prot_A-nodosum_M_contig93.61.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig93.61.1
Unique Nameprot_A-nodosum_M_contig93.61.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length158
Homology
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: D8LN00_ECTSI (Superoxide dismutase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN00_ECTSI)

HSP 1 Score: 251 bits (641), Expect = 2.000e-82
Identity = 110/158 (69.62%), Postives = 132/158 (83.54%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSKY 158
            V N N+FIEADP L+GL LWKL+K+TEG+IFNN AQ+YNHNLYWNS+SP GGG PTG L  AI  AFG++ DF+  FT  A+GHFGSGWAWL++ ED ++DVVDS DA NP+SEG G PLL CDVWEHAYYLDYQNLRA+Y++G+W +VNWDYA S+Y
Sbjct:   61 VNNMNAFIEADPELEGLSLWKLMKQTEGTIFNNAAQIYNHNLYWNSLSPSGGGMPTGDLYTAIVAAFGSYEDFQTAFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPVSEGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESEY 218          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: D7FRS6_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRS6_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 1.640e-76
Identity = 104/158 (65.82%), Postives = 128/158 (81.01%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSKY 158
            V N N+FIEADP L+GL L  L+ +TEG+IFNN AQ+YNHNLYWNS+SP GGG P G L  AI+ AFG++ +F+  FT  A+GHFGSGWAWL++ ED ++DVVDS DA NP S+G G PLL CDVWEHAYYLDYQNLRA+Y++G+W +VNWDYA S+Y
Sbjct:   61 VNNMNAFIEADPDLEGLSLSALMDQTEGTIFNNAAQIYNHNLYWNSLSPSGGGVPEGDLYTAIQSAFGSYEEFQTTFTDLASGHFGSGWAWLMMHEDGSVDVVDSHDASNPESDGLGFPLLVCDVWEHAYYLDYQNLRASYIEGWWALVNWDYAESEY 218          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: D8LI17_ECTSI (Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LI17_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 8.900e-62
Identity = 85/155 (54.84%), Postives = 110/155 (70.97%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYAS 155
            VT  N+ I  +  L+G  L +++K   G +FNN AQV+NH  YW S+SP GGGEPTG + EAIE+ FG+F  FK  F+  A GHFGSGWAWL+ TE   +DVV + DA NP+ EG G P+LTCDVWEHAYY+DY+N R  Y+  +W +VNWD+A+
Sbjct:   36 VTKLNAAISTNSELEGKSLDEIMKTASGGVFNNAAQVWNHTFYWKSLSPSGGGEPTGAVKEAIEEKFGSFEAFKKAFSDTAAGHFGSGWAWLVKTESGGVDVVGTHDASNPVKEGKGTPILTCDVWEHAYYIDYRNSRPGYIAAWWNLVNWDFAN 190          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A356T2V4_9DELT (Superoxide dismutase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T2V4_9DELT)

HSP 1 Score: 196 bits (498), Expect = 3.070e-61
Identity = 88/157 (56.05%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSK 157
            V   N  +E D SLQG  L  LIK  +G +FNN AQV+NH  YWNS+SP+GGGEPTG + +AI+ +FG+F+DFK+ F+ AA+GHF SGWAW++ T  D LD+VD  DA NP++ G   P+LTCDVWEHAYY+DY+N R  Y+  +W +VNWD+A+S+
Sbjct:   36 VNKLNKAVEDDASLQGKSLEDLIKTQKGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGKIADAIKKSFGSFSDFKEQFSKAASGHFASGWAWVV-TSGDGLDIVDLHDAGNPLTMG-KTPVLTCDVWEHAYYIDYRNARPDYIAAWWNLVNWDHANSQ 190          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A2E9XTZ9_9RICK (Superoxide dismutase n=10 Tax=Proteobacteria TaxID=1224 RepID=A0A2E9XTZ9_9RICK)

