mRNA_A-nodosum_M_contig912.16.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: D7G382_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G382_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.230e-55 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 1
Query: 16 GGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPA-VVRWDDLQGEARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQMQELLRDLNRRIQKYDQDP 381
GGR RTYLLR+LRDH LWKHPRFW EALM+GVKEQL EGPA RWDDL GEARR+AVARTHNVVFSQLASIAFNMLECGVDGARVRS+VTRKCRESQLGEAQ+QELLRDL+RRI+ D DP
Sbjct: 934 GGRQGRTYLLRELRDHPLWKHPRFWHEALMLGVKEQLQEGPANASRWDDLHGEARREAVARTHNVVFSQLASIAFNMLECGVDGARVRSDVTRKCRESQLGEAQVQELLRDLDRRIRLSDGDP 1056
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: A0A6H5JSR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSR7_9PHAE) HSP 1 Score: 205 bits (522), Expect = 2.390e-55 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 1
Query: 16 GGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVV-RWDDLQGEARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQMQELLRDLNRRIQKYDQDP 381
GGR RTYLLR+LRDH LWKHPRFW EALM+GVKEQL EGPA RWDDL GEARR+AVARTHNVVFSQLASIAFNMLECGVDGARVRS+VTRKCRESQLGEAQ+QELLRDL+RRI+ D DP
Sbjct: 1197 GGRQGRTYLLRELRDHPLWKHPRFWHEALMLGVKEQLQEGPASASRWDDLHGEARREAVARTHNVVFSQLASIAFNMLECGVDGARVRSDVTRKCRESQLGEAQVQELLRDLDRRIRLSDGDP 1319
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: K3WL70_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL70_GLOUD) HSP 1 Score: 80.5 bits (197), Expect = 7.550e-13 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 1
Query: 25 SERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG--------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
+ R YL +++ HA+WK+P FW++AL++ + E+L + P V W+DL +R +AV R HN+VF QL S +MLE V ++ S V C +L E Q
Sbjct: 590 ASRIYLQEEVKKHAIWKNPSFWEKALLLAIGEELQKTPQAVPWEDLPSGVPKHDGLPSREEAVGRVHNIVFGQLGSFTLSMLEFDVPLPQIESFVETMCDAHELTEDQ 697
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: A0A6A3LV30_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LV30_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 1.350e-12 Identity = 42/113 (37.17%), Postives = 62/113 (54.87%), Query Frame = 1
Query: 10 GPGGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG--------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
G G + RTYL +++ HA+WK P FW++AL++ + E+L P W++L +R +AV R HN+VF QL S +MLE V A++ S V C +L E Q
Sbjct: 578 GIGRGATRTYLQEEVKKHAIWKTPSFWEKALLLAIGEELQRTPQPCPWEELPSGGPKHNGLPSREEAVCRVHNIVFGQLGSFTLSMLEFEVPLAQIESFVETMCDAHELTEDQ 690
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: W2RJD7_PHYPN (Uncharacterized protein n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RJD7_PHYPN) HSP 1 Score: 78.2 bits (191), Expect = 3.530e-12 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 10 GPGGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG--------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
G G + RTYL +++ HA+WK P FW++AL++ + E+L P W++L +R +AV R HN+VF QL S +MLE V ++ S V C +L E Q
Sbjct: 392 GIGRGATRTYLQEEVKKHAIWKTPSFWEKALLLAIGEELQRTPQPCPWEELPSGVPKHDGLPSREEAVCRVHNIVFGQLGSFTLSMLEFEVPLTQIESFVETMCDAHELTEDQ 504
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: W2RHM1_PHYPN (Uncharacterized protein n=26 Tax=Phytophthora TaxID=4783 RepID=W2RHM1_PHYPN) HSP 1 Score: 78.2 bits (191), Expect = 4.260e-12 Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 1
Query: 10 GPGGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG--------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
G G + RTYL +++ HA+WK P FW++AL++ + E+L P W++L +R +AV R HN+VF QL S +MLE V ++ S V C +L E Q
