mRNA_A-nodosum_M_contig9.48.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: D7G9G8_ECTSI (Putative deacetylase sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G8_ECTSI) HSP 1 Score: 459 bits (1180), Expect = 1.960e-146 Identity = 235/346 (67.92%), Postives = 269/346 (77.75%), Query Frame = 2
Query: 1700 GLLKTYPSFAMYALKSSRSADPLPLPLVTIPIGHVXXXXXXXXXXHKSPLLLSIPLITIIGVQKGGTTSLRGNLMTHPLVSGMPNEVHFFDRGLTSYPRLGKWPGDGREKELGPGIVGRILAEYAKACMEYGKPTNK---NTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEFRGACTSH-RQSFDSGFFSKGGKY 2725
GLLK Y SFA YAL+SS S+DPLPLPLV PIG +S LLSIPLITIIGVQKGGTT+LR NL+THPLV+GMPNEVHFFD+ YP+LG W GDGREKEL PG +GRIL+EYAK C+E GKP K + + +SSGVIVESSPRYILSPIAPYRM+MVLP A+LVVVLRDPTDRYFS LRMVMCK +PDP + SLEE ++THFH PG AK Y++RAEA+Y PY CRGENATS DL CF+ M HNPLHRGLYADQLERWFRV+D+SQILV+DSAEMF +FT TVA VA + GLP+H+FEYD KHEF+GAC R FF+ GG+Y
Sbjct: 94 GLLKQYTSFAKYALESSNSSDPLPLPLVA-PIGE------------RS--LLSIPLITIIGVQKGGTTNLRRNLLTHPLVTGMPNEVHFFDQDPDIYPKLGHWQGDGREKELSPGAIGRILSEYAKTCLEEGKPKKKPAWHKNVAAMSSGVIVESSPRYILSPIAPYRMRMVLPRAKLVVVLRDPTDRYFSQLRMVMCKTEPDPGYMSLEEQISTHFHPPGQAKGYIKRAEAAYNPYGERCRGENATSADLWNCFKAMATHNPLHRGLYADQLERWFRVYDKSQILVIDSAEMFVNFTETVAVVAEWAGLPEHEFEYD-KHEFKGACRDKIRYHNQPDFFADGGRY 423
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: A0A6H5JDR2_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDR2_9PHAE) HSP 1 Score: 348 bits (894), Expect = 9.860e-104 Identity = 191/382 (50.00%), Postives = 245/382 (64.14%), Query Frame = 2
Query: 1706 LKTYPSFAMYALKSSRSADP-LPLPLVTIPIGHVXXXXXXXXXXHKSP-LLLSIPLITIIGVQ---KGGTTSLRGNLMTHPLVSGM-PNEVHFFDR-GLTSYPRLG-KWPGDGREKE-LGPGIVGRILAEYAKACMEYGKPTNKNTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEFRGA-CTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMWQ 2821
LK Y SF YA + S S + LP+P+V P K P SIPL IIG Q KGGT +LR +L+THP +SG+ E HFFD TS P+ +W GDGR L G +L+ YA ME P ++T VES+P Y P+APYRMKMVLP ARLV++LRDPT+RYFSHLRM+MC + F LE+ T+FH PG KEYLER EASY+PY PLCRGE A ++DL+ C++ M H+PLHRGLYADQLERWFRV+ RSQILV++S+EMF +FTGT+ +VA GLP H +EYD +H+ A C + F++GG+Y+ MLED+ + ++WYRPHN+RL++LLGREM W+
Sbjct: 176 LKRYESFEAYATEQSASGNAILPVPIVRPP--------------GKGPEASRSIPLAIIIGTQASAKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFTSDPKSRHEWRGDGRGGAGLNSSAAGEVLSAYADRAMEAVDPRKRDTM-------ATVESTPLYFFYPLAPYRMKMVLPAARLVLILRDPTERYFSHLRMMMCWTRDSETFDHLEKRQKTYFHIPGRVKEYLERGEASYKPYTPLCRGEEARAKDLLRCWKAMVTHDPLHRGLYADQLERWFRVYPRSQILVLESSEMFGNFTGTLDKVARHIGLPPHGYEYDSRHQHASAPCERNHPEL----FAEGGRYQKMLEDQRVLQEWYRPHNERLYRLLGREMPWE 532
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: D7FST9_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST9_ECTSI) HSP 1 Score: 308 bits (790), Expect = 8.760e-89 Identity = 172/348 (49.43%), Postives = 218/348 (62.64%), Query Frame = 2
