mRNA_A-nodosum_M_contig1038.22.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE) HSP 1 Score: 604 bits (1558), Expect = 4.860e-189 Identity = 356/714 (49.86%), Postives = 450/714 (63.03%), Query Frame = 2
Query: 1772 LGDVQHALELVSRFESDEGTYFVEEKVNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFRDLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYG-----GIVALVERISKEGATSIQVPPAWDLALKVVDALRAGDNPLRAARAHLGL-NETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHKLLAEDFPTTDLKYQRDSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFL--SDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCTLSLRMI-----GPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARIGGQLLGQDARDVHTLRCDCRREANGVLQLVHQRLGTVVDT 3874
LG+ + AL LV R + + L GNPW MPPE VVE GL A+K +L DVR+A + GA V SL+LLKVVLVG+ASAGKTSLM SII G SPT GT +ASTVG+EL P L++T++EF+DCAGQVDYAGMHQTFL+RRALYLLV D+ + +D+ L + ++ +IMRWLY L+LRAPG+TV+LVANKCDGS+ D FAET E+++R V+ L+ W + R G+ RSK + T + LL G+SR SC G G+ AL+ IS++ AT+I VPPAWDLAL+V+ ALRA NP+ AAR LGL N A+ + F +K EL + W +V + ++ ++ N ESAL GALWIS+FAG LR+D GIFLDV+WLSK LSPILSHKL + F L + RD L G+LR FA H+WR+ + S V +LF VL+KLGV LP+GR L SDR D S DMLVIMRLSE ++ Q+ D + RD V LKWEFD A PYGL+ERLI+SCHV+GE+E CWRYGA+F SH M + + R VR YK +S + S R+ GPL +RV A+RYVASAM+ LS EWPG W GWLDC HP +Y+ +AR+G LL A D RCDC E GVL+L + LG V+DT
Sbjct: 9 LGETEDALRLVERLG---------DSLYLHGNPWIMPPEGVVEAGLTAVKRYLVDVREAKKAGADVTSLQLLKVVLVGSASAGKTSLMHSIIAGRGSPTEGTPAQASTVGMELRPCQLQDTKVEFFDCAGQVDYAGMHQTFLTRRALYLLVVDITKYHGVDD--LDKAIHDDIMRWLYYLYLRAPGSTVVLVANKCDGSI--------DKFAETAERIQRRVRELVAVWHEAR----GLRG--RSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFA--FISKDELSRKWRSVVDNLRDDVPAAMIS-----NWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQPFENRWL-WMRDDLAGDGILRREFALHIWRESVGEVVMESE-EVAEALFSVLIKLGVALPMGRRTLLAHSDRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRD--RVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHDMRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHLYMASSVEARVGDPLLPAAAPDAR--RCDCLLEPGGVLRLAVEELGPVIDT 684
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: A0A6H5JW02_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW02_9PHAE) HSP 1 Score: 560 bits (1442), Expect = 8.700e-171 Identity = 335/711 (47.12%), Postives = 435/711 (61.18%), Query Frame = 2
Query: 1772 LGDVQHALELVSRFESDEGTYFVEEKVNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFRDLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGGIVALVERISKEGATSIQVPPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHKLLAEDFPTTDLKYQRDSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFL-SDRRGSHTSHDDGESKDMLVIMRLSEK--RSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCT------LSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARIGGQLLGQDARDVHTLRCDCRREANGVLQLVHQRLGTVVDTR 3877