HSP 1 Score: 195 bits (495), Expect = 9.360e-61
Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSKY 158
            VTN N  IE     +G  L ++I+ +EG +FNN AQV+NH  YWNS+SP+GGGEPTG L +AI  AFG+FADFK+ FT++A G+FGSGW WL+     +L++V++S+A+ PI++    PL+T DVWEHAYY+DY+N R  Y+  FWE+VNWD+AS  +
Sbjct:   36 VTNLNKMIEGT-DFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNSLSPNGGGEPTGALADAINAAFGSFADFKEKFTASAAGNFGSGWTWLVKNASGSLEIVNTSNADTPITDAGITPLMTVDVWEHAYYVDYRNARPEYLKNFWELVNWDFASKNF 192          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A7S2V2G5_9STRA (Superoxide dismutase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2G5_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.850e-60
Identity = 81/158 (51.27%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSKY 158
            VT  N+ +      +G  L +++    G +FNN AQ++NH  YWNSMSP+GGGEP+G + +AI  +FG+F  FK+ F+++A GHFGSGWAWL   +D +L++VD+ DA NP+ EG G P+LTCDVWEHAYY+DY+N R +Y+  +W V+NWD+A+S Y
Sbjct:   36 VTKLNAALPGS-EFEGKSLEEIMMNASGGMFNNAAQIWNHTFYWNSMSPNGGGEPSGPISDAINSSFGSFESFKEKFSASAGGHFGSGWAWLCKKDDGSLEIVDTHDASNPLKEGKGKPILTCDVWEHAYYIDYRNARPSYIAAWWNVINWDFANSNY 192          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A0F6YK52_9DELT (Superoxide dismutase n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6YK52_9DELT)

HSP 1 Score: 193 bits (491), Expect = 3.560e-60
Identity = 86/157 (54.78%), Postives = 117/157 (74.52%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSK 157
            VTN N F++ DPSLQG  L  +I+ ++G +FNN AQV+NH  YW+SM P GGGEPTG +  AI+ +FG+FA FK+ F++ A GHF SGWAWL+   D  L++VD+ DA  P++     P+LTCDVWEHAYY+DY+N RA YV+ +W +VNWD+A+S+
Sbjct:   36 VTNLNKFVDQDPSLQGKSLEDIIRTSKGPVFNNAAQVWNHTFYWHSMRPGGGGEPTGAIKGAIDKSFGSFATFKEQFSAKAVGHFASGWAWLVKNGD-KLEIVDTHDAGTPLTMD-RKPILTCDVWEHAYYVDYRNARAKYVESWWNLVNWDHANSQ 190          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A661MY79_9DELT (Superoxide dismutase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661MY79_9DELT)

HSP 1 Score: 193 bits (491), Expect = 3.670e-60
Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASS 156
            V   N+  EAD S+ G  L  L++  EG +FNN AQ++NH  YWNSMSPDGGGEPTG + EAI+ +FG+F+DFKD F+  A GHFGSGWA+L+  + D L +V   DA NP+ +G   PLLTCDVWEHAYYLDYQN R  Y++ +W +VNW +A S
Sbjct:   36 VNKLNAAAEADSSIAGKSLEDLVRTAEGGVFNNAAQIWNHTCYWNSMSPDGGGEPTGKIAEAIKASFGSFSDFKDQFSKTAAGHFGSGWAFLVK-DGDRLAIVGEHDAGNPLRDG-KTPLLTCDVWEHAYYLDYQNARPKYIEAWWNLVNWKFAES 189          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: A0A411HH13_9GAMM (Superoxide dismutase n=1 Tax=Pseudolysobacter antarcticus TaxID=2511995 RepID=A0A411HH13_9GAMM)

HSP 1 Score: 191 bits (486), Expect = 2.110e-59
Identity = 86/156 (55.13%), Postives = 116/156 (74.36%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASS 156
            VTN N+ I+     + L L  +IK+++G +FNN AQ++NH  YW+S+SP+GGGEPTG L +AI  AFG+FA+FKD FT AA G FGSGWAWL+   D +L +V +S+A  PI+ G   PLLTCDVWEHAYY+DY+N R  Y++ FW +VNW++A+S
Sbjct:   36 VTNLNNLIKGT-EFENLDLEAIIKKSQGGMFNNAAQIWNHTFYWHSLSPNGGGEPTGKLADAISKAFGSFAEFKDQFTKAAVGTFGSGWAWLVQRADGSLGIVSTSNAATPIT-GPDTPLLTCDVWEHAYYIDYRNARPKYLEAFWNLVNWEFAAS 189          
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Match: V5C2C2_9GAMM (Superoxide dismutase n=2 Tax=Methyloglobulus TaxID=1410680 RepID=V5C2C2_9GAMM)

