prot_A-nodosum_M_contig963.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig963.4.1
Unique Nameprot_A-nodosum_M_contig963.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length990
Homology
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: D7FME2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME2_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 4.320e-60
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 0
Query:    1 MTPMSRKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKRTGIMDIE 113
            M  MSRKGKWT+EEEALTARIIHYFSLGVLQLP+GTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARF+ RLERNKEKRTGI+ IE
Sbjct:    4 MNAMSRKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFQARLERNKEKRTGILGIE 116          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A6H5L1T7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T7_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 5.780e-56
Identity = 149/193 (77.20%), Postives = 159/193 (82.38%), Query Frame = 0
Query:    1 MTPMSRKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKRTGIMDIEARLLGNRTLGGVNGVVDTNGLAFTNSSVS-TAFQTFGQA-----AAPGXXXXXXXXXXXXXXXXXXXXXXAWN-PMSQGY 186
            M  +SRKGKWT+EEEALTARIIHYFSLGVLQLP+GTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARF+ RLERNKEKRTGI+ IEARLLGNR        +  +G    +S V  +A   FGQ       A GXXXXXXXXXXXXXXXXXXXXXXAWN P+S GY
Sbjct:    4 MNAISRKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFQARLERNKEKRTGILGIEARLLGNRHPSIDAAAIGGDGAGGASSGVGGSAMHAFGQGEMVAQGAAGXXXXXXXXXXXXXXXXXXXXXXAWNIPLSPGY 196          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A836CQN8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQN8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.760e-37
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKRTGI 109
            R+GKW+ EEEA TARIIHYF+ GVLQLPEGTTLR +LA+KL CDPMRITKKFTG+ CLGKRVYHSCERT AT    +++ E+LA LE RF ++LER +++R  +
Sbjct:   18 RRGKWSPEEEAYTARIIHYFNTGVLQLPEGTTLRVFLAEKLRCDPMRITKKFTGSACLGKRVYHSCERTPATKAEIQESKEDLANLEQRFLSQLERRRDRRASL 121          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A835Z4F5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4F5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 5.900e-36
Identity = 66/90 (73.33%), Postives = 79/90 (87.78%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARF 95
            R+GKW++EEEA T RIIHYF+ GVLQLPEGTTLRAYLA+KL CDPMRITKKFTG++CLGKRVYHSCERT A+ +    + E+L++LEARF
Sbjct:    2 RRGKWSSEEEAYTERIIHYFNTGVLQLPEGTTLRAYLAKKLQCDPMRITKKFTGSSCLGKRVYHSCERTPASPDEITASKEDLSQLEARF 91          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A6V1Q146_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q146_HETAK)

HSP 1 Score: 145 bits (366), Expect = 1.450e-34
Identity = 70/112 (62.50%), Postives = 87/112 (77.68%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKRTGIMDIEARLL 117
            RKGKWT EEE  T++IIHYF+ G+LQLPEGTTLR+YLA+KL+CDPMRITKKFTG+ CLGKRVYH  +   AT+    QA++EL+ LE RF+ RLER K+K    +D E  +L
Sbjct:   98 RKGKWTVEEEEFTSKIIHYFNTGILQLPEGTTLRSYLAEKLNCDPMRITKKFTGSQCLGKRVYHQGDVVQATHAQVVQALDELSHLERRFKLRLEREKQKTRSDLDAETTVL 209          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A7S1UUW2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUW2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.750e-29
Identity = 65/95 (68.42%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLE 100
            RKGKWT EEE  T+RIIH+FS GVL LPEGTTLR+YLA+KL+CDPMRITKKF G +CLGKRVYH C+R+  T    + A  ELA LE RFR R+E
Sbjct:  200 RKGKWTVEEEEYTSRIIHHFSTGVLTLPEGTTLRSYLAEKLNCDPMRITKKFAGASCLGKRVYHLCDRSPGTAADIEMAKAELARLEQRFRLRVE 294          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A7S1XJQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJQ1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.670e-27
Identity = 58/101 (57.43%), Postives = 79/101 (78.22%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKR 106
            RKGKWT EEEA T R+IH F+ G+LQ+  GTTLR+YL++KL+CDPMRITKK+ G++C+GKR++  CERT    E  +Q+ +ELA+LEA FR +LE ++  R
Sbjct:   27 RKGKWTAEEEAYTERVIHDFNEGLLQVAAGTTLRSYLSEKLNCDPMRITKKYAGSSCIGKRIFAPCERTPENIERGRQSAKELADLEAAFRAKLESSRSSR 127          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A7S1BZD1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BZD1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.010e-26
Identity = 61/95 (64.21%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLE 100
