mRNA_A-nodosum_M_contig953.14.2 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig953.14.2
Unique NamemRNA_A-nodosum_M_contig953.14.2
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: D7FIZ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ5_ECTSI)

HSP 1 Score: 444 bits (1143), Expect = 1.420e-152
Identity = 226/333 (67.87%), Postives = 269/333 (80.78%), Query Frame = 1
Query:    1 MEQRASLGFFMALVANRPVRPVAALNFLQFSGARQGRSMPGVALRVATSTPSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCRKGYDNPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGFFGI 999
            ME R+++G F++L  +   RP AALN    +    GR + G+       T +A  +  +   +VDVDANLLH DL++DI+ HIQ    +ASS GV QFVVPGSTVEDSR +L+LA RKPNVVF TAGVHPYHV+ CG+LE+AMA+IATLAA ++ RCVGECGLD++EGFP A+ QLPWFERQV+LAC+LKKPLFLHER AF  FSEVLRRYD SHGLPPCLVHCFTG+ EE+ AY+DMGFFVSVAGGICREK+G  LR AVK IPLDRLMVETDAPYLGF GCRKG+D PKKQNPNVPSALPAV++V A+CLGLPF++VA+AT +NSR FFG+
Sbjct:   25 MEHRSAIGLFLSLAVHLN-RPAAALN----TRLPIGRGVRGL------HTTAAADAGESSSYIVDVDANLLHADLSNDIDHHIQ----IASSVGVKQFVVPGSTVEDSRGSLELARRKPNVVFSTAGVHPYHVQGCGSLEDAMASIATLAATEEARCVGECGLDYSEGFPAAELQLPWFERQVELACKLKKPLFLHERAAFVDFSEVLRRYDASHGLPPCLVHCFTGSEEELTAYIDMGFFVSVAGGICREKSGAALRAAVKRIPLDRLMVETDAPYLGFSGCRKGHDKPKKQNPNVPSALPAVVRVLAECLGLPFEEVAQATLQNSRQFFGM 342          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A835Z870_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z870_9STRA)

HSP 1 Score: 309 bits (791), Expect = 1.180e-99
Identity = 155/272 (56.99%), Postives = 196/272 (72.06%), Query Frame = 1
Query:  187 LVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSH-GLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCRKGYDNPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGFFGI 999
            LVDVDANL H  LA+D  +HI  +  V    GV Q VVPGS + DS+AALDLA + P +++PTAG+HPY V+ CG LE AM+ +A L A     CVGECGLDF+EGFP  + QLP+FERQVQLA E +KPLFLHER A   F++VLR  + +  GLPPCLVHCFTGT  E++ YL MGF++ V G + ++ +G +LR  ++ +PLDRLMVETDAPYLGF GCRKG+  PK+Q PNVPSALP V+Q  AD +G+    VA  +  N+R FFG+
Sbjct:   50 LVDVDANLCHEALAADAAVHIDMARDV----GVRQMVVPGSDLADSKAALDLARKYPGILYPTAGIHPYCVKDCGELEPAMSTLAELLADPLFTCVGECGLDFSEGFPEPELQLPFFERQVQLAVETRKPLFLHERLASRPFTDVLRAANAAPPGLPPCLVHCFTGTGSELSVYLQMGFYIGVTGFLLKKPHGNVLRGCLQQVPLDRLMVETDAPYLGFPGCRKGHSQPKRQYPNVPSALPLVVQAVADAMGVSALDVAAHSTRNARKFFGM 317          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: K3WCX9_GLOUD (Uncharacterized protein n=2 Tax=Globisporangium ultimum TaxID=2052682 RepID=K3WCX9_GLOUD)

HSP 1 Score: 254 bits (649), Expect = 1.020e-78
Identity = 133/291 (45.70%), Postives = 192/291 (65.98%), Query Frame = 1
Query:  142 TSTPSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHG--LPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCRKGYD--NPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGFFGIT 1002
            TS+PS   +  T LDL D D NL H D+ +D+E+H+Q  +    +AGVT+ +VPG+T+E+S+AA+DL  + P  +FPTAGVHPYH  +    EE +A ++ LA  ++ R VGECGLD++  FP A  Q  WF+ Q+ LAC L+KPLFLHER A D F  ++++         PP +VHCFTG  +E+  Y+  GF++ + G IC++++G  LR  V+ IPL +L++ETDAPY+GF  CR+ Y+  +PKKQ PNVPSALP V++  A  LG    ++A  T  N+R F  ++
Sbjct:    5 TSSPSVIKNEET-LDLFDFDCNLTHDDMVADVEMHMQHGA----AAGVTEMLVPGATLEESQAAIDLCRKYPTQLFPTAGVHPYHALALPTPEE-LATLSDLAQLEECRAVGECGLDYSPSFPDAKLQQEWFKVQLDLACRLQKPLFLHERLAHDDFMALIKQCQQKFNDYFPPVVVHCFTGNEQELREYVRQGFYIGITGFICKKEHGASLRAMVQHIPLQKLVIETDAPYMGFPKCRR-YEPSHPKKQYPNVPSALPQVVEAIATALGKTPQEIALITKANARRFLRLS 288          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A024TGJ1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGJ1_9STRA)

HSP 1 Score: 247 bits (631), Expect = 1.050e-75
Identity = 131/276 (47.46%), Postives = 179/276 (64.86%), Query Frame = 1
Query:  181 LDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSH--GLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRD--AVKLIPLDRLMVETDAPYLGFKGCRKGYDNP--KKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            +DL D D N+ HP+     +  +Q + +V     VTQ +VPGST+E+S   L LA + P+ VFPTAGVHPY+       EE  A ++ LAA  ++  VGECGLD+++GFP  D QL WF  Q+ LA  L+KPLFLHER A + F + L    T H   LPP  VHCFTGT +E   Y+ MGF++ + G +C+E +G  L+   A  ++PLDRL+VETDAPY+GF GCR G+++   K+Q PNVP++LP V+Q  ADC+G+   +VAR T  N+R F
