prot_A-nodosum_M_contig948.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig948.5.1
Unique Nameprot_A-nodosum_M_contig948.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length52
Homology
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5K0G3_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0G3_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 2.130e-8
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 0
Query:    1 MSLPQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKAD 52
            MS PQ   WK    KE+A L+KH+VY LVP  SVP G K++G++ V K   D
Sbjct:  814 MSYPQREEWKGVCSKEVADLRKHNVYNLVPLSSVPKGDKILGTKFVFKKMLD 865          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5JLX1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLX1_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 2.480e-8
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    6 AARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKA 51
            A +WKAA DKE+ SLK HDV +LVP  S+P G K +GSR + K+KA
Sbjct:    3 ADQWKAAMDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKA 48          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.980e-8
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 0
Query:    1 MSLPQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKAD 52
            MS PQ   WK A  KE+ +L+KH+VY LVP  SVP+G+K++G++ V K   D
Sbjct:  193 MSSPQREEWKGACSKEMYNLRKHNVYILVPLSSVPEGEKILGTKFVFKKTLD 244          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5JVC8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVC8_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 9.380e-8
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    6 AARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKA 51
            A +WKAA DKE+ SLK HDV +LVP  S+P G K +GSR + K+KA
Sbjct:    6 ADQWKAAMDKEMRSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKA 51          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A067MMT3_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Botryobasidium botryosum FD-172 SS1 TaxID=930990 RepID=A0A067MMT3_9AGAM)

HSP 1 Score: 52.4 bits (124), Expect = 1.230e-7
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    4 PQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKAD 52
            P A  W+   ++E+AS++KH+VYELVP  SVP G+K++ ++   K+K D
Sbjct:   17 PYADNWREGYEEELASIRKHEVYELVPRSSVPKGRKVIQNKPCFKLKRD 65          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5KY84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY84_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 1.400e-7
Identity = 27/46 (58.70%), Postives = 34/46 (73.91%), Query Frame = 0
Query:    6 AARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKA 51
            A +WKAA DKE+ SLK HDV +LVP  S+P G K +GSR + K+KA
Sbjct:  902 ADQWKAAMDKEMKSLKDHDVADLVPIQSLPPGAKPIGSRWLYKMKA 947          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5KCZ9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.900e-7
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    6 AARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKA 51
            A +WKAA DKEI SLK HDV +LVP   +P G K +GSR + K+KA
Sbjct:  338 ADQWKAAMDKEIRSLKDHDVADLVPVQRLPPGAKPIGSRWLYKMKA 383          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A6H5JC75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC75_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 4.890e-7
Identity = 26/49 (53.06%), Postives = 34/49 (69.39%), Query Frame = 0
Query:    4 PQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIKAD 52
            P  A+W  AA++EIASLK+  +YELVP  +VP G+K   S+ V K KAD
Sbjct:  999 PDRAQWNTAAEREIASLKERQLYELVPRTAVPPGRKRTKSKWVFKSKAD 1047          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: A0A5K1JUY4_9APHY (AHL receptor (Quorum sensing LuxR family sensor regulator) n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1JUY4_9APHY)

HSP 1 Score: 49.7 bits (117), Expect = 1.520e-5
Identity = 23/50 (46.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 MSLPQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIK 50
            MS P AA+W+AA  +E AS++ H+V++LVP  SVP G+K++  + V ++K
Sbjct:  214 MSSPFAAQWRAALLEEFASIRAHEVFDLVPRTSVPVGRKVLTGKPVFRLK 263          
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Match: Q55IK1_CRYNB (Integrase catalytic domain-containing protein n=2 Tax=Cryptococcus neoformans TaxID=5207 RepID=Q55IK1_CRYNB)

HSP 1 Score: 48.1 bits (113), Expect = 5.400e-5
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0
Query:    1 MSLPQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIK 50
            M+ PQA+ W+AAAD E+ASL K  V+  VP  S+P   K+V  + V K+K
Sbjct:  990 MASPQASDWRAAADDEMASLIKAQVFHYVPRSSLPPQSKVVSCKWVFKVK 1039          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig948.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5K0G3_9PHAE2.130e-850.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JLX1_9PHAE2.480e-858.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE3.980e-850.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JVC8_9PHAE9.380e-858.70Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A067MMT3_9AGAM1.230e-744.90Uncharacterized protein (Fragment) n=1 Tax=Botryob... [more]
A0A6H5KY84_9PHAE1.400e-758.70Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KCZ9_9PHAE1.900e-758.70Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JC75_9PHAE4.890e-753.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A5K1JUY4_9APHY1.520e-546.00AHL receptor (Quorum sensing LuxR family sensor re... [more]
Q55IK1_CRYNB5.400e-548.00Integrase catalytic domain-containing protein n=2 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig948contigA-nodosum_M_contig948:216831..216986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig948.5.1mRNA_A-nodosum_M_contig948.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig948 216831..217007 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig948.5.1 ID=prot_A-nodosum_M_contig948.5.1|Name=mRNA_A-nodosum_M_contig948.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=52bp
MSLPQAARWKAAADKEIASLKKHDVYELVPAPSVPDGQKLVGSRLVNKIK
AD
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