prot_A-nodosum_M_contig910.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig910.1.1
Unique Nameprot_A-nodosum_M_contig910.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length68
Homology
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BLAST of mRNA_A-nodosum_M_contig910.1.1 vs. uniprot
Match: A0A6H5JFC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC0_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 2.260e-6
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:   27 KILLHITRPSRCLDAFSIALNQA-DSSGWYSSTSQLQLASLEF 68
            + +  I  PSRCLDAF +ALNQA D  GWY ST QLQL+SL F
Sbjct:   19 RTVFSIAGPSRCLDAFKVALNQACDGGGWYVSTEQLQLSSLPF 61
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BLAST of mRNA_A-nodosum_M_contig910.1.1 vs. uniprot
Match: D7FT95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT95_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.990e-5
Identity = 25/33 (75.76%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:   35 PSRCLDAFSIALNQADSSGWYSSTSQLQLASLE 67
            PSRCLDA  IALNQA    WY+ST QLQLASLE
Sbjct:    9 PSRCLDALIIALNQASGGEWYTSTMQLQLASLE 41
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig910.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JFC0_9PHAE2.260e-662.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT95_ECTSI1.990e-575.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig910contigA-nodosum_M_contig910:24279..46273 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig910.1.1mRNA_A-nodosum_M_contig910.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig910 24279..46275 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig910.1.1 ID=prot_A-nodosum_M_contig910.1.1|Name=mRNA_A-nodosum_M_contig910.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=68bp
ERARATAPVEGQGRICETTDHQLLQQKILLHITRPSRCLDAFSIALNQAD
SSGWYSSTSQLQLASLEF
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