Sbjct:   44 VDLFDFDCNVTHPEFKGQEDALVQCARRVR----VTQMLVPGSTIEESHECLALARQHPSTVFPTAGVHPYNATKPFDAEE-FATLSVLAANTEIVAVGECGLDYSDGFPSPDLQLSWFGPQLSLAVSLQKPLFLHERLAHEPFLDAL----TPHLDNLPPACVHCFTGTTDEAQVYIKMGFYIGITGFVCKEPHGAALQSMLAAGILPLDRLVVETDAPYMGFPGCR-GFESTGGKRQFPNVPTSLPKVVQAIADCVGVSPAEVARITTRNARQF 309          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: T0Q697_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q697_SAPDV)

HSP 1 Score: 248 bits (632), Expect = 1.110e-75
Identity = 142/291 (48.80%), Postives = 180/291 (61.86%), Query Frame = 1
Query:  145 STPSAPTSA-----ATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKL---LRDAVKLIPLDRLMVETDAPYLGFKGCRK-GYDNPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            STP AP S        D+DL D D NL HPD     E    A    A  A VTQ +VPG+T+E+S+  L+LA   P V+FPTAGVHPY+  S      A A ++ LA   ++  VGECGLD++ GFP  + QL WF  Q+ LAC+L+KPLFLHER A + F   L   + +  LPP +VHCFTGT  E A Y+ MG ++ V G +C+     L   LRD V  +PLDRL+VETDAPY+GF  CRK    +PKKQ PNV +ALP+V++  A+CLGLP   VA AT  N+R F
Sbjct:   40 STPVAPVSKLPAWLTLDVDLFDFDCNLTHPDF----EGQAPALIAEAKEARVTQMLVPGATLEESQQCLELARLYPTVLFPTAGVHPYNATSAFD-PAAFATLSALAKQPEMVAVGECGLDYSPGFPSPELQLEWFLPQLDLACDLQKPLFLHERLAHEPFVAALT--ERAAKLPPTVVHCFTGTAAEAATYVSMGLYIGVTGFLCKSHGANLQSLLRDGV--VPLDRLVVETDAPYMGFPHCRKLAATHPKKQYPNVATALPSVVEALAECLGLPAKDVAAATTYNARKF 321          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A1V9YL96_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YL96_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.530e-75
Identity = 138/286 (48.25%), Postives = 181/286 (63.29%), Query Frame = 1
Query:  145 STPSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKL---LRDAVKLIPLDRLMVETDAPYLGFKGCRK-GYDNPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            S+P+ P   + ++DL D D NL HPD        I +    A SA VTQ +VPG+T+E+S+A + L  + P  +FPTAGVHPY+  +      A A ++ LAAA DV  VGECGLDF+ GFP  + QL WF  Q++LAC L+KPLFLHER A   F E L    T   LPP +VHCFTGT  E   Y+ +GF++ + G IC+    +L   LRD    +PLDRL+VETDAPY+GF  CR+    +PK+Q+PNVP+ALP V++  A CL LP  +VA AT  N+R F
Sbjct:   35 SSPAYPEWLSDEVDLFDFDCNLTHPDFEGQAPELITS----AQSARVTQMLVPGATLEESQACVALCRQHPKALFPTAGVHPYNA-TMPFDPTAFATLSELAAAPDVVAVGECGLDFSPGFPSPELQLAWFVPQLELACALQKPLFLHERLAHAPFLEAL----TGRSLPPAVVHCFTGTAAEARVYVALGFYIGITGFICKPHGAELQALLRDGA--VPLDRLVVETDAPYMGFPRCRQLEPTHPKRQSPNVPTALPRVVEALAACLDLPVREVAAATTYNARKF 309          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A485LL64_9STRA (Aste57867_22335 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LL64_9STRA)

HSP 1 Score: 246 bits (628), Expect = 2.380e-75
Identity = 134/288 (46.53%), Postives = 177/288 (61.46%), Query Frame = 1
Query:  139 ATSTPSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKL---LRDAVKLIPLDRLMVETDAPYLGFKGCRKGYDNP-KKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            A+ T + P      +DL D D NL HP+     +  I+++  V     VTQ +VPG+T+E+S+  L LA + P   FPTAGVHPY+       +E    +ATLA   ++  VGECGLD++EGFP  + QL WF  Q+ LA  L+KPLFLHER A   F + LR ++ +  LPP  VHCFTGT +E   YL MGF++ + G +C+     L   L+D    +PLDRL+VETDAPY+GF  CR       K+Q PNVP++LP V+QV ADCLGLP   VARAT  N+R F
Sbjct:   24 ASKTEALPEWLDASVDLFDFDCNLTHPEFIGQADALIESARIVR----VTQMLVPGATIEESQQCLALARKHPETAFPTAGVHPYNATKAFDTDE-FQVLATLAGESEIVAVGECGLDYSEGFPSPEHQLAWFLPQLSLAVTLQKPLFLHERLAHAPFVDALRLHEAN--LPPACVHCFTGTADEAKVYLSMGFYIGITGFVCKPHGADLQTMLKDGT--LPLDRLVVETDAPYMGFPNCRAFESTAAKRQYPNVPTSLPKVVQVIADCLGLPPADVARATTRNARRF 302          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: W4GIL0_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIL0_9STRA)

HSP 1 Score: 243 bits (621), Expect = 3.520e-74
Identity = 128/273 (46.89%), Postives = 176/273 (64.47%), Query Frame = 1
Query:  181 LDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRDAVK--LIPLDRLMVETDAPYLGFKGCRKGYDN-PKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            +DL D D N+ HP+     +  I+++  +     VTQ +VPGST+E+S+  L LA + P  VFPTAGVHPY+        +  A ++++AA   V  VGECGLD++EGFP  D QL WF  Q+ LA  L+KPLFLHER A  AF E L  +  +  LPP  VHCFTGT +E A Y+ MGF++ + G +C++ +G  L+  +   ++PLDRL+VETDAPY+GF GCR    + PK+Q PNVP++LP V+Q  A CLG+   +VAR T  N+R F
Sbjct:   46 VDLFDFDCNVTHPEFTGQADALIESARHLR----VTQMLVPGSTIEESQQCLALARQHPTTVFPTAGVHPYNATKPFDPSD-FAILSSMAADPTVVAVGECGLDYSEGFPSPDLQLEWFGPQLSLAVSLQKPLFLHERLAHKAFVEALTPHIPT--LPPACVHCFTGTADEAAVYIGMGFYIGITGFVCKQPHGAALQSMLSSGVLPLDRLVVETDAPYMGFPGCRSFEPSGPKRQFPNVPTSLPHVVQAIAGCLGVSAAEVARVTTRNARQF 311          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A5D6YB90_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB90_9STRA)

