prot_A-nodosum_M_contig958.35.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig958.35.2
Unique Nameprot_A-nodosum_M_contig958.35.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length446
Homology
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: D7FWI2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWI2_ECTSI)

HSP 1 Score: 333 bits (854), Expect = 2.510e-105
Identity = 255/445 (57.30%), Postives = 295/445 (66.29%), Query Frame = 0
Query:    1 MLDMIPESLVLPAKQVSEPSYASKYMKNKKDDAPQQSKKEESKKNKRARYAADNQKTVSERQQERAREKTQDGNDGEHGGEHED---------GSGAEVEEDGLEPEAIRDKTMDVTSMDALKRKIQDRISAMQQKRMAAEGGRRAKTSEKRSAEXXXXXXXXXXXXXXXXXXXXEGEKKHPSIAVASATGPEPRGAPRDSSRNSSKEPKAAGTHVSGPRAKPEAL---RPVAEPQLPPLPTIEDVGDIEFSGLRGVIGRSDGEKRRP--PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEK-TRGGVMKNGGGRGXXXRGSGAG 430
            MLDMIPE+LVL AK+V+E SYASKYMKNKK +AP+QSKKEESKKNKRARYAADNQKT+ E+QQERA+   +DG D + G + +          G  A  E+DGL+ E +R K+MDV SMDALK++I++RI   Q+KR AAEG RRAKT+      XXXXXXXXXXXXXXXXXXXX                              S E            AK EA     PVA+PQLPPLPT+EDVGDIEFSGLRGV+G   G + +   PKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT+ GKE A++EGW DAIR+AGG E+KDNP ALKKMIKRKE+EKAKSA  WD R++GQ+K     XXXX         G          A  GDA    G KR+RRAGFEGKK DFINKE+ ++ G    GGGRG    G G G
Sbjct:  131 MLDMIPENLVLRAKEVAESSYASKYMKNKKGEAPKQSKKEESKKNKRARYAADNQKTLLEKQQERAKA-GEDGGDADAGSDKDXXXXXXXXXGGLQAAAEQDGLQSEVLRGKSMDVASMDALKKRIEERIKVFQEKRTAAEGSRRAKTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------XXXSAEAXXXXXXXXXXGAKVEANGSHAPVAKPQLPPLPTVEDVGDIEFSGLRGVLGDGSGNRGKHGLPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTETGKEKAKEEGWADAIRVAGGAEIKDNPAALKKMIKRKEKEKAKSAAKWDERLSGQRKXXXXXXXXXEENLNRRKKGGPAVGETDKAASGGDAASGQGGKRQRRAGFEGKKQDFINKERPSKAGEQGGGGGRGGARGGRGRG 562          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S0SRE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRE0_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.110e-13
Identity = 51/118 (43.22%), Postives = 70/118 (59.32%), Query Frame = 0
Query:  228 LPTIEDVGDIEFSG--LRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT-KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRI 342
            L +  D  DIE +   +   +   D  K+ P   G PGSK KRLH +LA  E+K+QRL  L+Q+  EGKE  +QE WE AI+ A GE V  +P  +K  +K+ E+ KAKSA  W+ R+
Sbjct:  193 LDSTTDSTDIETAATDISYNLATGDSTKKLPKDFGKPGSKSKRLHSMLAEVEKKRQRLQDLKQSGPEGKEKLQQELWEGAIKSASGERVITDPKVIKNKLKKIEKNKAKSAKEWNARL 310          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A1Z5JT82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT82_FISSO)

HSP 1 Score: 74.7 bits (182), Expect = 5.910e-11
Identity = 60/181 (33.15%), Postives = 89/181 (49.17%), Query Frame = 0
Query:  232 EDVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEKTRG 411
            ED+  ++F  L G+            K     SK K L  +LA AE K+Q+L  L++ T+E K  A +  W D ++ A G+ VK +P  +KK++KRK  +KAKS   W  R+   K+++ +R             G       +      D  + +G KR  RAGFEGKK DF+N  K +G
Sbjct:  191 EDLAKLDFGRLAGLNTTETSNYLAANKALGNLSKTKNLKKMLADAEAKQQKLEQLKKGTEEEKAKAMEMQWSDTLKEADGQRVKSDPSKIKKVLKRKAAKKAKSQKAWKTRLEQVKEKKDERQTIRNHNLDARKKGGAIGANLSKKKIVKDGDQDSG-KRLSRAGFEGKKRDFLNSPKKKG 370          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: B5Y420_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y420_PHATC)

