mRNA_A-nodosum_M_contig996.30.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: D7FHZ6_ECTSI (Cytochrome b5 heme-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHZ6_ECTSI) HSP 1 Score: 274 bits (700), Expect = 3.970e-79 Identity = 177/395 (44.81%), Postives = 214/395 (54.18%), Query Frame = 2
Query: 5 RCLSLPSPTDLS--ELKRSHSALPIVE----PDTSRVAGEALCRFTRRGCSEKSLEALKREESRDMSPQAQVRSASLGSFENRGISASCKLPG-----------------------------------------ESVVPDTAVSPTPPGNLQKKESLSNSGEGGDCKSKGL-GESACSIVSLEDAAQRIAADPISGQLFFVERTTVCDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGS-----------VGTLRGGERIRRISSRNRLIAPVLSRRYPRKSTYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDFLFHSKAARKHWRRYKIGNLVACS-GEDVESSDEIDGERFSRAASDCVI 1009
R +SLPSP +LS E++ +H+ +P+ T V G R S LKR+ RD+ QA RSAS GS + + SC+ G E+ P SP P S+ G + G G +A ++ SLEDAAQRIA DP SG +FVER+TVCDACP CED CEV WCN CD+ R LEEAYG LM+S +E+ G G GG SR +L APVLSRRYPRKS+YTLCEVRRRK+TGACWVV +G VYDVTAAL DHPGGKRS+L+NAGGRDC EDF FHS+AA+K WR+Y+IG+LVAC G+ ER R AS CVI
Sbjct: 36 RRMSLPSPAELSVIEIEDAHTPIPLGGFPGGSPTGEVIGTPGRPHRERNHSGGGFVTLKRKGVRDVVRQAHARSASAGSVGGKP-AGSCRTCGXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCGYDERDHVHDLEANEPLGPPSPMPFRRPSGSGSVGGRGSXXXRRGSGTPGSAAAAVASLEDAAQRIAVDPDSGHSYFVERSTVCDACPYCEDTCEVAWCNGCDETRMHLEEAYGKLMLSAAEVAGAGGRHXXXXXXCETGADNGG------GSRLKL-APVLSRRYPRKSSYTLCEVRRRKVTGACWVVSQGSVYDVTAALPDHPGGKRSVLKNAGGRDCAEDFFFHSRAAKKQWRQYRIGSLVACRPGQGDGDGGAAGDERSMRIASSCVI 422
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A7S3LGK6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGK6_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.160e-20 Identity = 55/155 (35.48%), Postives = 72/155 (46.45%), Query Frame = 2
Query: 479 CDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGSVGTLRGGERIRRISSRNRLIAPVLSRRYPRKSTYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGG-RDCIEDFLFHSKAARKHWRRYKIGNLVACSG 940
C+ACP C D C D C C ++ L +S P R +TLC+VR+ + W+V +YDVTA ++ HPGG+ ILR AGG RDC +DF FHSKA R+ W +YK+G LV C G
Sbjct: 49 CEACPYCSDTCGDDSCKLCVNKTC--------LEIS----------------------------TPTCPPRSASLPVFTLCQVRKHCTEKSVWIVAGKDIYDVTAYIDRHPGGRECILRKAGGARDCTDDFQFHSKAGRRGWNKYKVGVLVPCPG 167
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A422NRL8_TRYRA (Cytochrome b5 n=1 Tax=Trypanosoma rangeli TaxID=5698 RepID=A0A422NRL8_TRYRA) HSP 1 Score: 86.3 bits (212), Expect = 1.090e-15 Identity = 39/75 (52.00%), Postives = 51/75 (68.00%), Query Frame = 2
Query: 710 YTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGG-RDCIEDFLFHSKAARKHWRRYKIGNLVA 931
+TL EVR+ + W+V VYDVT+ L+ HPGG ++LR +GG +DC EDF FHS+AAR+ W YKIG L A
Sbjct: 18 FTLDEVRQHNDRLSTWIVAGNFVYDVTSILDTHPGGANALLRRSGGVKDCTEDFYFHSRAARRTWDHYKIGELDA 92
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A0M9G1N5_9TRYP (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9G1N5_9TRYP) HSP 1 Score: 79.0 bits (193), Expect = 3.590e-13 Identity = 37/83 (44.58%), Postives = 55/83 (66.27%), Query Frame = 2
Query: 680 LSRRYPRKSTYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGG-RDCIEDFLFHSKAARKHWRRYKIGNL 925
L++++P T+T EV + T + WVV V+D+T L HPGGK ++L+ GG +DC ED +FHS+AAR+ ++YKIG L
Sbjct: 11 LAQKWP---TFTREEVSKHNTTDSLWVVIDNSVFDITPILGQHPGGKCALLKRGGGVKDCAEDMMFHSRAARQDAKKYKIGEL 90
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A2D4CBX4_PYTIN (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX4_PYTIN) HSP 1 Score: 82.4 bits (202), Expect = 3.720e-12 Identity = 54/158 (34.18%), Postives = 75/158 (47.47%), Query Frame = 2
Query: 479 CDACPCCEDVCEVDWCNNCDDRRAQLEEAYGPLMVSLSELQGGSVGTLRGGERIRRISSRNRLIAP-----VLSRRYPRKSTYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNA-GGRDCIEDFLFHSKAARKHWRRYKIGNLVAC 934
CDAC CC DVCE D C C ++ QL A+ S LR R S+ ++ AP V S + Y+ CE+RR + +CWV+ G+VYDVT L H GG +++L A G+DC + H AR+ Y++G C