HSP 1 Score: 243 bits (619), Expect = 1.640e-73
Identity = 128/275 (46.55%), Postives = 176/275 (64.00%), Query Frame = 1
Query:  187 LVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVLRRYDTSHG--LPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICREKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCR-KGYDNPKKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGFFGIT 1002
            L D D NL H DL     L + A  + A+ AGV++ +VPG+T+++SRAAL L+   P+ +F TAGVHPY+  +     E +  +  LA   + R VGECGLD++ GFPPA+ Q  WF  Q++LAC L++PLFLHER A D F   +       G   PP +VHCFTGT  E+ AY+  GF++ V G +CR++ G  LR+ ++L+PL RL++ETDAPY+GF  CR +   +PKKQ PNVPSALP V +  A  LGL   +VA AT  N+R F  ++
Sbjct:   72 LFDFDCNLTHDDLTP---LALDAMVRAAA-AGVSEMLVPGATLDESRAALTLSRDHPHTLFATAGVHPYNAHAAPETHE-LEELEALAVLPECRAVGECGLDYSPGFPPAEPQREWFRAQLELACRLRQPLFLHERLAHDDFVATVASCQARFGDAFPPAVVHCFTGTERELRAYVARGFYIGVTGFVCRKELGAPLREMLRLVPLQRLVIETDAPYMGFPKCRGREPTDPKKQYPNVPSALPLVAETVAAALGLTAQEVATATRANARRFLRLS 341          
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Match: A0A662WGG9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WGG9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.130e-71
Identity = 132/294 (44.90%), Postives = 183/294 (62.24%), Query Frame = 1
Query:  130 LRVATSTPSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVVPGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLAAAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGAFDAFSEVL----RRYDTSHGLPPCLVHCFTGTPEEVAAYLDMG--FFVSVAGGICREKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCRKGYDNP-KKQNPNVPSALPAVIQVAADCLGLPFDQVARATAENSRGF 990
            L+ +TS     T     L+L D D NL H DL  D+     A    A+S GVT+ +VPGST+E+S+ A++L  + P  +FPTAGVHPYH  +    EE +A +  L    +VR VGECGLD++ GFP  + Q  WF  Q+ LAC L+KPLFLHER A + F +++    +++D     PP +VHCFTG   E+ AYL  G  +++ V G IC++++G  LR+ V+ +PLDRL++ETDAPY+GF  CR+   N  KKQ PNVPSALP V+Q  A  LG    ++ + T  N+R F
Sbjct:   45 LKNSTSMKPKATDTPPLLELFDFDCNLTHDDLKGDVA----AVMTQAASVGVTEMLVPGSTLEESQRAIELCRQYPTQLFPTAGVHPYHALASPTTEE-LATLRDLLELGEVRAVGECGLDYSPGFPAPELQKKWFVEQLALACRLRKPLFLHERLAHEDFLKLVDDATKQFDGY--FPPAVVHCFTGNERELQAYLARGDDWYIGVTGFICKKQHGAALREMVRHVPLDRLVLETDAPYMGFPKCRRDEPNDRKKQYPNVPSALPQVVQAVAAALGRSPQEIGKITKANARRF 331          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig953.14.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIZ5_ECTSI1.420e-15267.87Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z870_9STRA1.180e-9956.99Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3WCX9_GLOUD1.020e-7845.70Uncharacterized protein n=2 Tax=Globisporangium ul... [more]
A0A024TGJ1_9STRA1.050e-7547.46Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T0Q697_SAPDV1.110e-7548.80Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1V9YL96_9STRA1.530e-7548.25Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A485LL64_9STRA2.380e-7546.53Aste57867_22335 protein n=1 Tax=Aphanomyces stella... [more]
W4GIL0_9STRA3.520e-7446.89Uncharacterized protein n=8 Tax=Aphanomyces astaci... [more]
A0A5D6YB90_9STRA1.640e-7346.55Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A662WGG9_9STRA1.130e-7144.90Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig953contigA-nodosum_M_contig953:61086..78556 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FIZ5
PFAMsTatD_DNase
Model size1276
Max annot lvl2759|Eukaryota
KEGG koko:K03424
Hectar predicted targeting categorymitochondrion
Exons9
Evalue6.83e-155
EggNOG OGsCOG0084@1|root,KOG3020@2759|Eukaryota
Ec32 ortholog descriptionTatD family
Ec32 orthologEc-07_005020.1
Descriptionhydrolase activity, acting on ester bonds
Cds size1020
COG categoryL
BRITEko00000,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig953.14.2prot_A-nodosum_M_contig953.14.2Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig953 61086..78300 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870452.3074849-CDS-A-nodosum_M_contig953:61085..613491680870452.3074849-CDS-A-nodosum_M_contig953:61085..61349Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 61086..61349 +
1680870452.323485-CDS-A-nodosum_M_contig953:69485..695811680870452.323485-CDS-A-nodosum_M_contig953:69485..69581Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 69486..69581 +
1680870452.3482718-CDS-A-nodosum_M_contig953:69816..699191680870452.3482718-CDS-A-nodosum_M_contig953:69816..69919Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 69817..69919 +
