mRNA_C-linearis_contig1.115.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: D7FJ00_ECTSI (Suppressor of lin-12-like protein-related / sel-1 protein-related n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ00_ECTSI) HSP 1 Score: 651 bits (1680), Expect = 5.830e-224 Identity = 350/545 (64.22%), Postives = 396/545 (72.66%), Query Frame = 2
Query: 2 SLVAMIRLWQETLSPDQIEAVFRASKPLFFGEASDTLASRYPSIHAVESMWTR-EHPKIYVSLLLAGREQLDGEAASSCGREKEAEARATAVAQWTTGGARVAVEQLELAVEAGSHRGAYTLAQLLLTGLGGTAAQGTSSVG--THDEEALTMYPRERNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAASWGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALKGQMVSFLAIGDAFFYGKAGLPR 1627
SLV+++RLW+ LSPDQ++AVF+ASKPLF EAS LASRY SIHA+ SM +R + Y SLLL GREQLDGE A+ CGRE E EARATAVAQW GGARV V+QLELAV GS R AY LA +L+GLGGTAA S T +E++ + PTTSR +ALLHFAAVGG+ EAQLALGLRYL+GNGVQLDLETAA++LAC + AH EY VGKQPILEMQRLT ANEAVVE+GQKGEDDD +QYQI RAEQGD+PSIEA+GDLYYWGARGV RDQ+RALQYF+ A AGSNNARCAAAGMYLKGEGT+ NHT ERA+NM+Q+ DSLFN AHCLA G+GTDQDLERAAEL+RL A WGHVD A A YL++VA GPWG+RLRLAFDCYLQGDMLSAL +Y++ AELGYEVAASN AFLLD GK+ DG FQGG S PVWSETMAVRLH++AA KG SFLAIGDAFFYG+AGLPR
Sbjct: 354 SLVSLVRLWKGALSPDQVDAVFQASKPLFLREASTALASRYSSIHAIVSMTSRMQTTSTYASLLLTGREQLDGENAARCGRETELEARATAVAQWNDGGARVVVDQLELAVLGGSFRAAYMLATTMLSGLGGTAAHDRSIAANTTREEDSDRGSLKRWKVPTTSRAIALLHFAAVGGYFEAQLALGLRYLQGNGVQLDLETAAYYLACVCDKAHAEYHLVGKQPILEMQRLTAANEAVVEVGQKGEDDDALQYQIHRAEQGDVPSIEAMGDLYYWGARGVTRDQSRALQYFNRASDAGSNNARCAAAGMYLKGEGTKVNHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERASNMKQEADSLFNTAHCLAHGIGTDQDLERAAELFRLGAGWGHVDCAYELGYMYAQGIGVERDPALTAKYLAVVAQAGPWGRRLRLAFDCYLQGDMLSALTMYSEAAELGYEVAASNAAFLLDEGKLRLDGELFQGGRSAPVWSETMAVRLHIMAATKGYAPSFLAIGDAFFYGRAGLPR 898
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S2WD54_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD54_9STRA) HSP 1 Score: 254 bits (650), Expect = 1.520e-73 Identity = 161/425 (37.88%), Postives = 223/425 (52.47%), Query Frame = 2
Query: 461 ERNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKI-----IFDGGGFQG-------------------------------GVSEPVWSET---MAVRLHVLAALKGQMVSFLAIGDAFFYG 1609
E + T + LLH AA +EA L+L RY G G++ + AA++ AA VAH ++ G QP EM RL+ ANE + G++GEDD+ +Q+ + +AE GD+ ++ L D YWG RG RDQ RA + + A AG+ A+ AAAGMYL+GEG RALNGLGY YF G LP++L KA+GYF+ AA ++QDGDSLFNA HCLA GLGT++D++RA +++ A+ +GH D+ + A YL A G WG R+R FD +L G+ L+AL LY + AELGYE+A SN A++LD + + D G G + S+T A+ H AA + S+LA+GDA+FYG
Sbjct: 105 EAGSSATPTGIGLLHAAAALDDTEAMLSLAHRYKHGLGLEQSDDAAAWYYRAAAAVAHDDFHIAGLQPSHEMNRLSEANEESLGEGERGEDDEQLQFLVAQAEHGDVGAMVTLADHLYWGHRGFARDQVRARELWDRAADAGNAAAQAAAAGMYLRGEGGXXXXXXXXXXXXXXXXXXXXRALNGLGYAYFFGTHLPKDLPKAFGYFQEAARLEQDGDSLFNAGHCLANGLGTERDMQRAVDMFDKASLRFGHFDAIYEMGGLHLHGRIPGQQRSVHEAMRYLIPAAHGGQWGGRVREGFDAFLGGNPLTALLLYFEAAELGYEIAESNAAYILDRALVDAPALLLDAPASSGPMLSAPPGTGQDQDATEHRDQGMLPAVVANRGKTFASGSQTHRLWALHYHRRAAGQDNFESYLALGDAYFYG 529