+G+ +HAL ++R E + L GNPW MPPE VVE+GL A++ +L DVRKA E GA+V++LKLLKVVLVG++ AGKTSL+ SI++G PTVGT E STVGIEL + L+ T +EFYDCAGQVDY GMHQ FL+RRALYLLVWDV + +L EV++ +IMRWLY LHLRAPG+TVILVANKCDGS+ +DF T VE V L +EW+K R G S TR + +L+ S SC + G+ +++RI+ + A S++VPPAW LAL +DALR +P +A R L L + G +F T++ L++ W+ +V V ELRS A+ M A + + A+ GALWISEFAGQVLR+ + G+FLDVVWLS L PIL HKL+ + FP R+ LVH G+LR FA+HLW DV+ V+ +L RV++ LGV LPL + L R T + +DMLVIMRL E E QE I S + H D +EV L W FD+A PYGLVER+I+SCH +G +E +CWRYGA+F S M D RLY F++ YD+ LS+RM GPL D+RV ALR+VAS++V +S +WPG W+GW C + R Y +A IG LL A CDC VL+LV +RLG VVDT+
Sbjct: 161 VGEAEHALRWLTRRS--------ECLIVLGGNPWIMPPEGVVEKGLPAVESYLLDVRKAEEAGAEVKTLKLLKVVLVGSSQAGKTSLVNSIVEGRGLPTVGTPAEVSTVGIELLRHNLQGTAVEFYDCAGQVDYYGMHQNFLTRRALYLLVWDVLRCHGKTDDDLDEVIFQDIMRWLYVLHLRAPGSTVILVANKCDGSI--------EDFTGTAAVVEERVAVLRKEWRKAR----GFSSTRMDMD----MTVLERSSLVSCLDGVGLQEMIDRIAAQSAASMRVPPAWGLALTFLDALRDSRDPQQACRDCLSLGSRPKVGADREPG--RSFFTENSLVEQWKGVVQNVEGELRSDAEKM-AVSDPDGAIEGALWISEFAGQVLRVANGDGVFLDVVWLSTALKPILDHKLVHKVFPQ-HFAGMRNELVHNGILRIAFAEHLWSDVMEITVPEE---VLDALCRVIVNLGVALPLEPASLLPGSGRALATGRPNISRQDMLVIMRLPETCGAEHELQELI-SDQMRRHSD-REVTLMWRFDSAGPPYGLVERVIASCHAVGVVEMGLCWRYGAVFQSRAMATSDGSD-RLYTFVVRYDSAVGNERRILSMRMFGPLQDNRVWAALRWVASSVVNISKDWPGVLWEGWPQCARRHRNRTYFATSDKASIGDFLLADAATGATRRGCDCLAVEGTVLRLVLERLGKVVDTQ 837
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 1.240e-151 Identity = 323/732 (44.13%), Postives = 424/732 (57.92%), Query Frame = 2
Query: 1766 SDLGDVQHALELVSRFESDEGTYFVEEKVNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQI-EFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFRDLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGGIVALVERISKEGATSIQVPPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHKLLAEDFPTTDLKYQRDSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPA-FLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQE------VKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDN------CTLSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARIGGQLLGQ-DARDVHTLRCDCRREANGVLQLVHQRLGTVVDTREVSGKGDSKFDIG 3916
S LG + AL+ V+R G + + L NPW MPPE +V +GL A++ +LRDVR+A E GA+V++L +LKVVL+G+ AGKTSL+ SI+ S TVGT E STVGIEL + +I EFYDCAGQVDY GMHQTFL+RRALYLLVWDV + +L +VV +IM+WLY LHLR PG+ V+LVANKCDGSL +F T VE + L+EWQ RK GV T + +L S SC + GG+ ++ R+ +GATSI VPP+W LAL +DALR +P A R L L + AE+G +G ++F T+S L + W D V V+ EL S A+ M A + A+ GALWISEFAG +LR+ IFLDVVWLS L PILSHKL + FP ++L +D LV GVLR FA++LW D+ A V+ +L VL LGV LPLGR + +H +DMLVIMRL D +E I + RD E V LKW FD A A +GLVER+I+SCH +G + +CWRYGA+F S+ D LY F+I YD L++ M GP ++DR+ ALR+VAS++V S WPG +W+G C H + R+Y P +ARIG +L D R + CDC ++LV +RLGT++DT++ G D G
Sbjct: 316 SALGQAEQALQFVARL----GQLASGQNLRLQDNPWVMPPEGIVNEGLPAVEKYLRDVREAEEAGAEVKTLNVLKVVLIGSPGAGKTSLLNSIVNERGSRTVGTSEEVSTVGIELRRHHQRNGRIVEFYDCAGQVDYYGMHQTFLTRRALYLLVWDVSRCHGKESNDLDKVVSEDIMKWLYALHLRVPGSAVLLVANKCDGSL--------QEFVGTAGAVESSARRQLQEWQGNRKS-PGV----------TKLTILQQPSLVSCDDGGGLSEVIARVDAQGATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHL-DFDAEVGAA-QG--SSFMTESTLFQRWNDTVKSVAGELTSPAERM-AVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESHFFPRSELTAMKDELVDNGVLRLKFAEYLW-DLEMEAPPSE--EVMDALCGVLHSLGVALPLGREERHTASAIDPAAAHGQIGRQDMLVIMRL----PDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARA-DDGGLNWLYSFVIRYDEEVGSGERVLAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRMYFKTPIEARIGDPILTDPDPRTAPNV-CDCYTTEGNAMRLVLERLGTIIDTQKDDPFGHLHHDEG 1010