Sbjct: 1175 CDACICCNDVCENDGCFFCAEKEYQLRLAF-----------ASSSSVLRR----ERSSATSKPSAPGAASSVASSYFNVDRKYSSCELRRHQHQRSCWVLVDGLVYDVTDLLGVHSGGMQALLDAARSGKDCGDLMRQHPPEARRMLAAYRLGEFYVC 1317
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A058Z979_FONAL (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z979_FONAL) HSP 1 Score: 68.6 bits (166), Expect = 2.300e-10 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 2
Query: 695 PRKSTYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDFLF--HSKAARKHWRRYKIG 919
PR +TY+ E+ CW++ +G VYDVTA L DHPGG R ILR+AG RD E FL HS A+ R++ IG
Sbjct: 17 PRFATYSREEIAMHNSADDCWIIIEGRVYDVTAFLNDHPGGARIILRHAG-RDATEAFLDIGHSARAQVLLRKFLIG 92
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A0D2WRW4_CAPO3 (Cytochrome b5 heme-binding domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WRW4_CAPO3) HSP 1 Score: 73.6 bits (179), Expect = 4.900e-10 Identity = 35/74 (47.30%), Postives = 48/74 (64.86%), Query Frame = 2
Query: 710 YTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDFLFHSKAARKHWRRYKIGNLVA 931
YT +V + +CW+V +GVVYDVT L+ HP G +ILR+AG +D DF FH ++K W++Y IG LVA
Sbjct: 282 YTRDQVAQHNSRESCWLVVRGVVYDVTDFLKFHPAGANAILRHAG-QDATVDFDFHDGHSQKLWKKYIIGKLVA 354
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: D0EP49_AGATN (Nitrate reductase n=1 Tax=Agarophyton tenuistipitatum TaxID=2510778 RepID=D0EP49_AGATN) HSP 1 Score: 74.7 bits (182), Expect = 7.350e-10 Identity = 43/91 (47.25%), Postives = 54/91 (59.34%), Query Frame = 2
Query: 674 PVLSRRYPRKST----YTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDFL-FHSKAARKHWRRYKIGNLVA 931
PV S P ST +T+ +V ++ + W+V +G VYD T LEDHPGGK SIL NAG +D E+FL HS A+K Y IG LVA
Sbjct: 518 PVKSGSAPSLSTMIKSFTMKDVEKQNSEDSAWIVVEGKVYDATPYLEDHPGGKASILMNAG-QDATEEFLAIHSDKAKKMLEDYYIGELVA 607
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A316Z972_9BASI (Putative cytochrome b5 n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316Z972_9BASI) HSP 1 Score: 66.2 bits (160), Expect = 9.610e-10 Identity = 36/79 (45.57%), Postives = 49/79 (62.03%), Query Frame = 2
Query: 707 TYTLCEVRRRKITGACWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDF-LFHS-KAARKHWRRYKIGNLVACS 937
T++ EV++ + WVV G VYDVT+ L+DHPGGK+ +LRN GG+D E F +HS K +K + KIG L S
Sbjct: 4 TFSAEEVKKHASEESVWVVVDGGVYDVTSFLDDHPGGKKILLRN-GGKDATEAFWTYHSEKVLKKQGGKLKIGELEPSS 81
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Match: A0A6A5BJU8_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BJU8_NAEFO) HSP 1 Score: 72.8 bits (177), Expect = 1.390e-9 Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 2
Query: 752 CWVVCKGVVYDVTAALEDHPGGKRSILRNAGGRDCIEDF--LFHSKAARKHWRRYKIGNLVACSGEDVESS 958
CW++C G+VYDVT L +HPGG +++NAG +DC DF +FHS AR ++Y IG L+ + + SS
Sbjct: 37 CWMICHGLVYDVTTYLNEHPGGVNLMMKNAG-KDCTSDFEAMFHSPKARNILKKYLIGELLTEKNQSLGSS 106 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig996.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig996.30.1 >prot_A-nodosum_M_contig996.30.1 ID=prot_A-nodosum_M_contig996.30.1|Name=mRNA_A-nodosum_M_contig996.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=278bp MSPQAQVRSASLGSFENRGISASCKLPGESVVPDTAVSPTPPGNLQKKESback to top mRNA from alignment at A-nodosum_M_contig996:215336..218309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig996.30.1 ID=mRNA_A-nodosum_M_contig996.30.1|Name=mRNA_A-nodosum_M_contig996.30.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2974bp|location=Sequence derived from alignment at A-nodosum_M_contig996:215336..218309+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig996:215336..218309+ >mRNA_A-nodosum_M_contig996.30.1 ID=mRNA_A-nodosum_M_contig996.30.1|Name=mRNA_A-nodosum_M_contig996.30.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=834bp|location=Sequence derived from alignment at A-nodosum_M_contig996:215336..218309+ (Ascophyllum nodosum dioecious)back to top |