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S3ZY42_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZY42_9STRA) HSP 1 Score: 262 bits (669), Expect = 1.810e-73 Identity = 175/452 (38.72%), Postives = 234/452 (51.77%), Query Frame = 2
Query: 299 RVAVEQLELAVEAGSHRGAYTLAQLLLTGLGGTAAQGTSSVGTHDEEALTMYPRERNAP---TTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLT--TANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAAS-WGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVGPWGKR-LRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETM--AVRLHVLAA-LKGQMVSFLAIGDAFFYGKAGLP 1624
R V LE AV G + LA L L G T + ++ + R +A T R V LL+ AA+ G + A LAL RY G G E AA++ CAA +A E+ G+Q +E+ R+T T + V+ Q+G++D +Q Q+QRAE+GD+ + A GDL YWGARG RD RA ++F A A +ARC A M L+GEG +H +AV YE+AA +ALNGLGY YF G LP+N TKAYGYF AA + DGDS FNAAHCLA G+G +++++ AA LY AA+ GH D+ A W R +R FD YL+GD AL YA+ AE G +VAA+N A+LLD + + TM A+R H LA+ L G + A+GDA +G +P
Sbjct: 566 RKGVSYLERAVAMGDAAASRMLASLTLAGFVSTETKDLKAIAPPHTMGPVVASRLGDAVHTNNTERAVQLLYQAAMHGDARACLALSNRYRFGRGTSQSQEAAAWYAKCAAAIAKEEFHTPGEQTFVELNRITDETVADGSVDDNQRGDEDAQLQAQMQRAEEGDIDACVASGDLLYWGARGFQRDHVRARRFFKVAADADHAHARCLYASMLLRGEGGDTDHAEAVRQYEVAASAGSAKALNGLGYEYFYGNHLPKNSTKAYGYFAEAARLDADGDSNFNAAHCLAHGIGVEKNVKEAARLYERAATRHGHFDAAFEIALVKHGGSGRTGRDVNRAREFFEACARAGWAARDVRAGFDAYLRGDAGRALLWYAEAAETGTDVAAANAAWLLDRDSDV-----------RALVGNTMPLAIRFHRLASTLDGGGDGYAALGDAVLHGALVVP 1006
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A329S703_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S703_9STRA) HSP 1 Score: 260 bits (664), Expect = 3.100e-72 Identity = 159/393 (40.46%), Postives = 225/393 (57.25%), Query Frame = 2
Query: 464 RNAPTTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
+N S LLHFAA G +A LG RY + D+E A + AA A Y ++GKQP+ EM RL + E + +G++G+DD+LIQ+Q RA+ GD+ ++ A+GDLYYWGA GVPRD T+A YF+ A AG+ N++ A AGM LKGEGT ++ A++ YE A+E++H RALNGLG+++F G +P N T A YFERAA ++DGDS+FNA +C A GLGT ++ RA E Y +AA +GH D+ + A YL + G WG+ +R FD Y G+ A+ Y + ELGY VA SN AF+ D +++ G + +E A + +LA + G + + IGD +YG AGL +
Sbjct: 661 QNGQLDSLTTGLLHFAAATGEKDAFAMLGRRYRASHAS--DVEIATYHYYHAAVEAASVYHQLGKQPLHEMTRLYDSFERDITVGERGDDDELIQFQKLRADNGDVEAMAAMGDLYYWGAHGVPRDHTQAYNYFNRAAQAGNVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKASEKNHTRALNGLGFIHFHGSGGVPGNKTLALEYFERAAANKEDGDSIFNAGYCHAMGLGTSVNVSRAMEFYDMAAREFGHFDAIFEMGKILMIGVPGVVSRNSERALEYLKAASDGGQWGRVVRKGFDLYTDGEFERAVVAYHEARELGYPVATSNLAFVYDQ-RLLQPGN---------LANERRAHKYLLLANNENGDRETLVRIGDYHYYGLAGLRK 1041
