prot_A-nodosum_M_contig932.15.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig932.15.3
Unique Nameprot_A-nodosum_M_contig932.15.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length280
Homology
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BLAST of mRNA_A-nodosum_M_contig932.15.3 vs. uniprot
Match: D8LTF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTF5_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 1.020e-30
Identity = 93/242 (38.43%), Postives = 124/242 (51.24%), Query Frame = 0 
Query:   48 NPPGSASDAQEWLAKLMSQWFKLPIPLWPAPIAAKGSRSASLAPDDVRVTIQELRDSNAKLRAEVLDLRLYMQRRGFMLEAEGSKVDPSARLTLSSPSPQSSRPTEGTSPQTTSKRPPPKLPREAQLAALALLWAAAISAGGIFVPVAIGEGAARTLRWLDDDGNLVPERLRRPSVWEGGRRWRXXXLHRRRRCNPSLVPVRA----------SGVMVQCDDQLRSSGDSLAGAWNELISSR 279
            +PP        WLA +M+ WF LP+       +  G        DD+R  I +LR SNA LR EVL LR  M +RGF    +   V  +A  T +  +P S    +  + +    +PP KL REA+LAAL +LW AA++ GG+FVP+AIG GAAR+LRWLD+ G LVP+R  RP     GR WR       R    S VPV A           G++          G++LA AW+E+   R
Sbjct:   69 SPPAQPLQQTPWLADIMASWFNLPL----RNTSPSGGTKRRSTRDDIRADILKLRVSNADLREEVLALRNSMVQRGFFPVDD---VFATATATATGGTPASGNGQQPPTSEGGDPKPPAKLQREARLAALVVLWGAAVALGGVFVPIAIGVGAARSLRWLDNGGTLVPKRWSRPL----GRGWR-------RARALSFVPVLARPPRDGGGGGEGLVT---------GEALADAWDEMYPPR 283
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig932.15.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTF5_ECTSI1.020e-3038.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 136..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig932contigA-nodosum_M_contig932:136152..143042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig932.15.3mRNA_A-nodosum_M_contig932.15.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig932 132761..143199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig932.15.3 ID=prot_A-nodosum_M_contig932.15.3|Name=mRNA_A-nodosum_M_contig932.15.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=280bp
MKPKRKLVKELNLCVLFGALVMMTTLEKATAFGSNHVSPKPRSSARANPP
GSASDAQEWLAKLMSQWFKLPIPLWPAPIAAKGSRSASLAPDDVRVTIQE
LRDSNAKLRAEVLDLRLYMQRRGFMLEAEGSKVDPSARLTLSSPSPQSSR
PTEGTSPQTTSKRPPPKLPREAQLAALALLWAAAISAGGIFVPVAIGEGA
ARTLRWLDDDGNLVPERLRRPSVWEGGRRWRWRWLHRRRRCNPSLVPVRA
SGVMVQCDDQLRSSGDSLAGAWNELISSR*
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