            RKGKWT EEE  T+RIIHYFS G+L LPEGTTLR+YL++ L CDPMRITKKF G +CLGKRVY  C+R+ AT    + A +ELA LE RFR +++
Sbjct:  216 RKGKWTAEEEEFTSRIIHYFSTGLLTLPEGTTLRSYLSETLSCDPMRITKKFAGASCLGKRVYRLCDRSKATANDNEMAKKELAHLEQRFRAKVQ 310          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A7S1ZRG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRG3_9STRA)

HSP 1 Score: 122 bits (307), Expect = 1.230e-25
Identity = 59/94 (62.77%), Postives = 71/94 (75.53%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRL 99
            RKGKWT EEE  T++IIHYFS G+L LPEGTTLR++LA KL+CDPMRITKK+ G  CLGKR YH CER   T    ++A  EL +LE RF+ R+
Sbjct:  366 RKGKWTLEEEEYTSKIIHYFSRGLLTLPEGTTLRSFLADKLNCDPMRITKKYAGAACLGKRAYHLCERPQVTIADIERANAELRQLEHRFQLRV 459          
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Match: A0A7S2WH73_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WH73_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.470e-24
Identity = 60/112 (53.57%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    6 RKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLERNKEKRTGIMDIEARLL 117
            RKGKWT EEE   +R+I +F++G+L LPEGTTLRAYLA KL+CDPMRITKKFTG++CLGKRVY   + T    +    A ++L  LE RF  RL+R  +    ++D +AR +
Sbjct:   78 RKGKWTPEEEDFVSRLIEHFNMGLLMLPEGTTLRAYLADKLNCDPMRITKKFTGSDCLGKRVYQPRKVTNMAAQEMDVARQDLEHLERRFLLRLQRANDADACMLDFDARFV 189          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig963.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FME2_ECTSI4.320e-6092.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1T7_9PHAE5.780e-5677.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CQN8_9STRA1.760e-3767.31Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z4F5_9STRA5.900e-3673.33Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A6V1Q146_HETAK1.450e-3462.50Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1UUW2_9STRA3.750e-2968.42Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S1XJQ1_9STRA1.670e-2757.43Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S1BZD1_9STRA1.010e-2664.21Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1ZRG3_9STRA1.230e-2562.77Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A7S2WH73_9STRA1.470e-2453.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..358
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 937..951
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 563..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 663..678
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 460..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 318..966
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 738..752
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 887..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 597..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..705
NoneNo IPR availablePANTHERPTHR35213:SF3SUBFAMILY NOT NAMEDcoord: 6..107
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 6..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig963contigA-nodosum_M_contig963:117905..126345 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig963.4.1mRNA_A-nodosum_M_contig963.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig963 117819..127897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig963.4.1 ID=prot_A-nodosum_M_contig963.4.1|Name=mRNA_A-nodosum_M_contig963.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=990bp
MTPMSRKGKWTTEEEALTARIIHYFSLGVLQLPEGTTLRAYLAQKLDCDP
MRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFRNRLE
RNKEKRTGIMDIEARLLGNRTLGGVNGVVDTNGLAFTNSSVSTAFQTFGQ
AAAPGPGPGSMPPNANVAAAAAAAAAAAWNPMSQGYPMPPGYTVTAAHGL
YGRPAVSGMLPAGSSAMSGYGMPSIARAPPPAPVGGHPHHLTSAVLHSHQ
LQLQQFSRAPGVAGVPAPGQVSKAHMAGVTVSRVGQSTAMSMIASQAVTS
AAGCSAAIASNVERSIVTPSSGQQLPPAPLSTLPPPQSASSPPSPVGSSS
QAYLPSSPGQMHNPYWLYRQNHHPGGGEQGRGDYAEFAPSSRHGYPPSTA
QLGSPHLGMTTSMQHHQWIHQHQQRHGGGGAVPPNAGISPSQQQQQQQQS
RDHHQQENQQDQEQQQQSRQHLIPPSLNALKLSSAAPNEAVARTAPCSGS
GDGSSDGSSDGGSISTASPRVSRTSTASPNSSEAGCEEPAPAPPERGATS
ADAAAVVSAERPTVSDTMASPRELQQMYHKSKSGRRRHDRNKDEASSTVS
ISRSNTTGSSSSLGSTTVDGASSRGFFSMSGGSSAGGSRTGFGSDEQQSQ
INGKDDGAATSAAAGVSSVSSSSGCESGSSSEEHDKQASTVTTDDSQTSA
ATSRTDVDGAGGLLMGFIESLNKKHKIDQQQQQQQHLHQQHQDHHERLQR
QPRGKQPPPQQRPKPPSPHAFPRVRHKHAARMEMEARLASSGAGGNGNFC
GAKKMRVSSGADVKPSERSPKTCRGGGRVREAVAPPRLPRSSETVNAGIM
LHARPESRKRPRDQQGLVGIVTQQGRREDTDNSEERASSTGDGTSVSSEG
GNSEEGGYEEDGDGSSWGSPGRYNDASVSEADYGASDERSSSFEERGDNS
DGSMGEAVLATGSRRAHVAVAGEVPQERRRSLLVGPCPV*
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