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A6A4AAV4_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4AAV4_9STRA) HSP 1 Score: 256 bits (654), Expect = 8.190e-72 Identity = 160/386 (41.45%), Postives = 223/386 (57.77%), Query Frame = 2
Query: 497 LLHFAAVGGHSEAQLALGLRY---LEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAE-QGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
LLHFAA G +A LG RY +E + L + +F A A E+ ++GKQP+ EM RL + E V +G++G+DD+LIQ+Q RA+ +GD+ ++ A+GDLYYWGA G+PRD +A YF+ A AG N++ A AGM LKGEGT ++ A++ YE AAE++H RALNGLG+++F G +P+N + A YFERAA Q+DGDS+FNA +C A GLGT+ ++ RA E Y +AA +GH D+ T A YL + G WG+ +R FD Y G A Y + ELGY VA SN AFL D +++ G V SE A++ LA+ + G + + IGD +YG AGL +
Sbjct: 414 LLHFAAARGEKDAFAILGRRYHQNIERSNHGLGIAVYHYFHAAVEAAA--EFHQLGKQPLHEMTRLYDSFERDVTVGERGDDDELIQFQKMRADKEGDVGAMAAMGDLYYWGAHGIPRDHAQAYSYFNRAAQAGDVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKAAEKNHTRALNGLGFIHFHGSGGVPENKSFALEYFERAAENQEDGDSVFNAGYCHAMGLGTNVNVSRAMEFYDVAARKFGHFDAIFEMGKILMKGVQGVVPRDTKKALQYLKAASDGGQWGRAVRRGFDLYTNGQFDRAAVSYHEARELGYPVATSNLAFLYDQ-RLLRSG---------DVASERRALKYLSLASEENGDRETLVRIGDYHYYGLAGLRK 787
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A6A3M689_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3M689_9STRA) HSP 1 Score: 256 bits (654), Expect = 7.580e-71 Identity = 160/386 (41.45%), Postives = 223/386 (57.77%), Query Frame = 2
Query: 497 LLHFAAVGGHSEAQLALGLRY---LEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAE-QGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
LLHFAA G +A LG RY +E + L + +F A A E+ ++GKQP+ EM RL + E V +G++G+DD+LIQ+Q RA+ +GD+ ++ A+GDLYYWGA G+PRD +A YF+ A AG N++ A AGM LKGEGT ++ A++ YE AAE++H RALNGLG+++F G +P+N + A YFERAA Q+DGDS+FNA +C A GLGT+ ++ RA E Y +AA +GH D+ T A YL + G WG+ +R FD Y G A Y + ELGY VA SN AFL D +++ G V SE A++ LA+ + G + + IGD +YG AGL +
Sbjct: 678 LLHFAAARGEKDAFAILGRRYHQNIERSNHGLGIAVYHYFHAAVEAAA--EFHQLGKQPLHEMTRLYDSFERDVTVGERGDDDELIQFQKMRADKEGDVGAMAAMGDLYYWGAHGIPRDHAQAYSYFNRAAQAGDVNSQSAVAGMLLKGEGTAQDNVTAIKWYEKAAEKNHTRALNGLGFIHFHGSGGVPENKSFALEYFERAAENQEDGDSVFNAGYCHAMGLGTNVNVSRAMEFYDVAARKFGHFDAIFEMGKILMKGVQGVVPRDTKKALQYLKAASDGGQWGRAVRRGFDLYTNGQFDRAAVSYHEARELGYPVATSNLAFLYDQ-RLLRSG---------DVASERRALKYLSLASEENGDRETLVRIGDYHYYGLAGLRK 1051
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A7S1C3J9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3J9_9STRA) HSP 1 Score: 248 bits (633), Expect = 9.200e-68 Identity = 172/383 (44.91%), Postives = 218/383 (56.92%), Query Frame = 2
Query: 491 VALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDH--VRALNGLGYVYFTGLALPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAASWGHVDSXXXXXXXXXXXXXXXXXXATAATYLSMVATVG-PWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAAL-KGQMVSFLAIGDAFFYGKAGLPR 1627
