prot_A-nodosum_M_contig97.53.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig97.53.1
Unique Nameprot_A-nodosum_M_contig97.53.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length61
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig97.53.1 vs. uniprot
Match: A0A6H5JPK1_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK1_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 4.200e-21
Identity = 45/61 (73.77%), Postives = 54/61 (88.52%), Query Frame = 0 
Query:    1 MAHVTNARAKESLAAWRNLPILKCWILIGERPTVANLKMMEMQSLLREKVRVTTGVLEQLN 61
            M HV NARAKESLAAW NL I+K W+L+GERPTVANLK+++MQSL+++ VRVT GVLEQLN
Sbjct:   81 MVHVQNARAKESLAAWHNLSIMKVWMLMGERPTVANLKLIDMQSLMQDAVRVTAGVLEQLN 141
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig97.53.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JPK1_9PHAE4.200e-2173.77Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig97contigA-nodosum_M_contig97:756174..756356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig97.53.1mRNA_A-nodosum_M_contig97.53.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig97 756174..756377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig97.53.1 ID=prot_A-nodosum_M_contig97.53.1|Name=mRNA_A-nodosum_M_contig97.53.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=61bp
MAHVTNARAKESLAAWRNLPILKCWILIGERPTVANLKMMEMQSLLREKV
RVTTGVLEQLN
back to top