HSP 1 Score: 72.8 bits (177), Expect = 3.080e-10
Identity = 61/181 (33.70%), Postives = 92/181 (50.83%), Query Frame = 0
Query:  233 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRI-----AGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINK 406
            D+ +++F  L G+   +     +  K  A  SK K L  +LA AE K++R+  L+  K+   +  ARQ  W+D ++ A G+ VKD+P  LKK +KRKE +KAKS   W  R+     A Q +++ ++               +     A      DA E  G +R  RAGFEG+K DF+NK
Sbjct:  218 DLANLDFGRLAGLNSHTKEHYSKSNKALANLSKTKNLERMLADAEAKRERIEALKACKDESAQAEARQILWKDTLQEADGQRVKDDPMKLKKALKRKEVKKAKSKKAWKSRMENVSDAAQSRQKIRQHNLSARKAGGQSGANLSKKKIA------DAGEDGG-RRLSRAGFEGRKQDFLNK 391          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A448ZTA8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTA8_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 5.330e-10
Identity = 62/180 (34.44%), Postives = 89/180 (49.44%), Query Frame = 0
Query:  233 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEK----RRRRAGFEGKKNDFINK 406
            D+  ++F  L G+    +G      K     SK K L  +LA AE KK+RL  L+Q+  +E KE A    W D +R A GE VKD+P  +KK +KR+  +K KS+  W  R+   + +  +R             G       ++     +A E+ G+K    R  RAGFEGKK DF+NK
Sbjct:  172 DLAMVDFGRLSGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKQSDKQEDKEKAASIEWGDTLREATGERVKDDPAKIKKALKRRAAKKLKSSKAWKTRMESAQSKMDERQKIRNHNLTKRKLGGSAGANLSSKRIETEA-EADGKKKTGRRLSRAGFEGKKQDFLNK 350          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: K8YSR8_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YSR8_NANGC)

HSP 1 Score: 72.4 bits (176), Expect = 5.440e-10
Identity = 56/144 (38.89%), Postives = 80/144 (55.56%), Query Frame = 0
Query:  267 KRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIA----GQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINK 406
            K L GLL  AEEK++RL  L+ T+ GKE A    W+DA++ A GE++ DNP  LKK IK+KE+    S   W  R A     ++++QG+R             G V      + A + +  +S G  R+ RAGFEGK+ +F+NK
Sbjct:  328 KNLVGLLKKAEEKEKRLKELQATEGGKEEASALLWKDALKSAHGEKILDNPKLLKKAIKKKEKAXXXSKEKWGDRTAKIEAAEREKQGRREANLKKRKL----GGVEGCLAGSKAEKDNKEKSGG--RQGRAGFEGKRAEFLNK 465          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A1E7FHH0_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHH0_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.310e-9
Identity = 66/190 (34.74%), Postives = 89/190 (46.84%), Query Frame = 0
Query:  233 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQT--KEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAG-------------RGDATESAGEKRR-RRAGFEGKKNDFINK 406
            D+  ++F  L G+    +G      K     SK K L  LLA AE KKQRL  L+++   E KE A    W + I+ A GE VKD+P  +KK+++RK  +K KSA  W +R+   K+   +R             G        TGA               G  T+   + RR  RAGFEGKK DF+NK
Sbjct:  226 DLSQVDFGRLAGLNPIGNGNYTEVNKALKNLSKSKNLEKLLADAESKKQRLEELKKSGKAEDKEKADNIVWGNVIKEATGERVKDDPAKIKKVLQRKAAKKKKSAKAWKNRMDTTKQNMDERQNIRNHNLNQRKAGGQ------TGANLSSKRIELEGDDKNGGPTKQKNDGRRLSRAGFEGKKQDFLNK 409          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S4ATI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATI7_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 3.490e-9
Identity = 60/181 (33.15%), Postives = 87/181 (48.07%), Query Frame = 0
Query:  233 DVGDIEFSGLRGVIGRSDGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKE--GKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGA----GRGDATESAGEKRRRRAGFEGKKNDFINKE 407
            D+  ++F  L G+    +G      K     SK K L  +LA AE KK+RL  L+++ +   KE A    W  A++ A GE VKD+P  +KK +KRK  +K KS+  W  RI   + +  +R             G       ++        GD  +  G +R  RAGFEGKK DF+NK+
Sbjct:  264 DLAQVDFGRLAGLNPVGNGNYTEVNKALKNLSKSKNLEKMLADAESKKKRLEELKKSDKQTDKEKAANIEWGHALKEATGERVKDDPAKIKKALKRKAAKKLKSSKAWKTRIESTQSKMDERQKIRNHNLSKRKVGGSAGANLSSKRIEVEKEGDDKKKGG-RRLSRAGFEGKKQDFLNKK 443          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: A0A7S3KW68_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KW68_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 8.290e-8
Identity = 59/178 (33.15%), Postives = 85/178 (47.75%), Query Frame = 0
Query:  233 DVGDIEFSGLRGVIGRS-DGEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQ-TKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQGKRXXXXXXXXXXXXXGXVXXXXXATGAGRGDATESAGEKRRRRAGFEGKKNDFINKEK 408
            D+  ++F  L G+ G S      +  K     SK K LH +LA AE K+ +L  L+Q  +E    A++  W D  + A G+ +KD+P  LKK++KRK  +K KS   W  R A   K+   R             G       +    R D  E  G +R  RAGFEG+K +F+N +K
Sbjct:  192 DLAQVDFGRLAGLNGSSLQKNYEQSNKALQNLSKSKNLHKMLADAEAKRAKLEELKQGDEEAVAKAQKLLWSDTFKEADGQRIKDDPSKLKKVLKRKAAKKVKSQKAWQSRTAQVDKKAQDRQKIRQHNLQARKQGGAAGANLSKKEIRKD--EDPG-RRLSRAGFEGRKREFLNGDK 366          
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Match: R1GNS5_BOTPV (Putative 60s ribosome biogenesis protein rrp14 protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1GNS5_BOTPV)

