mRNA_A-nodosum_M_contig9072.1.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: D8LGV3_ECTSI (2OG-Fe(II) oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI) HSP 1 Score: 273 bits (697), Expect = 6.420e-86 Identity = 162/311 (52.09%), Postives = 190/311 (61.09%), Query Frame = 2
Query: 5 ERIELEDGTGTLLLWPSLFCPSSQARLFKELILDPKL---------------VAPSITGDSARAED--LNGRWTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPKRSAKERRQ----EMEVREEGIHSGIEGVTIPNGGQVRQVLVEGRTTAARRQRRTNGEPAVGSHLKWKEEQSGASNVVCSIPATG-RINLTFRRV 871
E L+ GTG L WPSL ++Q RLF+EL +DP L +G+ ED GRW QRPIK+FGREI QPRLTCFYG G++YRYSGK L+A+ W+GV IQEIL+A A AGV G+FNCVLLNWYR G DYMGWHSDDEKELE+GAAIASVSLG R FQLRRK DH+Q+V+ LG GSLLLMEG TQ +WQHRVPKR+AKE R+ E RE S + GG+ L G + NG G + G+S + S A G RINLTFRRV
Sbjct: 49 ETFHLQSGTGKLRFWPSLLTDAAQRRLFEELTVDPDLRPLDPKAGSSXXXXXXXXXXSGNPGLREDGAARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAAAGAAAGVDPGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDHAQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEEREVRQSPQERREAKALSPLLLSWSGQGGKESSSLKTGESGG-------NGSITGG--------RVGSSLLTSSAGARGGRINLTFRRV 344
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A1S9B515_9BACT (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Hymenobacter sp. CRA2 TaxID=1955620 RepID=A0A1S9B515_9BACT) HSP 1 Score: 148 bits (373), Expect = 1.940e-39 Identity = 77/148 (52.03%), Postives = 94/148 (63.51%), Query Frame = 2
Query: 170 WTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQ---VKLELGVGSLLLMEGDTQRYWQHRVPK 604
W PIK+FGRE++QPRLT ++G G+ YRYSG +L W +Q + +A G FN VLLN YRTG+D MGWH+DDE EL IASVSLG R F+LR + + L+LG GSLLLM+GDTQRYWQH VPK
Sbjct: 38 WRHEPIKLFGREVMQPRLTAWHGDAGVAYRYSGLQLQPEPW--TPALQMLREQVQAATGAA---FNSVLLNLYRTGQDSMGWHADDEPELGPQPVIASVSLGATRRFRLRPRPGSGPAHPPISLDLGSGSLLLMQGDTQRYWQHAVPK 180
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A432ZPI0_9GAMM (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Idiomarina tyrosinivorans TaxID=1445662 RepID=A0A432ZPI0_9GAMM) HSP 1 Score: 147 bits (371), Expect = 4.310e-39 Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 2
Query: 170 WTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
W Q I++FGRE+ PRL +YG GI YRYSG L A +W E+L + + FN VL+NWYR G D MGWHSDDE EL IAS+SLG +R FQ+R KS + Q +L LG GSLL+M G+TQRYWQH+VPK
Sbjct: 47 WQQDTIRLFGREVKIPRLQAWYGAAGIKYRYSGLDLVAKAWT-----PELLELKDQVEALTAARFNSVLVNWYRDGNDSMGWHSDDEPELGNKPVIASLSLGADRRFQMRHKSVPASQ-ELTLGAGSLLVMRGETQRYWQHQVPK 185
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A1N7NHG3_9BACT (Alkylated DNA repair dioxygenase AlkB n=2 Tax=Belliella TaxID=232244 RepID=A0A1N7NHG3_9BACT) HSP 1 Score: 147 bits (371), Expect = 4.700e-39 Identity = 82/202 (40.59%), Postives = 113/202 (55.94%), Query Frame = 2
Query: 5 ERIELEDGTGTLLLWPSLFCPSSQARLFKELILDPKLVAPSITGDSARAEDLNGRWTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPKRS 610
