E+   G+Q  +E+ R+T  T  +  V+  Q+G++D  +Q Q+QRAE+GD+ +  A GDL YWGARG  RD  RA ++F  A  A   +ARC  A M L+GEG   +H +AV  YE+AA     +ALNGLGY YF G  LP+N TKAYGYF  AA +  DGDS FNAAHCLA G+G +++++ AA LY  AA+  GH D+                     A           W  R +R  FD YL+GD   AL  YA+ AE G +VAA+N A+LLD    +             +   TM  A+R H LA+ L G    + A+GDA  +G   +P
Sbjct:  566 RKGVSYLERAVAMGDAAASRMLASLTLAGFVSTETKDLKAIAPPHTMGPVVASRLGDAVHTNNTERAVQLLYQAAMHGDARACLALSNRYRFGRGTSQSQEAAAWYAKCAAAIAKEEFHTPGEQTFVELNRITDETVADGSVDDNQRGDEDAQLQAQMQRAEEGDIDACVASGDLLYWGARGFQRDHVRARRFFKVAADADHAHARCLYASMLLRGEGGDTDHAEAVRQYEVAASAGSAKALNGLGYEYFYGNHLPKNSTKAYGYFAEAARLDADGDSNFNAAHCLAHGIGVEKNVKEAARLYERAATRHGHFDAAFEIALVKHGGSGRTGRDVNRAREFFEACARAGWAARDVRAGFDAYLRGDAGRALLWYAEAAETGTDVAAANAAWLLDRDSDV-----------RALVGNTMPLAIRFHRLASTLDGGGDGYAALGDAVLHGALVVP 1006          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A329S703_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S703_9STRA)

HSP 1 Score: 260 bits (664), Expect = 3.100e-72
Identity = 159/393 (40.46%), Postives = 225/393 (57.25%), Query Frame = 2
Query:  464 RNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
            +N    S    LLHFAA  G  +A   LG RY   +    D+E A +    AA  A   Y ++GKQP+ EM RL  + E  + +G++G+DD+LIQ+Q  RA+ GD+ ++ A+GDLYYWGA GVPRD T+A  YF+ A  AG+ N++ A AGM LKGEGT  ++  A++ YE A+E++H RALNGLG+++F G   +P N T A  YFERAA  ++DGDS+FNA +C A GLGT  ++ RA E Y +AA  +GH D+                   +  A  YL   +  G WG+ +R  FD Y  G+   A+  Y +  ELGY VA SN AF+ D  +++  G          + +E  A +  +LA  + G   + + IGD  +YG AGL +
Sbjct:  661 QNGQLDSLTTGLLHFAAATGEKDAFAMLGRRYRASHAS--DVEIATYHYYHAAVEAASVYHQLGKQPLHEMTRLYDSFERDITVGERGDDDELIQFQKLRADNGDVEAMAAMGDLYYWGAHGVPRDHTQAYNYFNRAAQAGNVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKASEKNHTRALNGLGFIHFHGSGGVPGNKTLALEYFERAAANKEDGDSIFNAGYCHAMGLGTSVNVSRAMEFYDMAAREFGHFDAIFEMGKILMIGVPGVVSRNSERALEYLKAASDGGQWGRVVRKGFDLYTDGEFERAVVAYHEARELGYPVATSNLAFVYDQ-RLLQPGN---------LANERRAHKYLLLANNENGDRETLVRIGDYHYYGLAGLRK 1041          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A6A4AAV4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4AAV4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 8.190e-72
Identity = 160/386 (41.45%), Postives = 223/386 (57.77%), Query Frame = 2
Query:  497 LLHFAAVGGHSEAQLALGLRY---LEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAE-QGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
            LLHFAA  G  +A   LG RY   +E +   L +    +F A     A  E+ ++GKQP+ EM RL  + E  V +G++G+DD+LIQ+Q  RA+ +GD+ ++ A+GDLYYWGA G+PRD  +A  YF+ A  AG  N++ A AGM LKGEGT  ++  A++ YE AAE++H RALNGLG+++F G   +P+N + A  YFERAA  Q+DGDS+FNA +C A GLGT+ ++ RA E Y +AA  +GH D+                   T  A  YL   +  G WG+ +R  FD Y  G    A   Y +  ELGY VA SN AFL D  +++  G          V SE  A++   LA+ + G   + + IGD  +YG AGL +