+AL H AA+ G +EA L LG Y G GV +ET+A++ A + A+ ++ VG QP+ EM+RLT NE V GQ+G DD+ IQYQ+ +AEQG +PS A+GDLYYWGA GVPRDQ RA +YF A AG+ A+ A MYLKGEG AN+ AV Y A++ D VRALNGLG+ Y+ G + QNLTKA+ YF RAA QQDGDS FNA CLA XXXXXXXXXXXXXXXXXX A++G WG +R F+ YL GD A Y + ++GYE A+N +LLD GK + G + A R+ +L +G + S L +GD +YG GL R
Sbjct: 870 LALFHLAAMAGSTEAALVLGHAYYRGRGVPACMETSAWYYLAAVDEAYDQFHAVGSQPLNEMERLTEDNEDSVADGQRGVDDEQIQYQMMQAEQGHVPSQLAMGDLYYWGAHGVPRDQARAFEYFQQAADAGNPTAQVAVGNMYLKGEGVPANNVSAVAWYTKASKHDPPPVRALNGLGFAYYYGRGVEQNLTKAFEYFSRAAAEQQDGDSSFNAGMCLASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRPASLGGSWGGDVREGFELYLHGDHDGAALKYLRAMQMGYETGAANVGYLLDRGKASYRA--LVGAPERCAHCQLNAARMAYETSLAEGGLSSALKLGDYHYYGLGGLRR 1250
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: W2PQ44_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2PQ44_PHYPN) HSP 1 Score: 244 bits (622), Expect = 1.490e-66 Identity = 151/382 (39.53%), Postives = 213/382 (55.76%), Query Frame = 2
Query: 497 LLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
L+HFAA G +A LG RY D+E AA+ AA A + ++GKQP+ EM RL + E + +G++G+DD+LIQ+Q RA+ GD+ ++ A+GDLYYWGA GVPRD T+A YF+ A AG+ NA+ A AGM LKGEGT ++ A+ LNGLG+++F G +P+N T A YFERAA ++DGDS+FNA +C A+GLGT ++ RA E Y +AA +GH D+ + A YL G WG+ +R FD Y G+ A+ Y + ELGY VA SN AFL D +++ G + SE A++ +LA + G + + IGD +YG AG+ +
Sbjct: 668 LIHFAAASGEKDAFAMLGRRYRAS-----DVEIAAYHYYHAAVEAANAFHQLGKQPLHEMTRLFDSFERDITVGERGDDDELIQFQKVRADNGDVEAMAAMGDLYYWGAHGVPRDHTQAYNYFNRAAQAGNVNAQSAVAGMLLKGEGTAQDNVTAIXXXXXXXXXXXXXXLNGLGFIHFHGSGGVPENKTLALEYFERAALNKEDGDSIFNAGYCHAKGLGTSVNVSRAMEFYDMAAREFGHFDAIFEMGKILMLGVSGVVPRNSERAVEYLKAACDGGQWGRVVRKGFDLYTNGEYERAVVAYHEARELGYPVATSNLAFLYDQ-RLLQLGN---------IASERRALKYLLLANTENGDRETLVRIGDYHYYGLAGMRK 1034
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A024TVY4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TVY4_9STRA) HSP 1 Score: 243 bits (619), Expect = 1.940e-66 Identity = 157/388 (40.46%), Postives = 208/388 (53.61%), Query Frame = 2
Query: 476 TTSRVVALLHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQG-DLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXATAA-TYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALKGQMVSFLAIGDAFFYGKAGLPR 1627
T +AL H+AA G + + + L RY +G+GV+ D ETAA + AA A R Y G QP+ EM L A++ V GQ+GE+D IQ+Q RA+ D+ ++ A+GDLYYWGARG RD A +YF A GS AAAGM LKGEG ++ A+ YE AA ++VRALNGLGY++F G A QN +K +FE AA + DGDSLFNA +C GLGT + RA +R AA S+GH DS + A TYL V+ G WGK R FD YL G A+ LY + E GY VAA N A+L D+ + P + +A V A+L+ +GD ++YGK G+ +