Sbjct: 556 GIGRGATRTYLQEEVKKHAIWKTPSFWEKALLLAIGEELQRTPQPCPWEELPSGVPKHDGLPSREEAVCRVHNIVFGQLGSFTLSMLEFEVPLTQIESFVETMCDAHELTEDQ 668
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: H3GE38_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GE38_PHYRM) HSP 1 Score: 76.3 bits (186), Expect = 1.490e-11 Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 1
Query: 10 GPGGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG--------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
G G + RTYL +++ HA+WK P FW++AL++ + E+L P W++L +R +AV R HN+VF QL +MLE V ++ S V C +L E Q
Sbjct: 380 GIGRGATRTYLQEEVKKHAIWKTPSFWEKALLLAIGEELQRTPQPCPWEELPSGVPKHDGLPSREEAVCRVHNIVFGQLGLFTLSMLEFDVSLPQIESFVETMCDAHELTEDQ 492
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: F0VZ10_9STRA (Uncharacterized protein AlNc14C1G157 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0VZ10_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 1.710e-11 Identity = 37/117 (31.62%), Postives = 64/117 (54.70%), Query Frame = 1
Query: 22 RSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQGE--------ARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQMQELLRDL 348
R+ R YL +++ H +WK P+FW++AL++ + E+L V W+ L R +AV+ HN++F QL S +MLE G+ A++ + + C ++L E Q +L + L
Sbjct: 486 RTNRVYLQVEVKQHVIWKSPKFWEKALLLAIGEELQRSSPSVSWECLPSGIPKSENVYTREEAVSHVHNIIFGQLGSFTLSMLEFGIPLAQIETFIETMCDANELTEEQRFQLRKSL 602
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: A0A024G108_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G108_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.060e-11 Identity = 38/117 (32.48%), Postives = 63/117 (53.85%), Query Frame = 1
Query: 22 RSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQGE--------ARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQMQELLRDL 348
R R YL +++ H +WK P+FW++AL++ + E+L + W+ L R +AV+ HN++F QL S +MLE GV A++ S + C ++L E Q +L + L
Sbjct: 486 RINRVYLQVKIKQHPIWKSPKFWEKALLLAIGEELQRSSPSIPWECLPSGIPKSENVYTREEAVSHVHNIIFGQLGSFTLSMLEFGVPLAQIESFIETMCDANELTEEQRFQLRKSL 602
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Match: A0A5D6XF89_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF89_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.390e-11 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1
Query: 31 RTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDDLQG----------EARRDAVARTHNVVFSQLASIAFNMLECGVDGARVRSEVTRKCRESQLGEAQ 324
R YL +++ HA+WK+P FW++AL++ + E+L + P W+DL R +AV R HN+VF QL S +MLE V ++ S V C +L E Q
Sbjct: 617 RMYLQEEVKRHAIWKNPSFWEKALLLAIGEELQKTPQHAPWEDLPSGVPKQDTAGLPTREEAVGRVHNIVFGQLGSFTLSMLEFEVPLPQIESFVETMCDAHELTEDQ 724 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig912.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig912.16.1 >prot_A-nodosum_M_contig912.16.1 ID=prot_A-nodosum_M_contig912.16.1|Name=mRNA_A-nodosum_M_contig912.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=317bp MGPGGRSERTYLLRQLRDHALWKHPRFWDEALMMGVKEQLLEGPAVVRWDback to top mRNA from alignment at A-nodosum_M_contig912:248806..254182+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig912.16.1 ID=mRNA_A-nodosum_M_contig912.16.1|Name=mRNA_A-nodosum_M_contig912.16.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5377bp|location=Sequence derived from alignment at A-nodosum_M_contig912:248806..254182+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig912:248806..254182+ >mRNA_A-nodosum_M_contig912.16.1 ID=mRNA_A-nodosum_M_contig912.16.1|Name=mRNA_A-nodosum_M_contig912.16.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=951bp|location=Sequence derived from alignment at A-nodosum_M_contig912:248806..254182+ (Ascophyllum nodosum dioecious)back to top |