Sbjct:  414 LLHFAAARGEKDAFAILGRRYHQNIERSNHGLGIAVYHYFHAAVEAAA--EFHQLGKQPLHEMTRLYDSFERDVTVGERGDDDELIQFQKMRADKEGDVGAMAAMGDLYYWGAHGIPRDHAQAYSYFNRAAQAGDVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKAAEKNHTRALNGLGFIHFHGSGGVPENKSFALEYFERAAENQEDGDSVFNAGYCHAMGLGTNVNVSRAMEFYDVAARKFGHFDAIFEMGKILMKGVQGVVPRDTKKALQYLKAASDGGQWGRAVRRGFDLYTNGQFDRAAVSYHEARELGYPVATSNLAFLYDQ-RLLRSG---------DVASERRALKYLSLASEENGDRETLVRIGDYHYYGLAGLRK 787          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A6A3M689_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M689_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.580e-71
Identity = 160/386 (41.45%), Postives = 223/386 (57.77%), Query Frame = 2
Query:  497 LLHFAAVGGHSEAQLALGLRY---LEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAE-QGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
            LLHFAA  G  +A   LG RY   +E +   L +    +F A     A  E+ ++GKQP+ EM RL  + E  V +G++G+DD+LIQ+Q  RA+ +GD+ ++ A+GDLYYWGA G+PRD  +A  YF+ A  AG  N++ A AGM LKGEGT  ++  A++ YE AAE++H RALNGLG+++F G   +P+N + A  YFERAA  Q+DGDS+FNA +C A GLGT+ ++ RA E Y +AA  +GH D+                   T  A  YL   +  G WG+ +R  FD Y  G    A   Y +  ELGY VA SN AFL D  +++  G          V SE  A++   LA+ + G   + + IGD  +YG AGL +
Sbjct:  678 LLHFAAARGEKDAFAILGRRYHQNIERSNHGLGIAVYHYFHAAVEAAA--EFHQLGKQPLHEMTRLYDSFERDVTVGERGDDDELIQFQKMRADKEGDVGAMAAMGDLYYWGAHGIPRDHAQAYSYFNRAAQAGDVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKAAEKNHTRALNGLGFIHFHGSGGVPENKSFALEYFERAAENQEDGDSVFNAGYCHAMGLGTNVNVSRAMEFYDVAARKFGHFDAIFEMGKILMKGVQGVVPRDTKKALQYLKAASDGGQWGRAVRRGFDLYTNGQFDRAAVSYHEARELGYPVATSNLAFLYDQ-RLLRSG---------DVASERRALKYLSLASEENGDRETLVRIGDYHYYGLAGLRK 1051          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S1C3J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3J9_9STRA)

HSP 1 Score: 248 bits (633), Expect = 9.200e-68
Identity = 172/383 (44.91%), Postives = 218/383 (56.92%), Query Frame = 2
Query:  491 VALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDH--VRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAASWGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVG-PWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAAL-KGQMVSFLAIGDAFFYGKAGLPR 1627
            +AL H AA+ G +EA L LG  Y  G GV   +ET+A++   A + A+ ++  VG QP+ EM+RLT  NE  V  GQ+G DD+ IQYQ+ +AEQG +PS  A+GDLYYWGA GVPRDQ RA +YF  A  AG+  A+ A   MYLKGEG  AN+  AV  Y  A++ D   VRALNGLG+ Y+ G  + QNLTKA+ YF RAA  QQDGDS FNA  CLA                           XXXXXXXXXXXXXXXXXX          A++G  WG  +R  F+ YL GD   A   Y +  ++GYE  A+N  +LLD GK  +      G        +  A R+    +L +G + S L +GD  +YG  GL R
Sbjct:  870 LALFHLAAMAGSTEAALVLGHAYYRGRGVPACMETSAWYYLAAVDEAYDQFHAVGSQPLNEMERLTEDNEDSVADGQRGVDDEQIQYQMMQAEQGHVPSQLAMGDLYYWGAHGVPRDQARAFEYFQQAADAGNPTAQVAVGNMYLKGEGVPANNVSAVAWYTKASKHDPPPVRALNGLGFAYYYGRGVEQNLTKAFEYFSRAAAEQQDGDSSFNAGMCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPASLGGSWGGDVREGFELYLHGDHDGAALKYLRAMQMGYETGAANVGYLLDRGKASYRA--LVGAPERCAHCQLNAARMAYETSLAEGGLSSALKLGDYHYYGLGGLRR 1250          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: W2PQ44_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PQ44_PHYPN)

HSP 1 Score: 244 bits (622), Expect = 1.490e-66
Identity = 151/382 (39.53%), Postives = 213/382 (55.76%), Query Frame = 2