HSP 1 Score: 64.3 bits (155), Expect = 2.190e-7
Identity = 39/75 (52.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:  273 LAAAEEKKQRLAGLRQTKEGKEVARQEGWEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKK 347
            L AAE+KKQRLAGL + K  +E+  ++ W +A + A GE+VKD+   LKK +KRKE++K KS N W  RIAG +K
Sbjct:  399 LEAAEKKKQRLAGLDEEKR-REIESKDLWLNAKKRAHGEKVKDDTNLLKKTLKRKEKQKKKSENEWTERIAGVQK 472          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig958.35.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FWI2_ECTSI2.510e-10557.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0SRE0_9STRA3.110e-1343.22Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A1Z5JT82_FISSO5.910e-1133.15Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
B5Y420_PHATC3.080e-1033.70Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A448ZTA8_9STRA5.330e-1034.44Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
K8YSR8_NANGC5.440e-1038.89Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1E7FHH0_9STRA1.310e-934.74Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S4ATI7_9STRA3.490e-933.15Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S3KW68_9STRA8.290e-833.15Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
R1GNS5_BOTPV2.190e-752.00Putative 60s ribosome biogenesis protein rrp14 pro... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029188Ribosomal RNA-processing protein 14, N-terminalPFAMPF15459RRP14coord: 1..50
e-value: 2.6E-8
score: 34.3
IPR029190Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domainPFAMPF04935SURF6coord: 135..364
e-value: 8.2E-28
score: 97.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 383..409
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..445
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..153
NoneNo IPR availablePANTHERPTHR14369:SF0SURFEIT LOCUS PROTEIN 6coord: 1..405
IPR007019Surfeit locus 6PANTHERPTHR14369SURFEIT LOCUS PROTEIN 6coord: 1..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig958contigA-nodosum_M_contig958:272511..279637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig958.35.2mRNA_A-nodosum_M_contig958.35.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig958 271990..280005 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig958.35.2 ID=prot_A-nodosum_M_contig958.35.2|Name=mRNA_A-nodosum_M_contig958.35.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=446bp
MLDMIPESLVLPAKQVSEPSYASKYMKNKKDDAPQQSKKEESKKNKRARY
AADNQKTVSERQQERAREKTQDGNDGEHGGEHEDGSGAEVEEDGLEPEAI
RDKTMDVTSMDALKRKIQDRISAMQQKRMAAEGGRRAKTSEKRSAERLVK
RESKRKGAKARKKGKDEGEKKHPSIAVASATGPEPRGAPRDSSRNSSKEP
KAAGTHVSGPRAKPEALRPVAEPQLPPLPTIEDVGDIEFSGLRGVIGRSD
GEKRRPPKVGAPGSKMKRLHGLLAAAEEKKQRLAGLRQTKEGKEVARQEG
WEDAIRIAGGEEVKDNPGALKKMIKRKEREKAKSANNWDHRIAGQKKEQG
KRQEKREENLKKRKMGGVAAATTATGAGRGDATESAGEKRRRRAGFEGKK
NDFINKEKTRGGVMKNGGGRGGGGRGSGAGKPMGGRGAVRDKAKG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029188Rrp14_N
IPR029190Rrp14/SURF6_C
IPR007019SURF6