E +++ G + +P F P S +F LI ED+ W Q PI MFG++I+QPRLT YG I Y YSG ++ +W+ + +L + V F VLLN+YR G+D MGWH D+EK L IAS+S G+ER FQ R+ SD S++ + LG GSLLLM+G TQ+YW+H+VPKR+
Sbjct: 11 EPLKIISELGDVDYFPGFFSPPSSQSIFNRLI-----------------EDIT--WHQEPIWMFGKKIMQPRLTALYGDPAIPYSYSGITMETVAWDKL-----LLDIKDKVEHVCNTEFTHVLLNYYRHGQDSMGWHRDNEKSLGNNPVIASLSFGQERVFQFRKYSDKSEKKSITLGNGSLLLMQGATQKYWEHQVPKRA 188
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A355CG02_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=unclassified Microcoleaceae TaxID=2053578 RepID=A0A355CG02_9CYAN) HSP 1 Score: 147 bits (370), Expect = 5.550e-39 Identity = 74/145 (51.03%), Postives = 93/145 (64.14%), Query Frame = 2
Query: 170 WTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
W Q PIK+FG+ ++QPRLT +YG + Y YSG + W P+ +I E FN VLLN YR G+DYMGWHSDDE+ L +GA IASVS GE R F LRR+ +H +V+L LG G L+M GDTQ++WQH VPK
Sbjct: 45 WKQEPIKIFGKSVMQPRLTAYYGTQA--YTYSGVTMQPLPWN--EPLLQIKQEIEPLVNTQ---FNGVLLNLYRNGQDYMGWHSDDERNLAKGAIIASVSFGETRRFILRRRDNHQIKVELNLGDGDFLVMGGDTQKFWQHHVPK 182
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A7X6CB17_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Microcoleus sp. SU_5_3 TaxID=2720482 RepID=A0A7X6CB17_9CYAN) HSP 1 Score: 147 bits (370), Expect = 5.880e-39 Identity = 82/196 (41.84%), Postives = 108/196 (55.10%), Query Frame = 2
Query: 17 LEDGTGTLLLWPSLFCPSSQARLFKELILDPKLVAPSITGDSARAEDLNGRWTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
LE ++ +P LF +LF EL+ + W Q PIK+FG+ +LQPRLT +YG + Y YSG + W +P+ +I E FN VLLN YR G+DYMGWHSDDE L +GA IAS+S GE R F LRR+ +H +++L LG G L+M GDTQ++WQH VPK
Sbjct: 15 LELPNAEVIFYPQLFQQQKSNQLFTELLNQIE-------------------WKQEPIKIFGKSVLQPRLTAYYGTQA--YTYSGVTMQPLPWN--APLLQIKQEIEPLVNTQ---FNGVLLNLYRNGQDYMGWHSDDEHNLAKGAIIASLSFGETRRFILRRRDNHQIKIELNLGDGDFLVMGGDTQKFWQHHVPK 184
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A7C3ZNA2_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Planktothricoides sp. SpSt-374 TaxID=2282167 RepID=A0A7C3ZNA2_9CYAN) HSP 1 Score: 146 bits (368), Expect = 7.060e-39 Identity = 79/173 (45.66%), Postives = 106/173 (61.27%), Query Frame = 2
Query: 92 ELILDPKLVAPSITGDSARAEDLNGR--WTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
E+I P+L P + + DL + W Q PIK+FG+ +LQPRLT +YG +G Y YSG K++ W P+ +I + E FN VLLN YR G+DY+GWHSDDEK+L +GA I S+SLG+ R F RR+ +H + +L L G L M GDTQ++WQH VPK
Sbjct: 5 EVIFYPRLFQPPAS--TQLLTDLLNQIAWKQEPIKIFGKSVLQPRLTAYYGTQG--YTYSGVKMEPLPWN--EPLLQIKAKIEPLVDTE---FNGVLLNLYRDGQDYIGWHSDDEKDLAKGAVIGSLSLGDSRRFIFRRRDNHQIRAELNLSDGDFLTMGGDTQKFWQHHVPK 168
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A3C1RKN0_9CYAN (Alpha-ketoglutarate-dependent dioxygenase AlkB n=2 Tax=unclassified Planktothrix TaxID=2648599 RepID=A0A3C1RKN0_9CYAN) HSP 1 Score: 145 bits (367), Expect = 1.490e-38 Identity = 82/201 (40.80%), Postives = 111/201 (55.22%), Query Frame = 2
Query: 2 GERIELEDGTGTLLLWPSLFCPSSQARLFKELILDPKLVAPSITGDSARAEDLNGRWTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