1680870452.361524-CDS-A-nodosum_M_contig953:70230..703311680870452.361524-CDS-A-nodosum_M_contig953:70230..70331Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 70231..70331 +
1680870452.3753083-CDS-A-nodosum_M_contig953:70827..708811680870452.3753083-CDS-A-nodosum_M_contig953:70827..70881Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 70828..70881 +
1680870452.386661-CDS-A-nodosum_M_contig953:71199..712711680870452.386661-CDS-A-nodosum_M_contig953:71199..71271Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 71200..71271 +
1680870452.3981252-CDS-A-nodosum_M_contig953:71731..718211680870452.3981252-CDS-A-nodosum_M_contig953:71731..71821Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 71732..71821 +
1680870452.4154792-CDS-A-nodosum_M_contig953:72578..726771680870452.4154792-CDS-A-nodosum_M_contig953:72578..72677Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 72579..72677 +
1680870452.4311788-CDS-A-nodosum_M_contig953:78159..783001680870452.4311788-CDS-A-nodosum_M_contig953:78159..78300Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig953 78160..78300 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870452.4437683-UTR-A-nodosum_M_contig953:78300..785561680870452.4437683-UTR-A-nodosum_M_contig953:78300..78556Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig953 78301..78556 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig953.14.2

>prot_A-nodosum_M_contig953.14.2 ID=prot_A-nodosum_M_contig953.14.2|Name=mRNA_A-nodosum_M_contig953.14.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=340bp
MEQRASLGFFMALVANRPVRPVAALNFLQFSGARQGRSMPGVALRVATST
PSAPTSAATDLDLVDVDANLLHPDLASDIELHIQASSKVASSAGVTQFVV
PGSTVEDSRAALDLANRKPNVVFPTAGVHPYHVESCGALEEAMAAIATLA
AAKDVRCVGECGLDFTEGFPPADSQLPWFERQVQLACELKKPLFLHERGA
FDAFSEVLRRYDTSHGLPPCLVHCFTGTPEEVAAYLDMGFFVSVAGGICR
EKNGKLLRDAVKLIPLDRLMVETDAPYLGFKGCRKGYDNPKKQNPNVPSA
LPAVIQVAADCLGLPFDQVARATAENSRGFFGITERSAS*
back to top

mRNA from alignment at A-nodosum_M_contig953:61086..78556+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig953.14.2 ID=mRNA_A-nodosum_M_contig953.14.2|Name=mRNA_A-nodosum_M_contig953.14.2|organism=Ascophyllum nodosum dioecious|type=mRNA|length=17471bp|location=Sequence derived from alignment at A-nodosum_M_contig953:61086..78556+ (Ascophyllum nodosum dioecious)
ATGGAGCAACGTGCGAGTTTGGGCTTTTTCATGGCGCTGGTGGCTAATCG ACCTGTTCGGCCTGTAGCAGCGCTCAACTTCCTTCAGTTTTCTGGAGCGC GCCAAGGTCGGAGCATGCCAGGTGTGGCTCTGAGGGTAGCCACGTCTACC CCCTCCGCCCCTACTTCAGCGGCCACGGATCTTGACCTTGTAGACGTTGA TGCCAACCTCTTGCATCCGGACCTCGCGAGCGACATTGAGCTCCATATAC AGGCGAGTAGCAAAGTGCCACAATTATCAAATGAATGGTTGACCGGGTGT TACGATAATTAGCACTGCTGAACCAGGCGACGTGAAGGAGCAGCAGCATC GCGAGAGATGACAACACACAACACACACACCGTACCTCTTTCATTTAATC ATCTCTTCTATGATCACATTGCTGTGTGTGTGTGTTCACCATACCTGGTA TGCGACTAAACCCTGACTGCTTTCATAAACATGCTCAGCAGGATTCGAAG CCGGTCCTACCGTCGACGCCAGTGTGATAAGGTTACTATTACACTACAGG GCAAAAGTCAATTGACAATCACACAATGCCCAACGGGTGGAGAACGATTA TTAAATCGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGA ATGGCTGAATCCTTCTCGCGAGAAAAATAAAGGCACTAGTTTTAATATGT ACACCGCAGAAAGAAGGTGGATGAGAAATCCTGTGTGACCTTCCTCCTGT GTGACCCCGGCTGGTACGTCCAACGAACTTGATGTCCAGAATGAATGGGA AGAAAACACACACACACTCGGCAATCAGTTCTTATAACATACATCTATCA TCTACACAGTTGTATTCTCGGTGTATATGCTTCAAACAGTACCCACTATT GTACAGTACTGCCCTGGTTGCCTCCCGGTCGGGGTGGACCCAAAGCGTGG AAGTGAGGAGACGTTAAGAAGTCCAAGCGTGCTGCGACCAGCTAACGGCA TATCCGATGTCGTTGGTGGTGCACTGCCAGTTGAATCCACAAGTACCCTC AACTCCCGCCTGTTATCACCGTTCGTACCAACGGTCATGGCATATTCCGA TGTCGTTGGTGGTGAACAAAAAACGAACGGTAACCAGCCAAACACAAGCC ACACCGGCGTACAATCCGATGTCGTTGGTGGTGGCACAAGCCACAACCAA CGGTCCGTACCGCAGCGGAAAGTGGGAGGGAGGAGAGGAGCCTATTAGTA AGCACCAGATTCGCTCCCGGAACGGAAGATGGGCGGGGTGACGCGGGGTG GGACGGCTGAACCCGCGTCGCGAGACCAAAATACAAAGCGCGACGCGGGA GATTTCTGAGGGAAAAACTGATGTCTGACCACGGTCTGTTTTCTTCCTAC GAGGGCCAACAAGGAGCGGCGAATGGGCAAGATTCGTGGGGCTTTTTCAG GAATGCACAGGGCTTTGGACGGCTGGATCCTGGCTCTCGCGTCGGCTTCA CCAGCTCAAGGCCTCCACCACCATGGACCTGGGTATTCCAATTTTCCAAT TTTTCTGTATGGTGTGTGTGGCCTTGAGAAACTTGGGCTTGTTGATCAAA ACTGATTAGAGCATGATTTGTCCGCGTTGTTGCTGAGAGCGCTGGCCGTG GGTAGGCGACAACAAGCCGAGTCGATCGAGGTTGCTCTCGATATGGAGTA AGGAGGTTGGATGAACCGTTTTGACAGTGGTCGATGCCATTGCTTATAAA GTGTCGCATAACTTGTCTTCGTGTAACCCTCCGAGAGCTAGAAAACTTCT TGTGTCATTTTTTATGACTTTGTTGAATGGGGGCAGCACATCAGACAGTC TTCTCTGTAGATTGTACTGAGATATTAGCAGCACTCCAGACAAAAGAAAC TGTAGTTTGTACCCAAAGACATCGTCTTGACGCCGACAAGTTTCCGATGT TCTCGGTTGGTTGGACCTGGCGAGGATTTTGTCGCGATTTAAATCCCTGT