HSP 1 Score: 191 bits (486), Expect = 2.180e-59
Identity = 85/158 (53.80%), Postives = 115/158 (72.78%), Query Frame = 0
Query:    1 VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPDGGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTLDVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVNWDYASSKY 158
            VTN N+ +      +GLPL ++I ++ G IFNN AQ++NH  YWNS+SPDGGGEP G L +AI   FG+FADFK+ FT  A   FGSGWAWL+ T +  L +V +S+A  P++EG+  PLLTCDVWEHAYY+DY+N R  Y++ FW +VNWD+A++ +
Sbjct:   36 VTNLNNLVPGT-EFEGLPLEEIILKSSGGIFNNAAQIWNHTFYWNSLSPDGGGEPKGALADAINAEFGSFADFKEAFTKCAATTFGSGWAWLVKTPEGKLALVSTSNAGCPLTEGY-TPLLTCDVWEHAYYVDYRNARPAYLEAFWALVNWDFAAANF 191          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig93.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN00_ECTSI2.000e-8269.62Superoxide dismutase n=1 Tax=Ectocarpus siliculosu... [more]
D7FRS6_ECTSI1.640e-7665.82Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LI17_ECTSI8.900e-6254.84Superoxide dismutase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A356T2V4_9DELT3.070e-6156.05Superoxide dismutase n=2 Tax=Myxococcales TaxID=29... [more]
A0A2E9XTZ9_9RICK9.360e-6153.80Superoxide dismutase n=10 Tax=Proteobacteria TaxID... [more]
A0A7S2V2G5_9STRA2.850e-6051.27Superoxide dismutase n=1 Tax=Fibrocapsa japonica T... [more]
A0A0F6YK52_9DELT3.560e-6054.78Superoxide dismutase n=2 Tax=Sandaracinus amylolyt... [more]
A0A661MY79_9DELT3.670e-6056.41Superoxide dismutase n=1 Tax=Deltaproteobacteria b... [more]
A0A411HH13_9GAMM2.110e-5955.13Superoxide dismutase n=1 Tax=Pseudolysobacter anta... [more]
V5C2C2_9GAMM2.180e-5953.80Superoxide dismutase n=2 Tax=Methyloglobulus TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001189Manganese/iron superoxide dismutasePRINTSPR01703MNSODISMTASEcoord: 122..134
score: 75.7
coord: 31..44
score: 42.35
coord: 84..92
score: 76.27
IPR001189Manganese/iron superoxide dismutasePIRSFPIRSF000349MnSOD_FeSODcoord: 1..158
e-value: 5.6E-61
score: 203.6
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilyGENE3D3.55.40.20coord: 47..158
e-value: 6.8E-40
score: 137.4
IPR036314Manganese/iron superoxide dismutase, C-terminal domain superfamilySUPERFAMILY54719Fe,Mn superoxide dismutase (SOD), C-terminal domaincoord: 50..158
IPR019832Manganese/iron superoxide dismutase, C-terminalPFAMPF02777Sod_Fe_Ccoord: 55..156
e-value: 1.2E-35
score: 121.7
IPR019831Manganese/iron superoxide dismutase, N-terminalPFAMPF00081Sod_Fe_Ncoord: 1..48
e-value: 1.2E-5
score: 25.7
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilyGENE3D1.10.287.990Fe,Mn superoxide dismutase (SOD) domaincoord: 1..46
e-value: 1.4E-10
score: 43.7
IPR036324Manganese/iron superoxide dismutase, N-terminal domain superfamilySUPERFAMILY46609Fe,Mn superoxide dismutase (SOD), N-terminal domaincoord: 1..49
NoneNo IPR availablePIRSRPIRSR000349-1PIRSR000349-1coord: 1..158
e-value: 3.7E-56
score: 187.8
NoneNo IPR availablePANTHERPTHR42769SUPEROXIDE DISMUTASEcoord: 1..157
NoneNo IPR availablePANTHERPTHR42769:SF3SUPEROXIDE DISMUTASE [FE] 2, CHLOROPLASTICcoord: 1..157
IPR019833Manganese/iron superoxide dismutase, binding sitePROSITEPS00088SOD_MNcoord: 124..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig93contigA-nodosum_M_contig93:730209..731855 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig93.61.1mRNA_A-nodosum_M_contig93.61.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig93 730209..731855 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig93.61.1 ID=prot_A-nodosum_M_contig93.61.1|Name=mRNA_A-nodosum_M_contig93.61.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=158bp
VTNANSFIEADPSLQGLPLWKLIKRTEGSIFNNIAQVYNHNLYWNSMSPD
GGGEPTGVLLEAIEDAFGTFADFKDYFTSAATGHFGSGWAWLILTEDDTL
DVVDSSDAENPISEGFGVPLLTCDVWEHAYYLDYQNLRATYVDGFWEVVN
WDYASSKY
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001189Mn/Fe_SOD
IPR036314SOD_C_sf
IPR019832Mn/Fe_SOD_C
IPR019831Mn/Fe_SOD_N
IPR036324Mn/Fe_SOD_N_sf
IPR019833Mn/Fe_SOD_BS