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 205 bits (521), Expect = 1.040e-50 Identity = 194/703 (27.60%), Postives = 312/703 (44.38%), Query Frame = 2
Query: 1850 VNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFR--------DLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGG---------------------------------IVALVERISKEGATSIQV--PPAWDLALKVVDALRAGDNP-----LRAARAHLGLNETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHK-----------------LLAEDFPTTDLKYQRDSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCTLSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYL---TPPGQARI 3754
++L+ NPW PPE++V +GL++++ + D+ A + R +K VVLVG AGKTSL +S+ ++PT G E STV ++ P LE + + YDCAGQV Y G+ Q FL+ R++ +LV + FR D E + +++ + WL ++ R PG VILVA KCD L N + ET +++E + L W + D VRL VS TSC G + LV + + G +Q+ P +WD+AL +D+L G +P L++ + G ET+ +G+T EL W+ V ++ R + +T T N E+AL GAL I EF G + + +K +FLDVVWL+++L P+L+HK + D P+ + R L + GVL A +W D L+ + L LG+I PL ++ ++ ++V++RL R + E ID+ + + W+ P G VE++++ C +G ++ WRYG L + R + S DN L ++ G +S A+ YV SA+ ++ +++PG +W G L CP H +++ +PP R+
Sbjct: 133 LSLNSNPWAEPPESIVAKGLKSVRGYFEDLF-ADHCRIKRRGVK---VVLVGQEGAGKTSLRQSMKANKATPT-GEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCD--LVN------GNVEETGQRIEHACRTWLSSWVRNGMDS---------------VRLERHVSLTSCFPIGASEHGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGIT-----VEELSARWQGTVDELGR------RGITVT-NAENALEGALSIREFDGSL--VCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDR--LKNEGVLEPRLADAIWPDGLSEY-----------VLPTLASLGLIFPL----------------ENDPAEGLVVLLRLKPHRPESVGEVIDTFCSGL---TPAFRASWKVFLGVPP-GAVEKVLTRCCALGGVQ--TFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDN-ELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQHGDGMLFVNKVSPPHAYRL 757
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI) HSP 1 Score: 194 bits (493), Expect = 2.770e-46 Identity = 216/740 (29.19%), Postives = 333/740 (45.00%), Query Frame = 2
Query: 1850 VNLS--GNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFR--------DLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCD----------GSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGD-GVSRTRRSKSNQTVV---RLLDGVSRTSCANYGGIVALVERISKEGATSIQV--PPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFTT--KSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHK--------LLAEDFPTTDLKYQRDS---------LVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPL-GRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYD--NCTLSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARIGGQLLGQDARDVHTLRCDCRREANGVLQLVHQRLGTVVDTREVSGKGDSKFDIGSQQ 3925
VNL+ GNPW PPE++V +G ++I+ + D+ +E RS +KVVLVG AGKTSL +S+ ++PT G E STV ++ P LE + + YDCAGQV Y G+ Q FL+ R++ +LV + F D E + +++ + WL ++ R PG VILVA KCD L + C +L + RL H+ DG+ G S T S Q R ++G + Y LV + + G +Q+ P +WD+AL V++AL G +P+ L ++ ET G TN + EL W + V ++ + + + T N E+AL GAL I EF G ++R +K +FLDVVWL+++L P+L+HK + D T D + D L + GVL A +W D L+ + L LG+ PL G P D+G ++V++RL R EAID+ F + + WE P G +E++++ C +G+++ WRYG L GD ++ + Y N L+ ++ G +S AL YV SA+ ++ M++PG +W+G L CP H + T A G + L + A ++++V RL V REV ++FD+ Q