TAGTCTGAGTAGCGGGTTGTCGCCATGATGTGACCCGTTGACCCTCGTAC CTCTTTGTGACCAAAAGCAGGATTTGCATTTGATAGTGCCGCTCGTCGCC CGAGTGGTCTAGTAGGTAAGCTGCACATCTGCTAGTACGGAAGTCGTGAG TTCGATTCTTACCGAAGTAGGATTTGTGTTCTTTCTTTCGTAACGGAAAG CGTGGGAACGTTAGTAAGTAAAATTCAACCATTGGTTGACGAGTTGTAAG AGTGCTGAACTTGCATCGCGATAAAAAAATTGTAAGGCGTGAACCGGGGA GAGATGGGAAGATCCTTTGTGACCACAGGCAGGATGGTAATGATGAGGTC GATCGGCTATAAGTGAGATTAAAGAAAAAAAAAAGGTCTAAGACTGATTC GTTGTGTCACCGAAGTTCTTCAGTTGCAAGGGCAATACACTGAATACATG AATCAACACTTTTCTTTAAACATGAAGAGGTTTAATCTTTGCAGCCTATG ATCCCACCTAAACGGTTCGACATTTTTCGCCCCCTGACTGGGGGATGCTC AGAAGGTCTAGATGCGTTCAGATTTTTCTCTAAAAAACATTGTACTTGTA TGATCTCAACAAATCATTGACCGCTTCTCAAGTATTCAAATGTGTATAGT TACAAAAAAGGTTAGGGTCAGAGCGCTTTCTGTTTTTGGTGTACCCACAT GGCGATTAGTGTAAGTGTACACTCCACGATATTATGCTATTGACCCAATA CGACTGTCATCGGGGAATCGGATGGGGAATTTTTCCTCTACCAAGTACTG TACACCGCCTCCGATATAATCTGTATGACATACAGTATGTACAAGCATAT GATATGTCCAAGCCTCCGATACTTTCAACGTGCCCACTTGATATCAGTAG TGGGTCTGGGACAAGAGAGGTGCACATTAATTGGATCCATGGCGACCTGC TAGGGCAGCACCGGTTACTGGAACTACCTTGAGGACTACTCGCCCTGTGC CGGCGGACTCTCGGCGGTGAACGCCATCGGTACGCAATTGTGTGATACGA TAAACTCGAGACTGACCCGATGGCGTATGGCGGTCTAGATAAATAAATGG GCGCCGCTTCGGAAATCGGGAGGAATTGCGTGAGTAAGCACCAGATTCAG CCTGAGTGTGGAGAATGAGCAGGCTGACGCGGGACGAGACGGCCGAACCA TTCTCGCGAGCCCAAATTCTCAGGCGCGAACGAGGACATGGAAATGTCAT TTTCCCAGTTCAGCTGACCACGAGCAGGATTGGCAACCATACCCGGTTGA TCCATACTGTGTTGAAAGTGCTGACCATACATACAGCGTAGACTATGTGT TTATGTCCTTCACATTAACTGATCGGACCTCAACCATTCTGTACCCAACA ATATACGCTGTTGCCAATCCGGTATATGGTCTGCTGGACAGGACCAATTC CCGCCCCCGCTCGCGCCTGAGTTTTTGGTCTCGTGAGGAGGGTTCGGCTC TCCCAACCCGCGTCGCCTCGCCCATCTTACGCGCCCGAGGCGAGATGACT TTGGTGCTTACTCACGGGCACCTCTTCTTCCTCCCGCTTAGATACTATAG ATACTATAGATACTATAGATACTATATATACTGTATACTATGTACTATAT AGACGATAGACGATAGGCGATACTATATAGCCGATAGACGATAAAGACGG TGCAGCAGCAGTTTGTTTGCCTTTACCGTTGGTTCGAACGGTTCGGCGCG TGGGTTGCCGATGGTGCGCCGTAAACGCCATCGTGTGCGCTTCTAGTTGG ATCAGGTCACACGAGCAGGGTCTCGTGGGAGCTTTCATTTCCTCGTGGCC ACCAACCCCCAATTGGCCTCCTCAGAGTTTGGTCTCGCCCCGGCCGGGAG GCGATCTCATGCTGGGTAGGTAATAGCCGAGATGTTCCCAACTAAACGTT TCGACGCAATTCCCTCGAACACTTGTTCGAAGAAAAGTCTGAACGTATCT AAACCTACCTTATTACAGCTCAGAGGGGGGGAAATTGTCAAAACGTCACT AACTAGGTGGGAACATAGGTCTATTAATAGGCTGTAATGTAATGTAAGGT AAGGACAAAAAATCTTGATGGCATTTGATGGGGTTCGGACACTCGTCGCC CAAGTGGAGTAGTGGTAACCTCGCAGATCACTATTAATCTTAATATTACT ATTAATCTTAATAGTGATCTGCGAGGTAGAGGTAGTGAGCTCGATTCTTG ACATAGTGATTTATTATGGCTATTCCGTGGCGGAAAGCGCGAGAACGCGA GTATGTAAAATCCAACCATGACTTGACTTGATTTGACTTGACGAGGTGTG CCAGGTAAGAGTGATGAACTATTGATAGCATGGCATGGCATGACTTGACG AGGTGTAAGAGTGCTGAACTATTGATAGCATCGCATGGCATGGCTTGACG AGGTGTAAGCGTACTGAATTACCATCGCGATAGAATTTGGTAGGCGAAAA CCGGGGAAGAAGTGAAAATCCTTATTAATAGTGACCACAGGCATTAACAT TAACATCAGCATTAACACTAATAGGATGGCAACTTTGCAGTATGAATGTA TGTACGTATGGTCTTCACATATAGCCAGAGAAGAGATCAACCGGATAAGG TTGCCAATCTTGCTCGTGGTCAGCTGAACAGGGAAAAATGAATATTTCCC CGTCCCCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTTCGGCCGT CCCGTCCCGCGTAAGCCTGCTCATTCTCCACATCCAGGCTGAATCTGGTG CTTACTCACGGGGTCCCTCCCGAATTCCGCGACGGCGTCCATTTATTTAT ATCGCCATACGCCATTGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTC CGTACCGATGGCGTTCACTGCCGAGAGTTCGCCGGCACAGGGCGAGTAGT CTTCAAGGTGGTTCCAGTAACGGGTGTTGCTTTTGCAGGTCACCATGAAC CAATCAATGTGCGCCTCCCTTTTACATCCACTATTGGTATCCAATGGGCA TGTGCTATACAGAAATTATCGGAAGCTATCTAAGGATCTATCTTCCCATC TCTTCCCGGTTCTCGCCTTTCGAATTTTAATCGCGATGCAAGTTCAGGCA CTTTTGCAACTCGTCAACTAATGGTTGAATTTTACTTACTCACGTTCTCA CGCTTCCCGCCACGGAATAGCCACAATACAAAACAAATCCTGCTTTGACT AGAATCGAAATCACGACTTCCGCACTAACGGGTATGCGAGGTCACCACTA GACCACATTGCAATAGGTCAAGAGGCGGGATTGGTAACTTAGCACGTTGC CCATCGCCTGTAAGTAAGATACAAACAAACAAACAACATTGTAGCAGCAT AGGGTCAACAGTATAATATCGGGGAGAAACCCACCGTTATGCTATACACT TGCTTAGGTAATCACCGTGCAAGGACACTATAATAAAACAGAGGCAAAAT AATGAAACTCATACAGAGTAAATACGTTATACTCAATATTGGGGTTGGTA CTATTATCGAGTTCAAGTATTTTTGAATCGAAGTCGATTGTAGTATGTAC TCTACTATTCTATTATATTTTTATATCGTAGGGTGTTAATAGCCAACACT ATAACGCTAAAGTATCGGGTATCAAGTGTCACAAGGTTAAGATGGGGACA TAGTCTAGTCATGGTCTGCAAAGACAAAAGGTCTTCATGGGATTTATTTG GGTTATGTTCCTCGATGGTATGACATCGGGGAGAAAATCTACTGTTGCAC TATAGGCTTACATGAACGCCATTCAATTACATCAAACCAGAGGCACCGAC CAGTACAGTACACAGTACACCCTGAACGAAGATACAAAATGTTGGCTTTG CCTCGTGTTCAAGTTAAGGTGAATCGGAGTCGATCGTAGGATATACAGTA TAGTCACATAGGGTCAATACTACAATAGGGTATCGAGGTCGATTGTAGGA CGGACAAGTCGCAAAGGGTCAATACTATTATATATTAATAACATACCTGG TATTTAGGAGAGTGAAGGTGGGAACTTAGTCTGCTAGTAGCCGGTCGCCC CGGTGGTTCAGTTGATAACCTCGAAACCGTCTGACGTTGGGACGTGAGTT CGAATCTCGGTGTCGTCGCACGAACTGGGATTTCTCCTGACAAAATATAT