prot_A-nodosum_M_contig99.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig99.17.1
Unique Nameprot_A-nodosum_M_contig99.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1448
Homology
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BLAST of mRNA_A-nodosum_M_contig99.17.1 vs. uniprot
Match: D7FU27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU27_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 2.290e-12
Identity = 77/200 (38.50%), Postives = 109/200 (54.50%), Query Frame = 0 
Query:  203 DCQTRDLLRDINDAATVDNGGGGEGQESSSPARVRSS-SFRANEALTMIVSSGRRPPE-----GSGGGGTNDGLRLPSVGRGPGGGKAGRDA--AAGMARLTSSVLLGMTEATAGGLDEALALIRKG-RSRCSEDGHGHFVVAMKLIAKDDEPATAAAAKIIKTTCRATGELVFVEMGDCPGGDLPKIVLTLLELLKRSN 393
            +  TRDLLR  +  ++ + GG G G++++   R  S+ +  A + LT + SS   P       GSGGGG     R  SVG    GG+ G+ A  AA    L S VL G+TE  A G++ ALAL R+G R+R  E   GH V++ +L++           +++ +    TGELVFVE+GDCP GDLP+ + T L  LK  N
Sbjct:   39 EATTRDLLR--SPPSSWNPGGDGRGRKAAQSPRSPSTWATSARDLLTGLTSSPSPPRPLRFSVGSGGGGFG---RRNSVG----GGRPGKGAVAAADGVLLASRVLAGVTEVHADGVEAALALFRRGLRNRRKE---GHVVISARLVSVGGSDKRVDKKRVLDSALE-TGELVFVELGDCPNGDLPQTLRTALAHLKVGN 225
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig99.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FU27_ECTSI2.290e-1238.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036961Kinesin motor domain superfamilyGENE3D3.40.850.10Kinesin motor domaincoord: 21..325
e-value: 3.5E-7
score: 31.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1245..1273
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..907
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 749..769
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1428..1447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1179..1193
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 581..619
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 787..810
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1052..1229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1202..1220
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..239
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1103..1153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1077..1096
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 875..907
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..813
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 28..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig99contigA-nodosum_M_contig99:140346..173269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig99.17.1mRNA_A-nodosum_M_contig99.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig99 140104..175360 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig99.17.1 ID=prot_A-nodosum_M_contig99.17.1|Name=mRNA_A-nodosum_M_contig99.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1448bp
MLVGQKIWRSFPGAGNDDGHPLDSQLPSEKITVRLRSAVAPEGLRAGEKL
GVWKGSRGEMVKMEVGVGDGGKQQDLVEYRVDRVLGPSAGDTEVYEVAAA
HLVDRAIRGGNGLLLLTGTPRSESAHSGRKLLAPPRAPDGLVPSALADLT
RQWRGETERYYRFRQPPEGLEEPEPAPAPAIVATGVSNFVVRLCVVEIRG
GIDCQTRDLLRDINDAATVDNGGGGEGQESSSPARVRSSSFRANEALTMI
VSSGRRPPEGSGGGGTNDGLRLPSVGRGPGGGKAGRDAAAGMARLTSSVL
LGMTEATAGGLDEALALIRKGRSRCSEDGHGHFVVAMKLIAKDDEPATAA
AAKIIKTTCRATGELVFVEMGDCPGGDLPKIVLTLLELLKRSNQVAASAY
QPPESSAGATAEQISLSATLHDSNSGRSSDNSLRALLESLAGSVTALGGF
PAQETATATVASSWKFGGRQRSSTSLNSVRGAAFSSQSQAEATKDVLLAV
SVVATLDAGGAFREENAALLEVLARSSRKRQKSWGSFKRMMKSIHSLTRR
SSQMKRDTVATTSAVRKNLLSVSSSESSRGLSSAPISTLTVEAAPDGVKD
KPQPSGGTDQPLNDAAAAVKTASSPVSPLFARAAASAGYLTEAATKEQSY
RFLDEEKVEREPSLAMGVSPSRKLPTVQVEPTGQASQEWMKIPHIASDPA
RGTEKERYSRRGLEEQTFATTLSIARLEEADRSDAARVSSACRANPHTDR
AVTKSRIFADRERPSDGGSERGEGGASVGTDGEASTNPRQDSEEGEIEEQ
VEEGRHHQDPIRQLLLLPADELAKRVLKAEESSSHWKTQHALAEKKLAEL
RAQLWPTKIGTIIGEAIPSPRAGRVGRDTRVDKRRGVSGANKPAGERHTR
SDENYRDRYQSFPPKAFPSGSGGMILGEGGSGAAPAYPRAHALFGGVGER
ARELVISPSRLTFEERRALFCPEVKEALAAMGLASLAVVNENVVAKEAAP
AFTERPLGSAVDRSPRASEAPLVVEGAAPDAGKRRSLRYRTIDSFRPKMI
KRANGQRFTFQGEDPAGDDTRHEHKTSASSGSQTLLDSSTGPSYEEPAHS
GQALVSVSASHLAPSAANQASPRTVRGNASSTSVTHPRAAISTSPQPARR
TGRLHTSPNPPRVVPPHTIPGDYDVDTQEVDSPCSSVFSPHIVSPPSFSR
PRAEGRADEVESDDLHWAEESESSSASCRPTWNAWDGIWEGRDSSPGWWR
QSPPAAGRSRFPDEGAGGGGSRAWPVGSDWVTREDLVSPMQTPPKPRFPP
VGLRSPPTAISRVVSSSASASPATVFEDIKSRLLEAACQLPDDIMSPDEA
AAAEAAAGALEATAALMSAVKTRDSTTTFLSRNLPGEVSWGRPSAAAYGL
RDQGWDGSTKSSALPPRFYSLPTILPPRPAPLPQVPEKRRETEMMEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036961Kinesin_motor_dom_sf
IPR027417P-loop_NTPase