Sbjct: 82 VNLALLGNPWAEPPESIVAKGPKSIRGYFEDLY--AEPCWIKRSS--VKVVLVGQEGAGKTSLRQSMKANKATPT-GEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAEETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDASKQGWACDWRHVEGDKSSPSLLY----RLVNKPDEGGLRGVQMVLPRSWDIALTVLEALEHGRDPVEMVL--LKSPDSERRPTETGVGKTNVYQAIKVEELGTNWRETVDELGK------RGIVVT-NAENALEGALSIREFDGSLVR--HEKFVFLDVVWLARILKPLLNHKDQRTFDGRVNLGD--TGDARITLDDSSDIASWGRLKNEGVLEPRLAYAMWPDGLSEY-----------VLPTLASLGLTFPLEGDP-------------DNG----LVVLLRLEPNRPASVGEAIDT-FCSKYTPA--FSASWEIFLGVPP-GAIEKVLTRCCGLGDVQ--TFWRYGVLVHGGL---GDLDGRGIFAVVTEYSSTNNELTAQIFGDISTSAPWVALSYVTSAVSLMLMDFPGLRWNGSLKCPQHGYEMPFATKVNCA--GDKFLERRCPRCSPQTRGLGAAAIDLIRMVDIRLDRGVIDREVK----ARFDVLESQ 756
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D7G431_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G431_ECTSI) HSP 1 Score: 189 bits (481), Expect = 9.750e-45 Identity = 209/774 (27.00%), Postives = 326/774 (42.12%), Query Frame = 2
Query: 1847 KVNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLF-RDLDERNLKEVVYT-------NIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSC-------------ANYGG--------------------IVALVERISKEGATSIQV--PPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFT--TKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHKLLAEDFP-------TTDLKYQRDS---------LVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCTLSL--RMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQA----------RIGGQLLGQDARDVHTLRC-DCRREANGVLQLVHQRLGTVVDTREVSGKGDSKFD--IGSQQKPKGI 3940
K+ L GNPW PPE++V++G ++++ + D+ ++ + KVVLVG AGK+SL +S+ +PT G E STV ++ P LE + + YDCAGQV Y G+ Q FL+ R++ +LV + F + L+ +N EV + WL ++ R P VILV KCD + N AE E+VE + L W + V+L GVS TSC N+G + LV + G Q+ P +WD L V+D+L G +P+ L+ + ET G T + T +L K W+ IV ++ R + + T N ++AL GAL I EF G ++R ++ +FLDV+WL+++L P+L+HK E F T D + D L + GVL A +W L+ + L LG+ PL D+G+ +V++RL +R D E ID+ F + H + W P G +E++++ C +G ++ WRYG L GD ++ ++ Y + L ++ G + AL YV SA+ ++ +++PG +W G L CP H + QA R + G A + LR D R + + V +R + KG FD GS +K G+
Sbjct: 102 KIVLDGNPWAEPPESIVDKGRKSMRSYFEDLYAEPCRIERIST----KVVLVGQEGAGKSSLRQSMKANEPTPT-GEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAAAFGQQLERKNSGEVEEDCRKLEELRVCDWLRSISRRVPHNDVILVVTKCDLAGGNA--------AEIGERVEHACRTWLSSW---------------VRHGMQPVQLEPGVSFTSCFPAEGGQHGEVGTENHGSKGDWACDWHDMKDDHPPPSLLHRLVNKPDGGGLRGAQMVLPRSWDTVLIVLDSLEQGRDPVEVV-LRKSLHPDRGDATETAGGNTVVYQGITVEDLSKKWQKIVDELER------RGIIVT-NAKNALEGALSIREFDGSLVRHETF--VFLDVLWLARILKPLLNHKD-QETFDGRVNLGDTGDARITLDDPLYIASWGRLKNEGVLEPRLAYAMWPGGLSEY-----------VLPTLASLGLTFPL------------EGDLDEGQ----VVLLRLKPERPDSVGEVIDT-FCSRHTPA--LSASWNIFLGVPP-GAIEKVLTRCCGLGAVQ--TFWRYGVLVHGGL---GDLGGRGIFAVVLEYSSTDHKLNGQIFGDIGTPAPWVALSYVMSAVSLMLVDFPGLRWGGALKCPQHGDAMLMANKVTQAGETFLKRRCPRCSTETKGLGAAAIDLLRMVDIRMDRGEIFDEVMERFDAL--------KGHYSFDGQAGSSKKKDGL 792