Query:  497 LLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
            L+HFAA  G  +A   LG RY        D+E AA+    AA  A   + ++GKQP+ EM RL  + E  + +G++G+DD+LIQ+Q  RA+ GD+ ++ A+GDLYYWGA GVPRD T+A  YF+ A  AG+ NA+ A AGM LKGEGT  ++  A+              LNGLG+++F G   +P+N T A  YFERAA  ++DGDS+FNA +C A+GLGT  ++ RA E Y +AA  +GH D+                   +  A  YL      G WG+ +R  FD Y  G+   A+  Y +  ELGY VA SN AFL D  +++  G          + SE  A++  +LA  + G   + + IGD  +YG AG+ +
Sbjct:  668 LIHFAAASGEKDAFAMLGRRYRAS-----DVEIAAYHYYHAAVEAANAFHQLGKQPLHEMTRLFDSFERDITVGERGDDDELIQFQKVRADNGDVEAMAAMGDLYYWGAHGVPRDHTQAYNYFNRAAQAGNVNAQSAVAGMLLKGEGTAQDNVTAIXXXXXXXXXXXXXXLNGLGFIHFHGSGGVPENKTLALEYFERAALNKEDGDSIFNAGYCHAKGLGTSVNVSRAMEFYDMAAREFGHFDAIFEMGKILMLGVSGVVPRNSERAVEYLKAACDGGQWGRVVRKGFDLYTNGEYERAVVAYHEARELGYPVATSNLAFLYDQ-RLLQLGN---------IASERRALKYLLLANTENGDRETLVRIGDYHYYGLAGMRK 1034          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A024TVY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVY4_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.940e-66
Identity = 157/388 (40.46%), Postives = 208/388 (53.61%), Query Frame = 2
Query:  476 TTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQG-DLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXATAA-TYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALKGQMVSFLAIGDAFFYGKAGLPR 1627
            T    +AL H+AA  G + + + L  RY +G+GV+ D ETAA +   AA  A R Y   G QP+ EM  L  A++  V  GQ+GE+D  IQ+Q  RA+   D+ ++ A+GDLYYWGARG  RD   A +YF  A   GS     AAAGM LKGEG   ++  A+  YE AA  ++VRALNGLGY++F G A   QN +K   +FE AA  + DGDSLFNA +C   GLGT  +  RA   +R AA S+GH DS                   + A TYL  V+  G WGK  R  FD YL G    A+ LY +  E GY VAA N A+L D+             +  P  +  +A    V A+L+        +GD ++YGK G+ +
Sbjct:  565 TLGEAIALFHYAASMGDASSNMILARRYEKGDGVEADGETAAHYYYIAAVDASRAYHTRGNQPLHEMNSLFHADQVNVAEGQEGENDKWIQFQKMRADHDQDVDAMVAMGDLYYWGARGCARDHPLAFEYFERAATLGSPIGMSAAAGMLLKGEGVAQDNETAIRWYEQAAMSNNVRALNGLGYIHFYGTANCTQNQSKGLEFFEHAAAQRTDGDSLFNAGYCHFVGLGTPANTTRALAYFRDAAHSFGHFDSIFELGKVALNVDGTFERHVSEAITYLRAVSAAGDWGKVARQGFDAYLSGQHHQAIWLYHEAREYGYPVAAGNLAYLYDA-------------MGLPNSATYLAEATEVEASLR--------LGDCYYYGKCGVGQ 931          
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A225WH48_9STRA (Suppressor of lin-12 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WH48_9STRA)

HSP 1 Score: 243 bits (621), Expect = 2.220e-66
Identity = 146/381 (38.32%), Postives = 220/381 (57.74%), Query Frame = 2
Query:  500 LHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
            +HFAA  G  +A   LG RY       +++ T  ++ A  A  + +++ ++GKQP+ EM RL  + E  V  G++G+DD+LIQ+Q  RA++GD+ ++ A+GDLYYWGA G+ RD  +A  YF  A  AGS N++ A AGM LKGEGT  ++  A++ YE A+E+++ RALNGLG+++F G   +P+N + A  +FE AA  ++DGDS+FNA +C A GLGT+ ++ RA E Y +AA  +GH D+                   +  A  YL   +  G WG  +R  FD Y  G+   A  LY +  ELGY VA SN AFL D  +++  G          + SE  A++  ++   + G   + + IGD  +YG AG+ +
