prot_A-nodosum_M_contig901.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig901.1.1
Unique Nameprot_A-nodosum_M_contig901.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length76
Homology
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A6G0X7I6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X7I6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 9.860e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            M   PYR  VG+LM  A  TRP +A+  HQL +F DNPGPAHWRAAKRAL+YL  T+  G   GG+
Sbjct: 1475 MASKPYRSLVGSLMYLAMGTRPDLAFPLHQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGS 1540          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A401H3M5_9APHY (Transposon Ty5-1 protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H3M5_9APHY)

HSP 1 Score: 71.6 bits (174), Expect = 5.390e-13
Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKD----LGRTCGGTPG 68
            MR  PYREA+G+LM AA  TRP +A+A   L +F  NPG AHW AAKR L+YL  T++     GRT  G  G
Sbjct:  186 MRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKGTRERWLTYGRTRDGVEG 257          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A6G0W6P6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W6P6_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.050e-12
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            M   PYR  VG+ M  A  TRP +A+   QL +F DNPGPAHWRAAKRAL+YL  T+  G   GG+
Sbjct:  626 MASKPYRSLVGSPMYLAMGTRPDLAFPLQQLSQFLDNPGPAHWRAAKRALRYLNGTRSRGLLLGGS 691          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A6G0W780_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W780_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.060e-12
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            M   PYR  VG+LM  A  TRP +A+   QL +F DNP PAHWRAAKRAL+YL  T+  G   GG+
Sbjct: 1770 MASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLDNPDPAHWRAAKRALRYLNGTRSRGLLLGGS 1835          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 70.9 bits (172), Expect = 1.450e-12
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            MR  PYREA+G+LM AA  TRP +A+A   L +F  NPG AHW AAKR L+YL  T++   T G T
Sbjct: 1255 MRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLT 1320          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A438F880_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438F880_VITVI)

HSP 1 Score: 66.6 bits (161), Expect = 1.690e-12
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKD 58
            M+  PY  AVG+LM A   TRP +AY    LG++  NPG  HWRAAKR ++YL RTK+
Sbjct:    1 MQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKE 58          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A438E550_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E550_VITVI)

HSP 1 Score: 66.6 bits (161), Expect = 1.770e-12
Identity = 31/58 (53.45%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKD 58
            M+  PY  AVG+LM A   TRP +AY    LG++  NPG  HWRAAKR ++YL RTK+
Sbjct:   32 MQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRVMRYLQRTKE 89          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: M2QFN1_CERS8 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2QFN1_CERS8)

HSP 1 Score: 70.1 bits (170), Expect = 2.400e-12
Identity = 32/65 (49.23%), Postives = 44/65 (67.69%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGG 65
            M+  PYRE +GAL   + ++RP +++A + L +FN +PGP HWRAAKR LQYL  T+D     GG
Sbjct:  165 MKRRPYRELLGALTWISVISRPDISFAVNNLAQFNADPGPKHWRAAKRILQYLTGTRDYRLVLGG 229          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A6G0WNM5_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WNM5_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.590e-12
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            M   PYR  VG+LM  A  TRP +A+   QL +F +NPGPAHWRAAKR L+Y+  T+  G   GG+
Sbjct:  285 MASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLENPGPAHWRAAKRVLRYINGTRSRGLLLGGS 350          
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Match: A0A6G0W2A7_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W2A7_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 2.630e-12
Identity = 34/66 (51.52%), Postives = 43/66 (65.15%), Query Frame = 0
Query:    1 MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRALQYLWRTKDLGRTCGGT 66
            M   PYR  VG+LM  A  TRP +A+   QL +F +NPGPAHWRAAKR L+Y+  T+  G   GG+
Sbjct:  361 MASKPYRSLVGSLMYLAMGTRPDLAFPLQQLSQFLENPGPAHWRAAKRVLRYINGTRSRGLLLGGS 426          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig901.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0X7I6_9STRA9.860e-1557.58Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A401H3M5_9APHY5.390e-1352.78Transposon Ty5-1 protein n=1 Tax=Sparassis crispa ... [more]
A0A6G0W6P6_9STRA1.050e-1254.55Integrase catalytic domain-containing protein n=1 ... [more]
A0A6G0W780_9STRA1.060e-1254.55Integrase catalytic domain-containing protein n=3 ... [more]
A0A401GQU1_9APHY1.450e-1254.55Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A438F880_VITVI1.690e-1253.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A438E550_VITVI1.770e-1253.45Retrovirus-related Pol polyprotein from transposon... [more]
M2QFN1_CERS82.400e-1249.23Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0WNM5_9STRA2.590e-1251.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6G0W2A7_9STRA2.630e-1251.52Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig901contigA-nodosum_M_contig901:45552..45779 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig901.1.1mRNA_A-nodosum_M_contig901.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig901 45468..46046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig901.1.1 ID=prot_A-nodosum_M_contig901.1.1|Name=mRNA_A-nodosum_M_contig901.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=76bp
MRVTPYREAVGALMSAATMTRPVVAYAAHQLGKFNDNPGPAHWRAAKRAL
QYLWRTKDLGRTCGGTPGSCTKLSA*
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