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.870e-43 Identity = 199/744 (26.75%), Postives = 313/744 (42.07%), Query Frame = 2
Query: 1850 VNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFR--------DLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGG---------------------------------IVALVERISKEGATSIQV--PPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFT--TKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHK--------LLAEDFPTTDLKYQR-------DSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCTLSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYL---TPPGQARIGGQLLGQDARDVHTLRCDCRREANGVLQLVHQRLGTVVDTREVSGK 3892
++LS NPW PPE++V +G ++I+ + D+ A + R +K VVLVG AGKTSL +S+ K + G E STV ++ LE + + YDCAGQV Y G+ Q FL+ R++ +LV + F D E + +++ + WL ++ R P VILVA KCD + N E ++E+ + L W R N VRL GV TSC G I LV + K G +Q+ P +WD+AL +D+L G +P+ L ++ G T T + T EL W++ V + R + +T T N E+AL GAL I EF G + + +K +FLDVVWL+++L P+L+HK + D T + D L GVL A +W + L+ + L LG+I PL ++ ++ ++V++RL R + + ID+ + + W+ P G +E++++ C +G ++ WRYG L + R + S DN L ++ G +S A YV SA+ ++ +++PG W G+L+CP H +++ T G + G Q + D L A +L+ V RL V EV +
Sbjct: 304 LSLSENPWAEPPESIVAKGPKSIRGYFEDLY-AEHCRIKRRGVK---VVLVGQEGAGKTSLRQSM-KANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGNAWEI--------GRRMEKACRRWLSSWACR---------------NMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLSKSCWACDWRDVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSLEHGRDPVEMVI----LKSPDSDRGATETAKTTVYQGITVEELSAKWQETVDGLGR------RGITVT-NAENALEGALSIREFDGSL--VPHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDSADIASWDRLKKEGVLEPRLAYAIWPNGLSEY-----------VLPTLASLGLIFPL----------------ENDPAEGLVVLLRLKPHRPESVGKVIDTFCSGL---TPAFRASWKIFLGVPP-GAIEKVLTRCCGLGGVQ--TFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDN-ELIAQIFGDVSTPGPWGATSYVMSAVSLMLVDFPGLGWKGYLECPQHGDGMLFVNKATRDGDKFLEGSRCPQCSADTGGLGA----AAIDLLRFVDIRLDRDVIFNEVKAR 968
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE) HSP 1 Score: 183 bits (465), Expect = 5.420e-43 Identity = 212/798 (26.57%), Postives = 336/798 (42.11%), Query Frame = 2
Query: 1643 LGGLSALERLDLSHNQLSGAIPSALXXXXXXXXXXXXXXXXSDL-GDVQHALELVSRFESDEGTYFVEEKVNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLF--------RDLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCD--GSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGG---------------------------------IVALVERISKEG--ATSIQVPPAWDLALKVVDALRAGDNPLRAARAHLGLNETSAELGETIEGVTNTFT--TKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHK-----------------LLAEDFPTTDLKYQRDSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCT--LSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARIGGQLLGQDARDVHTLRC-DCRREANGV 3832
LG L ALE+LDL+HN+LS + + L+++ + +G + + + L NPW PPE +V +G +A++ + D+ +E RS+ +KVVLVG AGKTSL +S+ ++PT G E STV ++ LE + + YDCAGQV Y G+ Q FL+ RA+ +LV + F D + +++ + WL ++ R P VILVA KCD G A K ++E + L W + +G+ VRL VS TSC G + LV + G T + +P +WD+AL V++AL G +P+ + + ET G T + T +L W++ V + R +T T N ++AL GAL I EF G ++R + K IFLDVVWL+K+L P+L+HK + D P+ + R L +GVL A +W + L+ + L LG+ PL +D +K ++V++RL R + AID+ F H + W+ P G +E++++ C +G + WRYG L R+ ++ ++ Y + L+ ++ G +S L YV SA+ ++ +++PG +W G L CP H T + A + G A + +R D RR+ V