Sbjct:  697 IHFAAASGEKDAFAMLGRRYHALGHSAVEIATYHYYQA--AVQSSKDFHQLGKQPLHEMTRLYDSFERDVTAGERGDDDELIQFQKLRADKGDVDAMAAMGDLYYWGAHGISRDHAQAYNYFHRAAQAGSVNSQAAVAGMLLKGEGTAQDNVTAIKWYERASEKNNTRALNGLGFIHFHGSGGVPENKSLALEFFELAAGNEEDGDSIFNAGYCHAIGLGTNVNISRAMEYYDVAARKFGHFDAIFEMGKILMNGVPGVVSRNSGRALDYLKAASDGGQWGSTVRKGFDLYTDGEFDRAAVLYHEALELGYPVAISNLAFLYDQ-RLLQPG---------DIMSERRALKYLLMTNKENGDRETLVRIGDYHYYGLAGIRK 1065          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ00_ECTSI5.830e-22464.22Suppressor of lin-12-like protein-related / sel-1 ... [more]
A0A7S2WD54_9STRA1.520e-7337.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3ZY42_9STRA1.810e-7338.72Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A329S703_9STRA3.100e-7240.46Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A6A4AAV4_9STRA8.190e-7241.45Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A6A3M689_9STRA7.580e-7141.45Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A7S1C3J9_9STRA9.200e-6844.91Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
W2PQ44_PHYPN1.490e-6639.53Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A024TVY4_9STRA1.940e-6640.46Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A225WH48_9STRA2.220e-6638.32Suppressor of lin-12 n=1 Tax=Phytophthora megakary... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig1contigC-linearis_contig1:1634640..1638797 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score653.7
Seed ortholog evalue7.6e-185
Seed eggNOG ortholog2880.D7FJ00
KEGG koko:K14026
KEGG Pathwayko04141,map04141
KEGG ModuleM00403
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ERAD pathway
EggNOG OGsCOG0790@1,KOG1550@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Exons10
Model size1630
Cds size1617
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927277.774699-UTR-C-linearis_contig1:1634639..16346521622927277.774699-UTR-C-linearis_contig1:1634639..1634652Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1634640..1634652 +
1690879600.3421292-UTR-C-linearis_contig1:1634639..16346521690879600.3421292-UTR-C-linearis_contig1:1634639..1634652Chordaria linearis ClinC8C monoicousUTRC-linearis_contig1 1634640..1634652 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927277.7846606-CDS-C-linearis_contig1:1634652..16348131622927277.7846606-CDS-C-linearis_contig1:1634652..1634813Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1634653..1634813 +
1690879600.356109-CDS-C-linearis_contig1:1634652..16348131690879600.356109-CDS-C-linearis_contig1:1634652..1634813Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1634653..1634813 +
1622927277.798501-CDS-C-linearis_contig1:1635407..16357021622927277.798501-CDS-C-linearis_contig1:1635407..1635702Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1635408..1635702 +
1690879600.3652823-CDS-C-linearis_contig1:1635407..16357021690879600.3652823-CDS-C-linearis_contig1:1635407..1635702Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1635408..1635702 +
1622927277.8085775-CDS-C-linearis_contig1:1635935..16360211622927277.8085775-CDS-C-linearis_contig1:1635935..1636021Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1635936..1636021 +