Sbjct: 565 TLGEAIALFHYAASMGDASSNMILARRYEKGDGVEADGETAAHYYYIAAVDASRAYHTRGNQPLHEMNSLFHADQVNVAEGQEGENDKWIQFQKMRADHDQDVDAMVAMGDLYYWGARGCARDHPLAFEYFERAATLGSPIGMSAAAGMLLKGEGVAQDNETAIRWYEQAAMSNNVRALNGLGYIHFYGTANCTQNQSKGLEFFEHAAAQRTDGDSLFNAGYCHFVGLGTPANTTRALAYFRDAAHSFGHFDSIFELGKVALNVDGTFERHVSEAITYLRAVSAAGDWGKVARQGFDAYLSGQHHQAIWLYHEAREYGYPVAAGNLAYLYDA-------------MGLPNSATYLAEATEVEASLR--------LGDCYYYGKCGVGQ 931
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Match: A0A225WH48_9STRA (Suppressor of lin-12 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WH48_9STRA) HSP 1 Score: 243 bits (621), Expect = 2.220e-66 Identity = 146/381 (38.32%), Postives = 220/381 (57.74%), Query Frame = 2
Query: 500 LHFAAVGGHSEAQLALGLRYLEGNGVQLDLETAAFFLACAAEVAHREYRKVGKQPILEMQRLTTANEAVVEIGQKGEDDDLIQYQIQRAEQGDLPSIEALGDLYYWGARGVPRDQTRALQYFSSALFAGSNNARCAAAGMYLKGEGTRANHTKAVELYELAAEEDHVRALNGLGYVYFTGLA-LPQNLTKAYGYFERAANMQQDGDSLFNAAHCLARGLGTDQDLERAAELYRLAA-SWGHVDSXXXXXXXXXXXXXXXXXXAT--AATYLSMVATVGPWGKRLRLAFDCYLQGDMLSALALYAQVAELGYEVAASNGAFLLDSGKIIFDGGGFQGGVSEPVWSETMAVRLHVLAALK-GQMVSFLAIGDAFFYGKAGLPR 1627
+HFAA G +A LG RY +++ T ++ A A + +++ ++GKQP+ EM RL + E V G++G+DD+LIQ+Q RA++GD+ ++ A+GDLYYWGA G+ RD +A YF A AGS N++ A AGM LKGEGT ++ A++ YE A+E+++ RALNGLG+++F G +P+N + A +FE AA ++DGDS+FNA +C A GLGT+ ++ RA E Y +AA +GH D+ + A YL + G WG +R FD Y G+ A LY + ELGY VA SN AFL D +++ G + SE A++ ++ + G + + IGD +YG AG+ +
Sbjct: 697 IHFAAASGEKDAFAMLGRRYHALGHSAVEIATYHYYQA--AVQSSKDFHQLGKQPLHEMTRLYDSFERDVTAGERGDDDELIQFQKLRADKGDVDAMAAMGDLYYWGAHGISRDHAQAYNYFHRAAQAGSVNSQAAVAGMLLKGEGTAQDNVTAIKWYERASEKNNTRALNGLGFIHFHGSGGVPENKSLALEFFELAAGNEEDGDSIFNAGYCHAIGLGTNVNISRAMEYYDVAARKFGHFDAIFEMGKILMNGVPGVVSRNSGRALDYLKAASDGGQWGSTVRKGFDLYTDGEFDRAAVLYHEALELGYPVAISNLAFLYDQ-RLLQPG---------DIMSERRALKYLLMTNKENGDRETLVRIGDYHYYGLAGIRK 1065 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig1.115.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig1.115.1 >prot_C-linearis_contig1.115.1 ID=prot_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=539bp MIRLWQETLSPDQIEAVFRASKPLFFGEASDTLASRYPSIHAVESMWTREback to top mRNA from alignment at C-linearis_contig1:1634640..1638797+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig1.115.1 ID=mRNA_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=4158bp|location=Sequence derived from alignment at C-linearis_contig1:1634640..1638797+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig1:1634640..1638797+ >mRNA_C-linearis_contig1.115.1 ID=mRNA_C-linearis_contig1.115.1|Name=mRNA_C-linearis_contig1.115.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3234bp|location=Sequence derived from alignment at C-linearis_contig1:1634640..1638797+ (Chordaria linearis ClinC8C monoicous)back to top |