prot_A-nodosum_M_contig9312.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9312.1.1
Unique Nameprot_A-nodosum_M_contig9312.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length87
Homology
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A6H5L594_9PHAE (Ribosomal_L23eN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L594_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 2.300e-48
Identity = 80/86 (93.02%), Postives = 86/86 (100.00%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M+KHR++K+PLTTESAMKKIEDNNTLVFIVDVKSNKRQIK+AVKALYDIESQNVNTLIRPDGKKKAYVRLTQD+DALEVANKIGII
Sbjct:   59 MNKHRIIKFPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKDAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDFDALEVANKIGII 144          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A835Z6Z2_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.250e-42
Identity = 74/86 (86.05%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K R++KYPLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV+ALY+I  Q VNTLIRPDG KKAYVRLTQDYDALEVANKIGII
Sbjct:   63 MDKFRIIKYPLTTESAMKKIEDNNTLVFIVDVKANKRQIKAAVRALYEISCQKVNTLIRPDGLKKAYVRLTQDYDALEVANKIGII 148          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A7S2STG4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STG4_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.650e-41
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M KHR++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIK+AV  ++DI+ Q VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:   71 MDKHRIIKYPLTTESAMKKIEDNNTLVFIVDVTANKRQIKDAVSQMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 156          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A6U1J6R7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1J6R7_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.910e-41
Identity = 70/86 (81.40%), Postives = 80/86 (93.02%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K+R++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIK+AVKA+Y+I    VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:   55 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVAANKRQIKDAVKAMYEISCSKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 140          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: F0YN25_AURAN (60S ribosomal protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN25_AURAN)

HSP 1 Score: 137 bits (346), Expect = 9.370e-41
Identity = 69/86 (80.23%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K+R++KYPLTTESAMKKIEDNNTLVFIVDV +NKRQIK+AVK +Y+I    VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:    1 MDKYRVIKYPLTTESAMKKIEDNNTLVFIVDVLANKRQIKDAVKQMYEIACAKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 86          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A7S4QLV7_9DINO (Hypothetical protein n=3 Tax=Sar TaxID=2698737 RepID=A0A7S4QLV7_9DINO)

HSP 1 Score: 134 bits (338), Expect = 1.030e-38
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K+R +KYPLTTESAMKKIEDNNTLVFIVD+ +NKRQIK AV+ LY+I+   VNTL+RPDG KKAYVRLTQD+DAL+VAN+IGII
Sbjct:   64 MDKYRTIKYPLTTESAMKKIEDNNTLVFIVDISANKRQIKEAVRQLYEIQCAKVNTLVRPDGLKKAYVRLTQDFDALDVANRIGII 149          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A2D4BQZ7_PYTIN (60S ribosomal protein L23a putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BQZ7_PYTIN)

HSP 1 Score: 134 bits (337), Expect = 1.430e-38
Identity = 65/86 (75.58%), Postives = 79/86 (91.86%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K+R++K PLTTESAMKKIEDNNTLVF+VD+ +NKRQIK+A+K LYDI++  VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDILANKRQIKDAIKQLYDIKAAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A7S2DT56_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DT56_9STRA)

HSP 1 Score: 134 bits (337), Expect = 1.510e-38
Identity = 67/86 (77.91%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            + K+ ++K PLTTESAMKKIEDNNTLVFIVDVK+NKRQIK AV  ++DI+ Q VNTLIRPDG+KKAYVRLTQDYDAL+VAN+IGII
Sbjct:   65 LDKYHIIKCPLTTESAMKKIEDNNTLVFIVDVKANKRQIKQAVTNMHDIQCQKVNTLIRPDGQKKAYVRLTQDYDALDVANRIGII 150          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A2Z7AP73_9LAMI (Uncharacterized protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7AP73_9LAMI)

HSP 1 Score: 133 bits (334), Expect = 1.980e-38
Identity = 64/84 (76.19%), Postives = 80/84 (95.24%), Query Frame = 0
Query:    3 KHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            K++++KYPLTTESAMKKIEDNNTLVFIVD++++K++IK+AVK +YDI+++ VNTLIRPDG KKAYVRLT DYDAL+VANKIGII
Sbjct:   41 KYQILKYPLTTESAMKKIEDNNTLVFIVDIRADKKKIKDAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 124          
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Match: A0A3F2RWD3_9STRA (Ribosomal_L23eN domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWD3_9STRA)

HSP 1 Score: 134 bits (336), Expect = 2.020e-38
Identity = 67/86 (77.91%), Postives = 78/86 (90.70%), Query Frame = 0
Query:    1 MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIESQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII 86
            M K+R++K PLTTESAMKKIEDNNTLVF+VD+ SNKRQIK+AVK LYDI+   VNTLIRPDG+KKAYVRLT DYDAL+VAN+IG+I
Sbjct:   63 MDKYRIIKSPLTTESAMKKIEDNNTLVFLVDLLSNKRQIKDAVKQLYDIKVAKVNTLIRPDGQKKAYVRLTADYDALDVANRIGVI 148          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9312.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L594_9PHAE2.300e-4893.02Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]
A0A835Z6Z2_9STRA2.250e-4286.05Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S2STG4_9STRA1.650e-4181.40Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6U1J6R7_9STRA2.910e-4181.40Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YN25_AURAN9.370e-4180.2360S ribosomal protein n=1 Tax=Aureococcus anophage... [more]
A0A7S4QLV7_9DINO1.030e-3876.74Hypothetical protein n=3 Tax=Sar TaxID=2698737 Rep... [more]
A0A2D4BQZ7_PYTIN1.430e-3875.5860S ribosomal protein L23a putative n=1 Tax=Pythiu... [more]
A0A7S2DT56_9STRA1.510e-3877.91Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A2Z7AP73_9LAMI1.980e-3876.19Uncharacterized protein n=1 Tax=Dorcoceras hygrome... [more]
A0A3F2RWD3_9STRA2.020e-3877.91Ribosomal_L23eN domain-containing protein n=2 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..86
e-value: 3.3E-37
score: 129.3
IPR019985Ribosomal protein L23TIGRFAMTIGR03636TIGR03636coord: 10..86
e-value: 2.9E-29
score: 99.2
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 7..66
e-value: 2.5E-14
score: 53.4
IPR013025Ribosomal protein L25/L23PANTHERPTHR1162060S RIBOSOMAL PROTEIN L23Acoord: 3..86
IPR013025Ribosomal protein L25/L23HAMAPMF_01369_ARibosomal_L23_Acoord: 6..86
score: 21.855709
IPR001014Ribosomal protein L23/L25, conserved sitePROSITEPS00050RIBOSOMAL_L23coord: 64..79
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 5..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9312contigA-nodosum_M_contig9312:8501..11107 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9312.1.1mRNA_A-nodosum_M_contig9312.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9312 7785..15442 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9312.1.1 ID=prot_A-nodosum_M_contig9312.1.1|Name=mRNA_A-nodosum_M_contig9312.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=87bp
MHKHRLVKYPLTTESAMKKIEDNNTLVFIVDVKSNKRQIKNAVKALYDIE
SQNVNTLIRPDGKKKAYVRLTQDYDALEVANKIGII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR019985Ribosomal_L23
IPR013025Ribosomal_L25/23
IPR001014Ribosomal_L23/L25_CS
IPR012678Ribosomal_L23/L15e_core_dom_sf