1690879600.377427-CDS-C-linearis_contig1:1635935..16360211690879600.377427-CDS-C-linearis_contig1:1635935..1636021Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1635936..1636021 +
1622927277.819321-CDS-C-linearis_contig1:1636194..16365521622927277.819321-CDS-C-linearis_contig1:1636194..1636552Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1636195..1636552 +
1690879600.389806-CDS-C-linearis_contig1:1636194..16365521690879600.389806-CDS-C-linearis_contig1:1636194..1636552Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1636195..1636552 +
1622927277.8316333-CDS-C-linearis_contig1:1636771..16369181622927277.8316333-CDS-C-linearis_contig1:1636771..1636918Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1636772..1636918 +
1690879600.4011052-CDS-C-linearis_contig1:1636771..16369181690879600.4011052-CDS-C-linearis_contig1:1636771..1636918Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1636772..1636918 +
1622927277.841638-CDS-C-linearis_contig1:1637223..16373391622927277.841638-CDS-C-linearis_contig1:1637223..1637339Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637224..1637339 +
1690879600.4159622-CDS-C-linearis_contig1:1637223..16373391690879600.4159622-CDS-C-linearis_contig1:1637223..1637339Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637224..1637339 +
1622927277.8548732-CDS-C-linearis_contig1:1637537..16376761622927277.8548732-CDS-C-linearis_contig1:1637537..1637676Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637538..1637676 +
1690879600.4280097-CDS-C-linearis_contig1:1637537..16376761690879600.4280097-CDS-C-linearis_contig1:1637537..1637676Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637538..1637676 +
1622927277.866275-CDS-C-linearis_contig1:1637897..16379841622927277.866275-CDS-C-linearis_contig1:1637897..1637984Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637898..1637984 +
1690879600.4380243-CDS-C-linearis_contig1:1637897..16379841690879600.4380243-CDS-C-linearis_contig1:1637897..1637984Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1637898..1637984 +
1622927277.8747945-CDS-C-linearis_contig1:1638342..16384331622927277.8747945-CDS-C-linearis_contig1:1638342..1638433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1638343..1638433 +
1690879600.4465668-CDS-C-linearis_contig1:1638342..16384331690879600.4465668-CDS-C-linearis_contig1:1638342..1638433Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1638343..1638433 +
1622927277.8835738-CDS-C-linearis_contig1:1638660..16387971622927277.8835738-CDS-C-linearis_contig1:1638660..1638797Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1638661..1638797 +
1690879600.4545217-CDS-C-linearis_contig1:1638660..16387971690879600.4545217-CDS-C-linearis_contig1:1638660..1638797Chordaria linearis ClinC8C monoicousCDSC-linearis_contig1 1638661..1638797 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig1.115.1prot_C-linearis_contig1.115.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig1 1634653..1638797 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig1.115.1