ATATATATGCCCAACAAATGTAGAACGATTAAATCGTTAGTACACAAAAT TCGGCTTGACGGTCGTCGAGGGAAATAAATGGCTGAATCCTTCTCGAGAA AAATTAAGGCAAGCACCTCAGAAAAAAGGTGGAGAAATTCTGTGTGACCT TCCTCCAGTGTGACCCCGGCTGGTACGTCCATAAACCTGACGTCCAGAAT AAATGGGATGACAACAAAAACACACACAAAGACAAAAGGTCTTCATGGGA TTTAATTGGGTTCCCAATGACATAACATCGGGGGAACACTTACCGTTATG TACTTATATAAAACCATTCAGAGACACCAAACTAGAGGCACCAGTACGCG CTAAAGGAAGATACAAGTCAGTTATGTTATGTTACGTTAAGTTATACTGT TATATTATATTGGGTTTGCTATTATTATCGGGTGCACGTATTGATGAATC GTGAATCGTGAATCGTGAATCGTGAATCCAAGTGGATCGTAGGGTATACG GTATAGTCAAAAAGGGTCAATACAATAATGTTAATATTGTACTGTAATTC GACTTCACGGTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAA AAATCAAGGCACGCACCGCAGAAGGAAGGTGGATTAAAAATCCTGTGTGA CCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACGAACTTGATGTCCA GAATGGATGGGAAGAAAACACACACACACACACCATAATATCAGAAATAT ACCTCTCTTCCTGATTATGATCTTACTCGTTGTCACCATGTGGGGACACA TGACCATAACCATACATCATTATTATTATTCTTCAGAGAGTCTTCTCTGT AGCTTGTAATTCAGATTTCTGAAACATTGGCAGCACTCCAGACAGTAAAA GCTCTACTGTACTGTACTGTAGTTCGTACCCAAAGACATTGTCTTGACGC CGATACGTTTCCGATGTTCTAGGTTGGTTGGAACTGGCAAGGGTTGTGTC ACGATTTGGATCCCTGATGGTCTTTGTAGCGGGTTGTCATCACGATGTGA CCCGTTGACCTTCGTACCTCTTGGTGACCACGAGCGGGATTGGCATTTGA TAGGTCTATTACTGTTGTGTCGCCGTAGTTTCTTCAGGTGCATGGACAAT ACGCTGAATGTGTGAAATCAATCAATCAATCAATCAATCAACCAATCAAT CAACCAATCAATATAGACGGGGGGGGGAGAACCTGAACGCATCTAAACTA TAAACCTTCTGATCATCCATCCTATCAGGAGAAAATTGTTTTTACAACGT TTTAGTTGGAAGCATAGGCTGTGTAAGGATAAAAAATCTTCATGGAATTG AAATGGATTCCCAAATCGATGTTAGAGTTATCATAGCATAGGGTCAACAG CAGTATAATATTAATATCGGGGAGAAACCCACTGTTATACTATCTCTACA ATCCCACAGATCGCCATGCAGGTACACCAAAGCAGAGGCAAAAATACAGA CACGCTGAACGATAACAAAACTTAGTTATGTTATACTTCAGTATTGTGTT AGGTATCAGGTTCAAGGATTGGTGAATCGAAGTCGATTGTAGGATGTACG AGTTGCTTAGGGTCAACACTAAAATATCGGGAAGAGAGTATCAAAACGTT AAGGTGGGAAACCTAGTCTAGTCTGCAAAGACAAAAGGTCTTAATGGGAT TTAATTGGGTTATGTTCCCCGATGGCATAATTTTGTTCCACCAACTTGAT ACGGAGCCAGACTACCTTACTTAGTACAGAGGTGTATACCAGTAGTAGAA TTGTATTAATAGTCGAACAGTAGATGTTATTAATAGATGTTGTTTTCTCC TGCAGTATTCAGTGTGTTTATTAATGTTTTTTTCTATAAACCGGTACAAA TAAGATAGCCCCGCCTCGAGAAACCAAAGTAACGAAGTCGAAGTTCGTCT GCACAGCCAAAAACATTAACAGACAGTAGTAGTTGTGATCATCGAATGCG CGCAATATTCCCAATCCAGTCAACGCTTTGTTTTGTTTTCTCCTCCGAAC GTGTTCCCGGTTTGATTTGGTTTGGTTCCGTCTATCTTGTGACCACGGCT AGATTCGTAGCGGATCAGTTAGTGTGTGATAAACAACAACAACTGTGTTT ATGTAGGTATTTATGTATGTAATCGTGCACGCAAAATGGTCCTTCTGCAG GTTGCGTCGTCTGCAGGCGTGACGCAATTTGTAGTGCCCGGAAGCACCGT GGAGGATAGTCGCGCAGCCTTGGATCTTGCAAATCGGAAACCAAATGTAG GTGGCCCGTAACAACACGGTGTACTTTAGTGTACATAAAACATGGAACGT GATCCTGAAACACTCTTCGTCCAGAAAGAAAGCCTTTATCAACATCATCA AACGTGCGTCACAACATTAGTGCCGTCTCAAGTCTCAAGGATGCGGTCGA CATGGTAAATGATGTGCTCCGAGGCGCACCTACCGGCCACCCTCCCACGC ATGCTTTTCGCACCATTTTTTCATCCCACAGGTTGTTTTTCCTACGGCTG GAGTCCACCCGTACCACGTAGAGAGCTGCGGTGCGCTCGAGGAGGCGATG GCAGCAATTGCGACCCTGGCAGCGGCCAAAGACGGTGAGGGTGTACCCGT AGAGCTATGCCCGATAAAATGCTGATGCCTGTCTTCGACATTTGGACAAG TGGTCGGAACCCTTGCTCGAAGAAACGAAAGATGCATGTTTATTGTTAAT ACTGCGTTCGTACCAGTAGTACTAAAGTATTATTGTATTAGTAGTAAAAA AATATTTTGTGGCGGAGGCGAGCGATGGCTGGATGGACTCCTGGGTACGG TTCTACTCTCACCGAAGTTGCTGCGGTGGTCGCGACGCTGCTCTGCACTC CGTGCCTTCGCTGATCTCTTGAAACATGCCATGATATTGCTGCAGTGCGG TGTGTGGGAGAATGCGGCTTGGACTTCACAGAGGGGTTTCCCCCGGCCGA TTCACAACTCCCTTGGTTCGAGAGGCAAGTTCAGCTCGCTTGCGAGGTGA GACCAACTCCTGGACATCCACTTCATTTTTTTCACAACGCGGTATCGGTA CTCCTCGACTCATTTTTTACGCGAAGACCTGCATACAGCACGCGATACAG ATACACACCTAGACCGCGCAGTAGCTCTTTCCCTCGTATCGCATGTTCCC GACGCTGCTCGTACGTCTAGGTATCGTGTCGACAGCAACAATACCCTAAC AGGTACAAGGTACAACCATGAGCTTGCACGTGACACGAGCCACCCCAGCG TATAACATGTACTTTGACATCATTTTGGCTTTGACAGCGCTTTTTACGTT CTTCAAGCGTACTTCACTTGACTTTATTTTAGTTTCTGTGTTGTTTGTGG CCAAGATCGCCGAAGGAAGCAAAAGCGCTGAGTGCAGATAGTGCAGATAG CCAGCCTTCTCGCGTTGTTGCCATCACGCAGGCTCAAGTCGTATTCGCCT GAGATCGCCTGGTCCACGCTCCTTTTCTCCCGGTTCATGCAGCTCAAGAA GCCGCTGTTTCTCCACGAGCGCGGAGCGTTCGACGCGTTCTCCGAGGTTG GTTTAAACGACAAACGGACCACGGCTACGCGACCCTGACTACAGCAATAC GGTTCTGCAAATTAGTGATCCTCACCGCTTTCATTAGTAATGGTACTATT ATTAGTACTTAATAGTTCCCGGTGCGTCCGCGAAAATTTGATGTAATGTA AGTGTCACTCTCCTCGACGTGAATACCAGTGTCGACCAGCCCCCTACATC AACTGCGATCCGTTCAAAACCTCAAAACCGGGAGTAGTGTGAACGACACG ACCCTGCTTTCCTCGTGTAACACGCGCTCCCAATGCTCGGTTTCGACGAC TTTTATTTGATCAGGTTCTGAGGCGATATGACACGTCCCACGGTTTGCCC CCATGCCTGGTGCACTGCTTCACTGGAACACCGGAGGTGAGCAGCCATTA TGAAGGGCACAGCTCTCTCGCTTCTATTGAGTCTTAACGGAGACAGAGAC AGGGAGAGACGGAGAGAGAGGGAGATACAAAATCGACAATTAATAGCCTG TGTGTTGCACAAAAAGCGCATTTTTTTTTTTTAATAAATAAGGTGACGAG GATGCTATACAAGTGTGTGAACGCTATGCAAATAGTAAATAGTGATGAGA AGGTTCGGCACGACATCCCGGTGCCAGGGAACCTCGGCACAAAGGATGCC