G+ +EL + L+ +P LF +LF +L+ W Q PIK+FG+ +LQPRLT +YG + Y YSG + W +P+ +I E FN VLLN YR G+DY+GWHSDDE +L EG+ IAS+SLGE R F RR+ +H +V+L L G L+M GDTQ++WQH VPK
Sbjct: 10 GQNLELPNAE--LIFYPRLFQQPESHQLFTDLLTQID-------------------WKQEPIKIFGKSVLQPRLTAYYGTQA--YTYSGVTMQPLPWN--APLLQIKQKIEPLVNTK---FNGVLLNLYRDGQDYIGWHSDDEHDLAEGSIIASLSLGETRRFIFRRRDNHQIKVELNLSNGDFLIMGGDTQKFWQHHVPK 182
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A0M1K085_9CYAN (2OG-Fe(II) oxygenase n=2 Tax=Planktothricoides TaxID=132607 RepID=A0A0M1K085_9CYAN) HSP 1 Score: 145 bits (366), Expect = 2.100e-38 Identity = 83/201 (41.29%), Postives = 112/201 (55.72%), Query Frame = 2
Query: 2 GERIELEDGTGTLLLWPSLFCPSSQARLFKELILDPKLVAPSITGDSARAEDLNGRWTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPK 604
G+++EL + ++ +P LF +LF +L+ W PIK+FG+ +LQPRLT +YG + Y YSG + W +P+ +I E FN VLLN YR G+DYMGWHSDDEKEL +G AIAS+SLGE R F RRK +H + +L+L G L+M GDTQ++WQH VPK
Sbjct: 10 GQKLELYNAE--VIFYPRLFHQPESHQLFTDLLNQIS-------------------WKHEPIKIFGKSVLQPRLTAYYGTKA--YTYSGVTMQPLPWN--APLLQIKEKIEPLVNTQ---FNGVLLNLYRDGQDYMGWHSDDEKELVKGGAIASLSLGETRRFIFRRKDNHQIKFELKLADGDFLVMGGDTQKFWQHYVPK 182
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Match: A0A2T6E314_9GAMM (Fe2OG dioxygenase domain-containing protein n=1 Tax=Saccharospirillum sp. MSK14-1 TaxID=1897632 RepID=A0A2T6E314_9GAMM) HSP 1 Score: 144 bits (363), Expect = 5.330e-38 Identity = 72/148 (48.65%), Postives = 94/148 (63.51%), Query Frame = 2
Query: 170 WTQRPIKMFGREILQPRLTCFYGCEGITYRYSGKKLDASSW-EGVSPIQEILSATEATAGVGKGFFNCVLLNWYRTGEDYMGWHSDDEKELEEGAAIASVSLGEERTFQLRRKSDHSQQVKLELGVGSLLLMEGDTQRYWQHRVPKRS 610
W Q ++++GRE PRL ++G G+ YRYSG+ L A W + V P+ + + T A A FN VL NWYR G+D MGWH+D+E EL +AS+SLG R F+LRR SDH Q V + LG G LLLM+G Q +WQH VPKR+
Sbjct: 36 WRQGQVRVYGREHATPRLESWFGATGVRYRYSGQTLIAEGWPDVVKPLVDAVCNTTAVA------FNAVLANWYRDGDDRMGWHADNEPELGHNPPVASLSLGARRDFRLRRNSDHRQTVSVALGEGDLLLMDGALQHHWQHSVPKRA 177 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9072.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9072.1.1 >prot_A-nodosum_M_contig9072.1.1 ID=prot_A-nodosum_M_contig9072.1.1|Name=mRNA_A-nodosum_M_contig9072.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=231bp MFGREILQPRLTCFYGCEGITYRYSGKKLDASSWEGVSPIQEILSATEATback to top mRNA from alignment at A-nodosum_M_contig9072:17670..20011- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9072.1.1 ID=mRNA_A-nodosum_M_contig9072.1.1|Name=mRNA_A-nodosum_M_contig9072.1.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2342bp|location=Sequence derived from alignment at A-nodosum_M_contig9072:17670..20011- (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9072:17670..20011- >mRNA_A-nodosum_M_contig9072.1.1 ID=mRNA_A-nodosum_M_contig9072.1.1|Name=mRNA_A-nodosum_M_contig9072.1.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=693bp|location=Sequence derived from alignment at A-nodosum_M_contig9072:17670..20011- (Ascophyllum nodosum dioecious)back to top |