>prot_C-linearis_contig1.115.1 ID=prot_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=539bp
MIRLWQETLSPDQIEAVFRASKPLFFGEASDTLASRYPSIHAVESMWTRE
HPKIYVSLLLAGREQLDGEAASSCGREKEAEARATAVAQWTTGGARVAVE
QLELAVEAGSHRGAYTLAQLLLTGLGGTAAQGTSSVGTHDEEALTMYPRE
RNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLA
CAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQR
AEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAA
GMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLT
KAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAASWG
HVDSAYELAHLYAQGTGVERNPATAATYLSMVATVGPWGKRLRLAFDCYL
QGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPV
WSETMAVRLHVLAALKGQMVSFLAIGDAFFYGKAGLPR*
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mRNA from alignment at C-linearis_contig1:1634640..1638797+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig1.115.1 ID=mRNA_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4158bp|location=Sequence derived from alignment at C-linearis_contig1:1634640..1638797+ (Chordaria linearis ClinC8C monoicous)
GTCCCTAGTTGCTATGATACGGCTATGGCAGGAGACATTATCTCCTGATC AGATCGAAGCTGTGTTCCGGGCGTCAAAGCCTCTATTTTTCGGGGAAGCG TCCGATACCTTGGCCTCGCGCTATCCTTCCATCCATGCTGTTGAGTCGAT GTGGACGAGGGAACATCCAAAAATGTACGTACAAACAGAGAGCTAAAACG TTCAGTTTTCTTGCTCAGCAAAACGCGCGCTCGAAGCAAACCCCGAATTA TGCAGTCGGCACGCTCCATGACACATCGTATAACCCCAACCACTGTTATG CGCTCGAAGAAGCACTGCGTAACGTCCTACCGGGGGGTACAAAACACATC CTCGGCAGGATTGGGAGGGAGGCTGGTCTTCCCGCGGAGGATAAAGAGTG GCGTGAGTCAGACGCATCTCAGCAAGAGCTCGGACGCGCTGCCTACGAGG CAGCAATGGCGGCGACGGCTCTTTGCAAGAGCTTCCGGGAGCGGTTGGAC ATGTACCAACTTGCAGCTGACGCTGGGCATGCCGAGGCCCGAGTAAGGTA TTGGGACAGCACCAGAAAAATATTCTGTCGTAAATAGCAGCCTGCAAACC TTGAATACTCCTTGTTTGGTTGGCCGCCCGCTTGGCATGACCCTCGTAAA AACATCGTTGATTCTCTTTTTTGTAGAGAAACGCCCGCGAGACAAAATAC TTCAAAAGAAGTACATATGTTGAAACGCTGCTATTGTTTTGGGGGCGTTT TCTCATCCCCCAAAACAGCTACGTTTCGTTGCTTCTGGCTGGACGAGAGC AGCTCGACGGGGAAGCAGCTTCATCGTGCGGACGAGAAAAGGAAGCGGAA GCGCGAGCGACGGCGGTGGCACAGTGGACTACCGGTGGGGCAAGAGTCGC TGTGGAGCAGCTCGAGCTGGCAGTGGAAGCGGGATCCCATCGAGGAGCAT ATACGTTGGCACAGCTACTACTAACGGGTCTTGGTGGTACTGCAGCACAA GGCACATCCTCAGTAGGTACGCACGACGAAGAAGCTTTGACTATGTACCC AAGAGAGAGAAACGTTGAAGATCATATTTCATGCCGCATGCTGTGTACAA TAGCGCCCGGACAAACTACGGTCTTGCCAGCGTTTGAGAACGTTGTGGTA AGTTCGGCATCGAAAGAGTTGCAAGGCTAAAGACAACGTCTTTTTCTATG ACAGATTGCGCAAGTCGGTGCCGAGTCTCTCCAACACTCCGGCAGCTCCC TTTTGCTGGGGCGGTTCGAGACCAATGGGCGAACACAACGTGCGAGGCGC CAACCACGTCGAGAGTGGTTGCCCTACTCCACTTTGCCGCAGTCGGTGGT CACTCAGAGGCCCAGCTAGCCTTAGGTCTAAGGTGAGGTCTGCCGTGGTT GTCTGTACCCTGCTGCATCCGATGAACAAAGACTTCTGGCAGGCCACTAG CCAGAAAATGCTTGCCTACTTCGACGGAAAATTCCCCCCGTTTAAACACA GGGGCTTTGGTGCTCGCGAGTCTTTTACGCTTCGATGCCGTGTCGCTATT TGTAGGTATCTCGAAGGCAATGGGGTACAGCTTGATCTGGAAACGGCCGC CTTTTTCCTCGCGTGTGCTGCGGAGGTAGCCCACCGTGAGTACCGCAAAG TCGGCAAACAACCGATTCTTGAGATGCAGCGTCTGACTACGGCAAACGAG GCAGTTGTGGAGATTGGTCAAAAAGGGGAGGACGACGACCTCATCCAGTA CCAGATTCAACGAGCGGAGCAGGGTGACCTCCCGAGCATCGAGGCCTTGG GAGATCTATACTACTGGGGGGCGCGAGGGGTTCCGCGCGACCAGACTCGA