Sbjct: 88 LGRLGALEKLDLAHNKLSALWDHTQNAEDIGHDEGTQRMSGGPMPSQLCRLLDVLDDIQ--QGKF---QSLKLGTNPWVEPPEPIVVKGPKAVRGYFEDLY--AEPCRIKRSI--VKVVLVGQEGAGKTSLRQSMKANEATPT-GEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDCRKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGNAGKIGA----------RMEHACRRWLSSWVR-----NGLQ----------PVRLEPCVSLTSCFETGVGEHGESSTGSHELKGGWACDWRDMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEALEHGRDPVEVV-LRKSPDPDRGDATETARGETAMYQGITVEDLSIKWQETVDGLERS------GVTVT-NAKNALEGALLIREFDGSLIRYE--KFIFLDVVWLAKILKPLLNHKDQETFDGLVSLGDTGDARITLDDPSDIASWGR--LKSQGVLEPRLAYAIWPNGLSEY-----------VLPALAFLGLTFPL----------------EDDPAKGLVVLLRLKPDRPESVGHAIDT-FCLDHTPA--LSASWKIFLGVPP-GAIEKVLTRCCGLGGVR--TFWRYGVLVHGGLGEVHVGRR-GIFAVVLEYSSTDNELAAQIFGDISTPAPWVVLSYVMSAVSLMLLDFPGLRWRGSLTCPQHGDTMLL------ANKASPVAGLGAAAIDLVRMVDIRRDRRRV 798
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI) HSP 1 Score: 184 bits (468), Expect = 5.480e-43 Identity = 193/672 (28.72%), Postives = 303/672 (45.09%), Query Frame = 2
Query: 1850 VNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFR---------DLDERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCD---------GS-LANKCETYLDDFAETTEKVERLVKHL-LEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANYGG-------IVALVERISKEGATSIQV--PPAWDLALKVVDALRAGDNPL-----RAARAHLGLNETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHK---------LLAEDFPTTDLKYQR------DSLVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPL-GRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCT--LSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTH 3709
V L GNPW PPE+VV +G ++I+ + D+ +E RS +KVVLVG AGKTSL +S+ +SPT G E STV + P L+ + + YDCAGQV Y G+ Q FL+ R++ +LV + F ++++ + +++ + WL ++ R P VILVA KCD GS + N C T+L + + RL H+ L R G RS N + G N + LV + G Q+ P +WD+AL V++AL G +P+ ++ G + + +G+T EL W++ V ++ R + +T T N +AL GAL I EF G ++R +K +FLDVVWLS++L P+L+HK L + T + + D L GVL A +W L+ + L+ +G+ PL G P D G ++V++RL R + E ID+ F + H WE P G +E++++ C +G+++ WRYG L GD ++ ++ Y + L+ ++ G +S AL YV SA+ ++ +++PG +W G L CP H
Sbjct: 367 VGLGGNPWTEPPESVVAKGPKSIRGYFEDLY--AEPCRITRSS--VKVVLVGQEGAGKTSLRQSMKANKASPT-GKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGNAGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGE----RSAGNH----VWKGGWACDWRNVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEALEHGRDPVEVVLRKSPEPDRGDETETGGKADVYQGIT-----VEELGTKWQETVDELER------RGITVT-NMMNALEGALSIREFDGSLVR--HEKFVFLDVVWLSRILKPLLNHKDQRTFDGRVKLGDTGDTRITLHDQSDIDSWDRLKSEGVLEPRLANAMWPHGLSEY-----------VLPTLVSVGLTFPLEGDP-------------DAG----LVVLLRLEPHRPESVGEVIDT-FCSKHTPA--FSASWEIFLGVPP-GAIEKVLTRCCGLGDVQ--TFWRYGVLVHGGL---GDLDGRGIFAVVVEYSSTDNELTAQIFGDISTPAPWVALSYVMSAVSLMLVDFPGLRWKGCLKCPQH 974
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 171 bits (433), Expect = 5.840e-39 Identity = 185/700 (26.43%), Postives = 302/700 (43.14%), Query Frame = 2