CATTGTTGGACAGGGAGCAACCTCTCTCCCTTCCACGATCGCTTCTACTC TTTTTAGTATCAAATTACACGGTTCCTCTCAAGACTCATGGCGGGTTTTC CGCACCCTGTCCCTTCTCCCGCGCCGCGTGTTCCTCAATGGTATGGCGTT CCTCAATGGCGTTCCTCAATGGCGTTCCTCAATGGCGGCGACGCAGGAGG TGGCGGCTTATCTGGACATGGGCTTTTTCGTCAGCGTGGCGGGTGGGATC TGCAGAGAAAAAAACGGAAAATTGCTCAGGGATGCGGTGAGTCTCCCTGA AAGCCCCCAAGTGTTCCTTCCAACACTGCGCAATAGTGAAGGGTTTGTTT GTACCAGGTACAGTGAAAGCTGAAGCTTTGTCAACAGTAACAGTAACAGT AACGGTATACTTCCTACATGAGAGCCCAAGCTTTGCTGTTTCTACAAGCA TCAACAATACTGCTGTACCAGGACTGACTGCTCTTGGACCTATTATTATA TTAGTATTAGTATAAATAATACTATTAATAATAGCAGTATTAGTATTAGT ATTAGTATAAATAATATCTACGAGTAGTAATAAATAGTTGCGATTCTTGG CTGAGTAAGTTCACACCATTGATGAAACCACTCCCTCTCCATTCCGCCAG TCGAATTGGATCTTTTGCACGAACACTTTTGGCAGGGGGGGGGGGGGAGG GTTTCGTTGGTAATATTAATACTGTAGTAAGAGTAGTGTAACAATTGGCT CATGAGGTTTAGGTGCTGTAGTGTATTACGAGTTTTGAGCGTTACTGTAC ATTGCGGTGCAAGCTGTTGACATGAACTGGCGGAAAGGAATGGGAAGAAT CCGTTAGGGATAATACATAATAGGATAATAACAATAGTCGGGGGGGCTGG GAAGTGTTGCAGTGAGTATGTATGGTGGTGGCACTGGTGAATCATGTTGA ATGTTGAATATGACCTACCTTACCCTTATGTCTTGAGAATATGGAAGAAA ACGAGGCCATCACAAGGTTCACCACTGACTTGCTCGACTCCAGGTGAAGC TGATTCCACTTGATCGGCTCATGGTTGAAACGGACGCGCCGTACCTTGGG TTCAAAGGATGTCGAAAAGGGTACGACAACCCCAAGAAGCAGGTGGGATT AAAGAAAAGTCTGGACGCATTTAAACTTCTGTGATCTATTCTGAGCGTCC ACCCAATCAGGGGGGGGTTATGACATTGAGTTGTCAAAACGTTACTAACT AGGTGGTATTAGAACATTGGCTGTAAGGACAAAAAATCTTATGGCATTTA ATTGGGTTCCCCGATGGTAGTAGAATAGAGTCAACAGTATCAAGACGGGG AGAAGAACACCGTTATACTGTATGTATGTATGTATGGTCATCACATATAG CATAGTATGGATCGACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCT GAACAGGGAAAATGAATATTCCCCTGTCCCCGTGCGTGCCTGAGAATTTG GTTTCGCGATGCGGGTTCATGAGTCCCGTCCTGCGCCAGCCTGCTCATCT CCATACTCAGGCTGAATCTGGTGTTTACTTACGGGATTCCTCCCGAGTTC CGCAGTGGTGTCCATATATGAAACCGCCATACGCCATCGGGTCAGACCCG AGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCAAGAGT CCGCCGGCACAGGGCCAGTAAACTTCAAGGTAGTTCCGAACGAGTGCTGC TGCCCTGGCAGGTCACCATGGACCAATTAATATTCGCCTCTCTTTCCCAC ACCCACTATTGGTATCAAGTGGGCATGTTGAAAGTACCGGCGGTACATTT ACATGAATCGCCATGCAGGGACACCAAGACAGAGGCAAAAGCACCCGTTG AATATATATGTATGGTCATCACATATAGCAAGGGTAAGGATCAACCGGAA AGGTTGCCAATCCTGCTCGTGATGAGCTGAACAGGGAAAAAAACATTTTC CCTGTCCGCGTTCGCGCCTAAAAATTTCAGGGCTTTCCTCGGTACCGATT TTTTATCTCGGTAACGTCGGGCGCTGTAAGCAGCCACCACGGTATTGCAC AGTAATTGGTGGACGGTAATTGGCAACCACGGAATACTTTGTACGGTAGC CAGCCACCACGGTAATGCACGGTAATTGTTGTACGGTAATTTGTCACCAC AGTAATTTTTGTACGGTAATCAGAAACCACGGTAATGCACAGTAATTTTA ACACGGTATTTGGCCACCTCGGCAATTTTTGTACGGAAACCAGAAATCAC GGTAATTTTTTATTTTTGACATGGTCAGAGATTCTCTTGCATGTGGCGTG TCACCGCGCCAGGGTTTGCATCCACATTCACCGAACACATCCTCCGTCAA CCGACGTGTTTCCAGATATTTTGATATTTTGATATTTTGCAGGCGGGCTC TCGCGGCCTTTGGTATTACCCATCACGACGACCAAAATCCAGAGCTTAGC CCAGCAAGTTCAACGTGCCAATCAACAGAGCAGACGACAAGCGGGAAAGC AACAGAGCTTTTAAGTTGAGAGCCACCCCCTCCCTCTTCCAGAGCGAAAA CCAAAGCCAGCACACGACACAGAAAAACAGAAAAATAGCAGCTGCAAAGC ATGCAACACCCCCGCACCGATTGCCCCCAGAAAACGTGAAAACCCCCAAA ACTCTCAATATTCGAAGCCCACCCTGAATACAGAAACAAGGAAGAAAATA GAAAAGAGAGTACAAATGAAAGAGGAATTAGAAACCAGAAGACAACAGAT GAAGTACTACTTCTGTGCGGTAGTTGGGGTTTTATCATTATTACGGAAAT TTGCCCCACGGTAACCAGAAATCACGGGAACCCCGCTTTTTGCACGGTAA TTGGTTTTACGGTAGCGGGAGATTGTGAATTCCTCGGTAACGTTTTGCAC GGTATTGGTAAATGTGTTTTTTCGCGGTAACGGGCGGCACGATAACGGTA ATTGTGTTTTATCACGTTAACGGCTTGCAGGGAAATTACCCTAGTTTTAC CGCAGTAAAAATACCGCGGGGAAACCCCCGAGGAAAGCCCTGAAAATTTT GGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCACCCTGCTCATC TCCATACTCGCTGAATCTGGTGCTTACTTACAAGATTCCTCCCGATTTCC GCGGCGGCGTCCATTTATTTATTTAAACCACCATACGCCATGGGGCCAGT TCCGAGTGTATCGGGTCACGCAATTGGGTGCCGATCTGCCGAGAGTCCAT CGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCAAACGGGTGTTGCCTTG GCAGGTCGCCATGGACCAATCAATAATTAATATGCGCCTCTCTTTCCCAC TGATATAGTACAGTATACCCACTATTGACATAATAAAAGTACCGGCGTTA TACACTTCAATGATGTCAAATTAGGTTTGGGATCGAGTTAGAGTATATAT ATGTATGGGCATGTATAGTTATTACATATAGCAAGTATACATCAACCGAG TAAGATTACTAATCCTGGTCAGGAAAAATAAATATCTCCCTGTCCCCGTT CGCGCCTGAGAATTTGATCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGC GTCAGCCTGCTCATCTCCATACTCAGGCTAAATCTGGTGGTTACTCATGG GATTCCTCCCGATTTCCGCGGCGGCGTCCATTTATTTATACCGCCATACG CCATCGAGTCCGTTCCGAGTTTATCTGCTCACGCAATTCCGTACCGATGG CGTTCACTGCCTAGAGTCCGTTGGCACAGGTCCAGTAGTCCTCAAGATAG GTCGAGTAACGGGTGCTCCCTTTGCAGGTCACCATGTACCAATTCAGTTT TTTGTTTGTTTGTTATCCCATTTATTCTGGACGTCAGACTACACCTTTCG GTCAATATGTGGACGCACCAGCCGGGGTCACGCAGGAGGGTTTTTTCTTT CACACCTTCCTTCTGCGGTGCTTGCCTTAATTTTTTATCTCGAGAAAGAT TCAGCTGTCCTTTTCCCTCGTCGACCGTGAAGTCGAAAATTTTGTACCCA CGACATAATCGTTCTCCACTTGTTTTTGAGAGAAAATCCCAGTTCGTGTG ACTGCGCCGAGATTCGAACTCACGTCCCAACGTCAGAGGGTTTCGAAGTG