GCGCTACAATACTTTTCGTCAGCCTTATTCGCCGGCAGCAACAACGCTCG GTGTGCCGCAGCCGTGAGTGGATTGCTTGGTTCTTCCATGGAACGTGGAG TAGGGTTCTCGGATCGCCTGTCTACTCCGAGTATTTTATTTTGGGTGCTA TCCCCTGTTTCGGTGGACGTAAATCAAGCGTTGTAAAGCCAACGCTGATG TAACCACGCTTGCATTTGTATGCCGGCATCGAAACTCCAAGGTCGACGTC ACTTTCCCTATTCGTTATCAATGACGCACCAGGGAATGTACCTGAAGGGC GAGGGTACCCGTGCTAACCATACAAAGGCGGTGGAACTTTATGAGCTTGC TGCAGAGGAAGATCACGTGCGGGCTCTCAACGGACTGGGCTACGTTTATT TCACCGGGCTTGCACTTCCTCAAAACCTCGTGAGCCGTTGAAAGCATACA GGGTGTGTTCTCCAGGTTTGCCGTTTTGGATTCGACTTGGGTGGGGTTTA TGCCGACGCTAAATACGACCACCCATCGGGGGAAAGAAAGCACGCAAACA GTTGTTTCGTGAAAAGAGTTCGCGGGAGAAGGCCACCACGCGCGTACAGC AGTAGCAGCGTAACTAACGCGCCGGCTCTTCAGAGGCAGAACCTGCTCCT AAATTCCACCCAACAACTGTGTGCGTTGTACGGGCCAGGCAAATTGACGG TAGAACGTGTTCCGTTGCGTTTCTACCCCAGCAGACGAAAGCCTATGGGT ACTTCGAACGAGCGGCAAACATGCAGCAGGATGGCGACTCCCTTTTCAAT GCCGCCCACTGCCTCGCCCGCGGTTTAGGGACGGATCAGGACCTTGAACG GTGTGTTTACGGTGTGTCTACTCCGTACTAGGTACGCGAAACAGACCCGC GTTGAATACTTAAGAGTACTTCTGCATCGCTAGCGAAAACGCAGAGGGAG GGCGAACGTTTCACGGATCGCACAGTCGGCGACGGACCAACGAAGCACTT GTACGAACTTTTCATCAGTCTCCCTCGCACTATTGCGTTGACTCGCAGGG CGGCGGAACTCTACCGTCTAGCAGCTTCATGGGGCCACGTCGATAGCGCT TACGAATTGGCGCACCTGTATGCTCAGGGTACTGGGGTGGAGCGCAACCC CGCCACCGCAGCGACGTATCTGAGTATGGTCGCTACGGTGAGACTACATC GTCATATATATAATGAATTTCCTACAATGTAACGTAGAGTCTATTTGTCG CTGACTCCCCACGTGCGTGGCATGACCACGCGCGTTCTCGATTCAACTCC ACACTGTTTTGAGTCGACTCCCTTCGGGGGCTTCTACGCTGGTTGCAATC CTTACACGGTGCTGCACGATAAGTTGTTGATTCACGAACACGTCACGTGT AAAAACAGGTTGGCCCGTGGGGAAAACGGTTACGGCTGGCTTTCGATTGC TATCTCCAGGGTGATATGCTATCTGCTCTCGCGTTGTACGCACAGGTGAG ATGTGATTTGTGAACGCCCGCAAATCTTGATTCTGACCGAGTGGCTTTGC CCCGTGCTACATGACATGAAGTAAAAGCAAACGACCATCTTCGACAGCTC TAGGCGCCGGGTACCAACTACGCCGTTGTTGCTCTGTCTACTCCAAACAG ATTTTCGCGATCAATGAGGACGTAGACAGTGGCGGTGCCCCACACAGAAC ATGTGCTAGCGCAGATGGCAACTTGGACATAATTTTGAGCCCGAGAAGTT GCCTTTGAATCACAAAAAATTAGTTCCTCGCGGACAAGATTGAGAAGATA TCGTATGTAGATGATTCGCTAAAAAACACGACGCAATATATGATACAAAT CAGGTGGCCGAGCTGGGTTACGAGGTGGCCGCGAGCAATGGTGCTTTTCT GTTGGACAGCGGGAAAATTATTTTCGACGGTGGAGGTTTTCAAGGTAATT TAATGTGTCCGGCTGCGTGTGTCGTCAGGTAAATTAACGACCATCTGCTC AGTCACATGAAGTTATCAACGTTGAATCTGAGGGATGTTCGCTCGAGAGC CTCCCCTGTGACCGTGATGGACCACTTCCGCACCAAATCGCAACCCAACA CCGACATTCGTCTCATTATGTCACCCACATGCTCTGTGAACCATTTGTGG GCGGTGGTATTTGCGACGCAGGTGGGGTTTCTGAGCCAGTGTGGTCAGAA ACGATGGCAGTCCGCCTGCATGTGTTGGCAGCTCTGAAGGGGCAAATGGT GTCGTTTCTGGCTATCGGGGACGCCTTTTTCTATGGCAAAGCCGGGCTTC CAAGGTAG
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Coding sequence (CDS) from alignment at C-linearis_contig1:1634640..1638797+

>mRNA_C-linearis_contig1.115.1 ID=mRNA_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3234bp|location=Sequence derived from alignment at C-linearis_contig1:1634640..1638797+ (Chordaria linearis ClinC8C monoicous)
ATGATACGGCTATGGCAGGAGACATTATCTCCTGATCAGATCGAAGCTGT
GTTCCGGGCGTCAAAGCCTCTATTTTTCGGGGAAGCGTCCGATACCTTGG
CCTCGCGCTATCCTTCCATCCATGCTGTTGAGTCGATGTGGACGAGGGAA
CATCCAAAAATATGATACGGCTATGGCAGGAGACATTATCTCCTGATCAG
ATCGAAGCTGTGTTCCGGGCGTCAAAGCCTCTATTTTTCGGGGAAGCGTC
CGATACCTTGGCCTCGCGCTATCCTTCCATCCATGCTGTTGAGTCGATGT
GGACGAGGGAACATCCAAAAATCTACGTTTCGTTGCTTCTGGCTGGACGA
