prot_A-nodosum_M_contig944.33.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig944.33.1
Unique Nameprot_A-nodosum_M_contig944.33.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length347
Homology
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BLAST of mRNA_A-nodosum_M_contig944.33.1 vs. uniprot
Match: A0A6H5KKS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS6_9PHAE)

HSP 1 Score: 75.1 bits (183), Expect = 3.110e-11
Identity = 61/153 (39.87%), Postives = 83/153 (54.25%), Query Frame = 0 
Query:    7 KEAEFRRGPFGHGPRAFAKVVERVTARLQSRLARERAP-SAAAALADAVDKAWRETYAGPLPTEKEVLQQRFKIL--GGRAKRSTQGASGAVQETAAGP---SLMRK------------------RRFVLKALRKNGKKRKRTRMGGNDGVSA 135
            +EA    GP+G+G RAFAKVVE VTARL++RLA      +AAAA+A  V++AWR+ Y  PLP+E EV+ +   +     R  R +  +S   + T A P   SL RK                  R+FVLKA+  N    KR R+G  + V+A
Sbjct:   27 EEALLTSGPYGYGSRAFAKVVETVTARLETRLAAAGGDRAAAAAVAGKVNEAWRDMYNRPLPSEAEVMHRILTVAPADARPSRRSSASSDLWRSTGAWPQTASLPRKNEQSIATADAATATRTPKRKFVLKAIAAN----KRHRVGSTNAVAA 175
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig944.33.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KKS6_9PHAE3.110e-1139.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig944contigA-nodosum_M_contig944:288580..294658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig944.33.1mRNA_A-nodosum_M_contig944.33.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig944 288526..295197 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig944.33.1 ID=prot_A-nodosum_M_contig944.33.1|Name=mRNA_A-nodosum_M_contig944.33.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=347bp
MPKETEKEAEFRRGPFGHGPRAFAKVVERVTARLQSRLARERAPSAAAAL
ADAVDKAWRETYAGPLPTEKEVLQQRFKILGGRAKRSTQGASGAVQETAA
GPSLMRKRRFVLKALRKNGKKRKRTRMGGNDGVSAEERDGAAGRNAEDES
MPQDKVGRAAEEEHTVDSDGAGAPRRIDEERGCCNIACAKGDDKGADGCT
GHGSRAGSVEVSSASTACAQGDGGASTGERGEGGRADTDESRKPALDPGR
GGVEKQGSERTGFEEKKGPASPGADAGHDSEGHAKSEVEEEAEPPDVIVT
ANFVGDLKKGALSKRKKWRVVLEGGALEGYGGVLVFDKCMCSFVSS*
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