Query: 1850 VNLSGNPWKMPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTSLMRSIIKGASSPTVGTLYEASTVGIELSPYLLEETQIEFYDCAGQVDYAGMHQTFLSRRALYLLVWDVKLFRDL-----------DERNLKEVVYTNIMRWLYNLHLRAPGATVILVANKCDGSLANKCETYLDDFAETTEKVERLVKHLLEEWQKRRKDGDGVSRTRRSKSNQTVVRLLDGVSRTSCANY---------------------------------GGIVALVERISKEG--ATSIQVPPAWDLALKVVDALRAGDNPLRAARAHLGL--NETSAELGETIEGVTNTFTTKSELLKLWEDIVCQVSRELRSSAKDMTATYNRESALHGALWISEFAGQVLRIDSDKGIFLDVVWLSKVLSPILSHKL------LAEDFPTTDLKYQRDS---------LVHRGVLRWGFAQHLWRDVLTSAGQRSTGRVIGSLFRVLLKLGVILPLGRPAFLSDRRGSHTSHDDGESKDMLVIMRLSEKRSDEQQEAIDSSFVNVHRDCQEVKLKWEFDAAQAPYGLVERLISSCHVIGELEQDVCWRYGALFTSHQMTWGDNRQVRLYKFLISYDNCT--LSLRMIGPLSDDRVLDALRYVASAMVVLSMEWPGAKWDGWLDCPTHPKTRIYLTPPGQARI 3754
+ L NPW PP ++V +G +I+ + D+ S Q S+K ++LVG AGKTSL +S+ A+ PT G E STV ++ P LE + + YDCAGQV Y G+ Q FL+ R++ +LV + + F D R L+E+ + WL ++ R P VILVA KCD N ++F ++E+ + L W DG+ VRL GV TSC G + LV + G T + +P +WD+AL V++AL G +P+ HL E + GV T ++ +K W++ V ++R + + T N ++AL GAL I EF G ++R + +FLDVVWL+++L P+L+HK L T D + + L ++GVL A+ +W + L+ + L LG+ PL +D G ++V++RL+ R + + ID+ ++ W+ P G +E++++ C +G ++ WR G L GD ++ ++ Y + L+ ++ G +S AL YV SA+ ++ +++PG + G L CP H + + QA +
Sbjct: 197 LGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSR-VQRNSVK---IILVGQEGAGKTSLRQSMKANAAIPT-GEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKLEEL---RVCDWLRSVSRRVPNNDVILVATKCDLVGGNA-----EEFGR---RIEQATRTWLASWVH-----DGMQ----------PVRLEPGVCLTSCCASAVGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVK-WQEAVVGLAR------RGVNVT-NAKNALEGALSIREFDGSLVR--HEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTLEDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKY-----------VLPTLASLGLTFPLK-----NDPAGG-----------LVVLLRLNPDRPERVGKVIDTFCLDQ---TPAFSTSWKIFLG-VPAGAIEKVLTRCCSLGGVQ--TFWRSGVLVHGGL---GDEDGHEIFAVVLEYSSSDNELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQHGDAMLLVNKMTQAGV 819 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1038.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1038.22.1 >prot_A-nodosum_M_contig1038.22.1 ID=prot_A-nodosum_M_contig1038.22.1|Name=mRNA_A-nodosum_M_contig1038.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1099bp MPPEAVVEQGLEAIKIFLRDVRKASENGAQVRSLKLLKVVLVGAASAGKTback to top mRNA from alignment at A-nodosum_M_contig1038:205977..225584- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1038.22.1 ID=mRNA_A-nodosum_M_contig1038.22.1|Name=mRNA_A-nodosum_M_contig1038.22.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=19608bp|location=Sequence derived from alignment at A-nodosum_M_contig1038:205977..225584- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1038:205977..225584- >mRNA_A-nodosum_M_contig1038.22.1 ID=mRNA_A-nodosum_M_contig1038.22.1|Name=mRNA_A-nodosum_M_contig1038.22.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=3297bp|location=Sequence derived from alignment at A-nodosum_M_contig1038:205977..225584- (Ascophyllum nodosum dioecious)back to top |