ACCAACTGAACCACCGGGGCGACCAGATAGTTCGAATAACGGGTGCTCCC TTTGCAGGCCACCTTGGACCAATTAATGTACGCCTCTCTTTCCCACTCCC ACTATTGGTATGAAGTATGAAGTGGTTATAGCATGTTGAAAGTACCAGAG TATTGATGAATCGGAGTCAATTGTAGAATATACTAATATATTATATTACG ATGTTCAAACAAGTTCCAGATTGACGAGGAAGGACACAAATTTGATCCTG ATTACTTAACATTTTTAGGTAAGTCTAACTGCAACAGATTACGGAAGGTA TGTGGTGTTTTCAATGCGGTGCAATTTTTAGTATGTATATATGCATGTAT GGTCATCACTTATAGCAGAGTATGTATCAACCAGGTAAGGTTGCCAATCC TGCTTGTGGTCAGCCGAACAGGGAAAGTGAATAAATCCTTGTCCCTGTTC GCGCCGTTTGTAAAATATACTGTTATGTTATATTATTGTAATGTTCAAAC AAGTTCCAGATTGACGAGGAAGGATACAAATATTATCCTGATAACTATTA GGTAAATCTAACTGCATTAGACTAAGGAAGATATGTGGTATTTTCGATGC GGTGCAATTTTTAGCATTATGGTCATAACATATAGCAGAGTATCATTATG TATCAACCGGGTAAGGTTGCCAATCCCGCTGGTGGTCAGAGCTGAACAGG GAAAATGAATATTTCCCTGTCCCCGTTCGCGCCTGAGAATTTGATCTCGC GAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACT CGCTGAATCTAGTGGTTACTTACGGGATTCCTCCCAATTTTCGCGGCGTG CGTCCATTTATTTATTTAGTACCTGGTATGTAAGTATGGTCACACATATA GCAAGAGTATGGATCAACCGGGTCAGGTTGCTAATCCTGCACGTGGTCAG CTGGACAGGGAAAATTAATATTTCCCTGTCCTCGCCTGTTTGGTCTCGCG AGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTC AGGCTGAATCTGGTCCTTACTTACGAGATTCTTCCCGAGTTCCGCGGCGG CGTCCATTTATTCATTTAAACCACCATACGCCATCGGGTCAGTCCCGAGT TTATCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTCCA CCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAAGGAGTGCTGCCTT GGCAGGTCACAATGGACCAATTACTATGCGCCTCTCTTTCCCATGGTATG AAGTGGGCATGTTGAAAGTACCGCCCTATATGATAAGACAAAATTTCTTC CGTGAAAGCGAAACAAAAATATCAAAGTTCGTGACAGAAGGAACTAACGT GTCAGCTTTCAAGGGCAAATCGAGTCTAGATGTAACTTCGAGGTTATAAG CAGGCAGAGGTTAGAGGCTCGAGGATGGGTAGAGTAACAAGAGACTACAC CCACCATTGACACCCTTATCCAGAACTATGCTACGCGGTGAGACGTAGGA TCACAACATCTTTATATGAGAGCGGAAGAAAGTACACGACAGATAGAATT TTAATATAAATATTTGATTCATATTTATAAAGACCTGGGGTAAAAAAAAA AAAAGTTGTGTCAATAGGACAATTATAGCAAAAGTTATAGTTAAGTTAAA ACACAATTGTAAATAGGTAAAAAATATTTCTGTTACTCCTGTTGTTACAA AATGGGATAAACCTTAAGGTAAAAATAAAAATATTAACCCTTGCTTATAA GTGTATGTAGTAAAAAAAAATATAAGCAACTCAGCTGGAGATGGTATAAT GGGGATTTATTTTTATTTTTCAAGTGGGCATAACTAGTAAAGGAGATCAA AACTAGTGACTCAAGTCTTGCATAATCCAGAAAGTACCAGAGACCATAAG CATGTTCACTTGAGAGGAGACGAAGGGCATGTTTCACGACTTGGCGTGTT GCCACGCCCGTTTCCATGCTTTTCAATACAATTATGTATATTTATATATC TTTATATAAATGTCGATACCCTTCCCCACATGATACACTTTTGACTTTGT TTTTCTTTGCCAGAAATCTGCCGCCCTTCCCGCGTTGAATGGGAGTGCAA CTCGTCTTGTGGTTTGTTGTTAGGGTTCGCTTTGTTGGATGCCACAGTAG CTTCAACGATAGGAATTGTTTGAAACGAAAACCTTTATTATTTGTACGAT TTTGTGACTACGGCAACTCTTCACACCACACAGCAGGCTGGATAGGCTTC ACTTGCATCTGCTATTTGATAATGAGCCTATAGCCAATACCACCGTGTTT ACACAACTCCCGCCCCCCCCCCGTTTTCTGCCGATGTTTGTTTGTTTTCT ACTATCGCACATCTTTGTTTTCAGAACCCTAATGTTCCTTCTGCACTTCC AGCTGTGATACAAGTTGCTGCAGATTGCCTCGGACTGCCTTTCGATCAAG TGGCTCGAGCGACAGCGGAAAACAGTCGAGGTTTCTTTGGAATCACAGAG CGATCAGCTTCGTAATTTTATCTTGTCCGGGTGAAATGTGGCAGTCTAGG CGTCCTGCGCACGCGGTCGTCCCAGCGCTGACGCCTATAGAAGCTTGAAT GGTTTTTTTTTATCCTGATCGTGCTACGAGTAATACAAAACGAACTTGGG AGATTATCTGTTCAATGCTTATTATGGCGTCAGCGTAGCAGTACTGAATT TTGCGCCTTGCCGATGAACCACACAACACCCTCGAATAGTGTAGTGTACA GGATTGTGTCTTTAGTTTGAG
back to top

Coding sequence (CDS) from alignment at A-nodosum_M_contig953:61086..78556+

>mRNA_A-nodosum_M_contig953.14.2 ID=mRNA_A-nodosum_M_contig953.14.2|Name=mRNA_A-nodosum_M_contig953.14.2|organism=Ascophyllum nodosum dioecious|type=CDS|length=1020bp|location=Sequence derived from alignment at A-nodosum_M_contig953:61086..78556+ (Ascophyllum nodosum dioecious)
ATGGAGCAACGTGCGAGTTTGGGCTTTTTCATGGCGCTGGTGGCTAATCG
ACCTGTTCGGCCTGTAGCAGCGCTCAACTTCCTTCAGTTTTCTGGAGCGC
GCCAAGGTCGGAGCATGCCAGGTGTGGCTCTGAGGGTAGCCACGTCTACC
CCCTCCGCCCCTACTTCAGCGGCCACGGATCTTGACCTTGTAGACGTTGA
TGCCAACCTCTTGCATCCGGACCTCGCGAGCGACATTGAGCTCCATATAC
AGGCGAGTAGCAAAGTTGCGTCGTCTGCAGGCGTGACGCAATTTGTAGTG
CCCGGAAGCACCGTGGAGGATAGTCGCGCAGCCTTGGATCTTGCAAATCG
GAAACCAAATGTTGTTTTTCCTACGGCTGGAGTCCACCCGTACCACGTAG
AGAGCTGCGGTGCGCTCGAGGAGGCGATGGCAGCAATTGCGACCCTGGCA
GCGGCCAAAGACGTGCGGTGTGTGGGAGAATGCGGCTTGGACTTCACAGA
GGGGTTTCCCCCGGCCGATTCACAACTCCCTTGGTTCGAGAGGCAAGTTC
AGCTCGCTTGCGAGCTCAAGAAGCCGCTGTTTCTCCACGAGCGCGGAGCG
TTCGACGCGTTCTCCGAGGTTCTGAGGCGATATGACACGTCCCACGGTTT
GCCCCCATGCCTGGTGCACTGCTTCACTGGAACACCGGAGGAGGTGGCGG
CTTATCTGGACATGGGCTTTTTCGTCAGCGTGGCGGGTGGGATCTGCAGA
GAAAAAAACGGAAAATTGCTCAGGGATGCGGTGAAGCTGATTCCACTTGA
TCGGCTCATGGTTGAAACGGACGCGCCGTACCTTGGGTTCAAAGGATGTC
GAAAAGGGTACGACAACCCCAAGAAGCAGAACCCTAATGTTCCTTCTGCA
CTTCCAGCTGTGATACAAGTTGCTGCAGATTGCCTCGGACTGCCTTTCGA
TCAAGTGGCTCGAGCGACAGCGGAAAACAGTCGAGGTTTCTTTGGAATCA
CAGAGCGATCAGCTTCGTAA
back to top