GAGCAGCTCGACGGGGAAGCAGCTTCATCGTGCGGACGAGAAAAGGAAGC
GGAAGCGCGAGCGACGGCGGTGGCACAGTGGACTACCGGTGGGGCAAGAG
TCGCTGTGGAGCAGCTCGAGCTGGCAGTGGAAGCGGGATCCCATCGAGGA
GCATATACGTTGGCACAGCTACTACTAACGGGTCTTGGTGGTACTGCAGC
ACAAGGCACATCCTCAGTAGGTACGCACGACGAAGAAGCTTTGACTATGT
ACCCAAGAGAGAGAAACCTACGTTTCGTTGCTTCTGGCTGGACGAGAGCA
GCTCGACGGGGAAGCAGCTTCATCGTGCGGACGAGAAAAGGAAGCGGAAG
CGCGAGCGACGGCGGTGGCACAGTGGACTACCGGTGGGGCAAGAGTCGCT
GTGGAGCAGCTCGAGCTGGCAGTGGAAGCGGGATCCCATCGAGGAGCATA
TACGTTGGCACAGCTACTACTAACGGGTCTTGGTGGTACTGCAGCACAAG
GCACATCCTCAGTAGGTACGCACGACGAAGAAGCTTTGACTATGTACCCA
AGAGAGAGAAACGCGCCAACCACGTCGAGAGTGGTTGCCCTACTCCACTT
TGCCGCAGTCGGTGGTCACTCAGAGGCCCAGCTAGCCTTAGGTCTAAGGC
GCCAACCACGTCGAGAGTGGTTGCCCTACTCCACTTTGCCGCAGTCGGTG
GTCACTCAGAGGCCCAGCTAGCCTTAGGTCTAAGGTATCTCGAAGGCAAT
GGGGTACAGCTTGATCTGGAAACGGCCGCCTTTTTCCTCGCGTGTGCTGC
GGAGGTAGCCCACCGTGAGTACCGCAAAGTCGGCAAACAACCGATTCTTG
AGATGCAGCGTCTGACTACGGCAAACGAGGCAGTTGTGGAGATTGGTCAA
AAAGGGGAGGACGACGACCTCATCCAGTACCAGATTCAACGAGCGGAGCA
GGGTGACCTCCCGAGCATCGAGGCCTTGGGAGATCTATACTACTGGGGGG
CGCGAGGGGTTCCGCGCGACCAGACTCGAGCGCTACAATACTTTTCGTCA
GCCTTATTCGCCGGCAGCAACAACGCTCGGTGTGCCGCAGCCGTATCTCG
AAGGCAATGGGGTACAGCTTGATCTGGAAACGGCCGCCTTTTTCCTCGCG
TGTGCTGCGGAGGTAGCCCACCGTGAGTACCGCAAAGTCGGCAAACAACC
GATTCTTGAGATGCAGCGTCTGACTACGGCAAACGAGGCAGTTGTGGAGA
TTGGTCAAAAAGGGGAGGACGACGACCTCATCCAGTACCAGATTCAACGA
GCGGAGCAGGGTGACCTCCCGAGCATCGAGGCCTTGGGAGATCTATACTA
CTGGGGGGCGCGAGGGGTTCCGCGCGACCAGACTCGAGCGCTACAATACT
TTTCGTCAGCCTTATTCGCCGGCAGCAACAACGCTCGGTGTGCCGCAGCC
GGAATGTACCTGAAGGGCGAGGGTACCCGTGCTAACCATACAAAGGCGGT
GGAACTTTATGAGCTTGCTGCAGAGGAAGATCACGTGCGGGCTCTCAACG
GACTGGGCTACGTTTATTTCACCGGGCTTGCACTTCCTCAAAACCTCGGA
ATGTACCTGAAGGGCGAGGGTACCCGTGCTAACCATACAAAGGCGGTGGA
ACTTTATGAGCTTGCTGCAGAGGAAGATCACGTGCGGGCTCTCAACGGAC
TGGGCTACGTTTATTTCACCGGGCTTGCACTTCCTCAAAACCTCACGAAA
GCCTATGGGTACTTCGAACGAGCGGCAAACATGCAGCAGGATGGCGACTC
CCTTTTCAATGCCGCCCACTGCCTCGCCCGCGGTTTAGGGACGGATCAGG
ACCTTGAACGACGAAAGCCTATGGGTACTTCGAACGAGCGGCAAACATGC
AGCAGGATGGCGACTCCCTTTTCAATGCCGCCCACTGCCTCGCCCGCGGT
TTAGGGACGGATCAGGACCTTGAACGGGCGGCGGAACTCTACCGTCTAGC
AGCTTCATGGGGCCACGTCGATAGCGCTTACGAATTGGCGCACCTGTATG
CTCAGGGTACTGGGGTGGAGCGCAACCCCGCCACCGCAGCGACGTATCTG
AGTATGGTCGCTACGGGCGGCGGAACTCTACCGTCTAGCAGCTTCATGGG
GCCACGTCGATAGCGCTTACGAATTGGCGCACCTGTATGCTCAGGGTACT
GGGGTGGAGCGCAACCCCGCCACCGCAGCGACGTATCTGAGTATGGTCGC
TACGGTTGGCCCGTGGGGAAAACGGTTACGGCTGGCTTTCGATTGCTATC
TCCAGGGTGATATGCTATCTGCTCTCGCGTTGTACGCACAGGTTGGCCCG
TGGGGAAAACGGTTACGGCTGGCTTTCGATTGCTATCTCCAGGGTGATAT
GCTATCTGCTCTCGCGTTGTACGCACAGGTGGCCGAGCTGGGTTACGAGG
TGGCCGCGAGCAATGGTGCTTTTCTGTTGGACAGCGGGAAAATTATTTTC
GACGGTGGAGGTTTTCAAGGTGGCCGAGCTGGGTTACGAGGTGGCCGCGA
GCAATGGTGCTTTTCTGTTGGACAGCGGGAAAATTATTTTCGACGGTGGA
GGTTTTCAAGGTGGGGTTTCTGAGCCAGTGTGGTCAGAAACGATGGCAGT
CCGCCTGCATGTGTTGGCAGCTCTGAAGGGGCAAATGGTGTCGTTTCTGG
CTATCGGGGACGCCTTTTTCTATGGCAAAGCCGGGCTTCCAAGGTAGGTG
GGGTTTCTGAGCCAGTGTGGTCAGAAACGATGGCAGTCCGCCTGCATGTG
TTGGCAGCTCTGAAGGGGCAAATGGTGTCGTTTCTGGCTATCGGGGACGC
CTTTTTCTATGGCAAAGCCGGGCTTCCAAGGTAG
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