prot_A-nodosum_M_contig9074.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig9074.2.1
Unique Nameprot_A-nodosum_M_contig9074.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length80
Homology
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BLAST of mRNA_A-nodosum_M_contig9074.2.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 5.700e-12
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0 
Query:    1 RALPKEYDFVRQQSHMNRNFGLTGIKLTAIDMFIDGLSRKSSASAVAGREVAMQA 55
            RAL KEY F+RQ SH +R FGLT I+ T ++M+ID LSRKSS  +VAGR VAM A
Sbjct:  129 RALSKEYYFIRQTSHKDRTFGLTEIRTTMVNMYIDELSRKSSGPSVAGRGVAMSA 183
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9074.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1J1_9PHAE5.700e-1263.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig9074contigA-nodosum_M_contig9074:3474..3713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig9074.2.1mRNA_A-nodosum_M_contig9074.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig9074 3474..3715 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig9074.2.1 ID=prot_A-nodosum_M_contig9074.2.1|Name=mRNA_A-nodosum_M_contig9074.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=80bp
RALPKEYDFVRQQSHMNRNFGLTGIKLTAIDMFIDGLSRKSSASAVAGRE
VAMQATQGHGKKQQYKRGKDNKKRGGGASK
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