prot_A-nodosum_M_contig995.9.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig995.9.2
Unique Nameprot_A-nodosum_M_contig995.9.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length297
Homology
BLAST of mRNA_A-nodosum_M_contig995.9.2 vs. uniprot
Match: A0A6H5JWC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC0_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.220e-39
Identity = 97/297 (32.66%), Postives = 146/297 (49.16%), Query Frame = 0
Query:    1 MEEMYANPGGHLARESGSSGTGIGSDHVFQGPTREVGDLLRTNMNGALPRRSALLGYDGVVLR-SGKKAYIGETVMVDFRSENTASVRQVPRRLLALFWDMASSALVATVRMFHPVGEVGGNGDEKNHFGHHRMWEETGASAEIEVEPNALLHFCEILTPEEIDAGVHNEPWIHGERVFHGWTFVGEVFAESRRLRSNHSGGSTDLRLQVLPGKPWEKRGSDEDNFVDMQRQGIFHNDAGMPYKSIPLSMYIDAFRVYGWSNPTTEGATYIGMPSFSPALQRCRRHLYPITIAESGA 296
            + E Y  P G L RE  ++   + SDHV   PT++VG++  TNMNG L R S  +G DG+     G+K +I +  +       T        RLL LFWD+ S  +VATVR F    EV   G+ +   G  R WE+     E+ +E   +L   EI T +E+DA  H+  W  G R      F+GE F      +   +G     + +V    PW K G+ ++    ++R+G   N+  + + S P++ Y DAF  +G  N  + G  Y G P  + A+QR +R  +  T+A +GA
Sbjct:  274 LSEAY--PAGKLLREEEAAVNSLTSDHVNCVPTKQVGNVRETNMNGTLSRTSPFMGIDGIKGSVCGRKVFIHDVCICAVGGTPTVC------RLLELFWDVESRQVVATVRTFRSAAEVRHVGETETRGGLQRTWEDCTVGGELLLEVADVLGLAEIYTEDEMDADKHDGEWDQGARCDMWGRFLGEGFVVQAGKKRQRAGDDPVQQFEVTHA-PWCKEGTPDNPLFVLRREGFHLNNENLAFFSAPVTFYNDAFNCFGMGNKHSVGGGYFGWPWRTQAVQRLKRQTHVGTLASTGA 561          
BLAST of mRNA_A-nodosum_M_contig995.9.2 vs. uniprot
Match: D7FUZ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ8_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 5.800e-22
Identity = 64/177 (36.16%), Postives = 90/177 (50.85%), Query Frame = 0
Query:    1 MEEMYANPGGHLARESGSSGTGIGSDHVFQGPTREVGDLLRTNMNGALPRRSALLGYDGVVLR-SGKKAYIGETVMVDFRSENTASVRQVPRRLLALFWDMASSALVATVRMFHPVGEVGGNGDEKNHFGHHRMWEETGASAEIEVEPNALLHFCEILTPEEIDAGVHNEPWIHGER 176
            + E Y  P G L R   ++   + SDHV   PT++VG++  TNMNG L R S  +G DG+     G+K +I +  +       T        RLL LFWD+ S  +VATVRMF    EV   G+ +   G  R WE+     E+ +E + +L   EI T +E+DA  H+  W  G R
Sbjct:   72 LSEAY--PAGKLLRGEEAAMNSLTSDHVNCVPTKQVGNVRETNMNGTLSRTSPFMGIDGIKGSVCGRKVFIHDVCICAVGGTPTVC------RLLELFWDVESRQVVATVRMFRSAAEVRHVGETETRGGLLRTWEDCTVGGELLLEVDDVLGLAEIYTVDEMDADKHDGEWDQGAR 240          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig995.9.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JWC0_9PHAE1.220e-3932.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUZ8_ECTSI5.800e-2236.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig995contigA-nodosum_M_contig995:31909..33212 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig995.9.2mRNA_A-nodosum_M_contig995.9.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig995 30698..38167 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig995.9.2 ID=prot_A-nodosum_M_contig995.9.2|Name=mRNA_A-nodosum_M_contig995.9.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=297bp
MEEMYANPGGHLARESGSSGTGIGSDHVFQGPTREVGDLLRTNMNGALPR
RSALLGYDGVVLRSGKKAYIGETVMVDFRSENTASVRQVPRRLLALFWDM
ASSALVATVRMFHPVGEVGGNGDEKNHFGHHRMWEETGASAEIEVEPNAL
LHFCEILTPEEIDAGVHNEPWIHGERVFHGWTFVGEVFAESRRLRSNHSG
GSTDLRLQVLPGKPWEKRGSDEDNFVDMQRQGIFHNDAGMPYKSIPLSMY
IDAFRVYGWSNPTTEGATYIGMPSFSPALQRCRRHLYPITIAESGA*
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