Query: 1706 LKTYPSFAMYALKSSRSADP-LPLPLVTIPIGHVXXXXXXXXXXHKSP-LLLSIPLITIIGVQKGGTTSLRGNLMTHPLVSGM-PNEVHFFDR-GLTSYP--RLGKWPGDGREKE-LGPGIVGRILAEYAKACMEYGKPTNKNTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEFRGA-CTSHRQSFDSGFFSKGGKY 2725
L+ Y SF YA + S S + LP+P+V P K P SIPL IIG QKGGT +LR +L+THP +SG+ E HFFD S P + +WPGDGR L P G +L+ YA M+ P+ ++T VESSP Y+ P+APYRM+MVLP ARLV++LRDPT+RYFSHLRM+MC + F LEE + T+FH PG KEYLE+ EASY+PY PLCRGE A ++DL+ C++ M H+PLHRGLY DQLERW RV+ RSQILVV+S+EMF DFTGT+ +VA GLP H F YD +H+ A C H F++GG+Y
Sbjct: 234 LRRYESFEAYATEQSASGNAILPVPIVRPP--------------GKGPEASRSIPLAIIIGTQKGGTQNLRSHLLTHPSLSGLRQKEAHFFDWFWFPSDPNKKRHEWPGDGRGGAGLNPSAAGEVLSAYADRAMKAVDPSKRDTM-------ATVESSPLYLFFPLAPYRMRMVLPAARLVLILRDPTERYFSHLRMMMCGTRDGETFDQLEERLETYFHIPGRVKEYLEQGEASYKPYTPLCRGEGARAKDLLRCWKAMVTHDPLHRGLYVDQLERWLRVYPRSQILVVESSEMFGDFTGTLNQVARHIGLPPHDFSYDSRHQHASAPCERHHPEL----FAEGGRY 556
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: D7G3W4_ECTSI (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W4_ECTSI) HSP 1 Score: 290 bits (743), Expect = 1.620e-86 Identity = 140/227 (61.67%), Postives = 167/227 (73.57%), Query Frame = 2
Query: 2141 VIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYD-PKHEFRGACTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMW 2818
V VESSPRYI +P+APYRM MV P ARLV+VLRDPTDRYFS LRM MC GK + F ++E T FHSPG A Y++ EA+Y+PY PLCRGENAT+EDL C+R H+PL RGLYADQLERWFRVFD+SQIL+VDSA M +D G +A VAA GLP F+ D P G C + + D FF + G+Y+ MLE+E+LFR+WYRPHN+RLFKLLGR MMW
Sbjct: 12 VTVESSPRYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKTNQTFERVQENQATWFHSPGDAAGYIDGGEATYEPYTPLCRGENATTEDLRDCYRAQLPHHPLLRGLYADQLERWFRVFDKSQILIVDSANMMEDLPGVLADVAAHIGLPGSDFDSDRPVQHSTGLCPALGRGEDPDFFGEEGRYDKMLEEEDLFREWYRPHNERLFKLLGRSMMW 238
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: A0A6H5KMM8_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMM8_9PHAE) HSP 1 Score: 232 bits (592), Expect = 4.520e-66 Identity = 119/222 (53.60%), Postives = 146/222 (65.77%), Query Frame = 2
Query: 2165 YILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTH---FHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEFR-GACTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMW 2818
Y+ P+APYRMKMV P ARLVV+L+DPT RYFSH RM MC GK D + + VN FH+PG A YL R + YAPLCRG NA DL CF + NPL RGLYADQLERWF VF RSQILV+DS+E+++DF T+ R A GLP H F Y+ + GAC +R F F + G+Y+ MLE E+LFRDWYRPHN+RL+ L+G++ W
Sbjct: 2 YVFYPLAPYRMKMVQPHARLVVILKDPTARYFSHARMTMC-GKIDE--SKPKTSVNYRLRAFHAPGRAAGYLNRGTDKVERYAPLCRGVNAEPGDLAKCFMAINGQNPLLRGLYADQLERWFAVFSRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYNSDFQHSTGACKENRPQF----FGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDFKW 216
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: D7G3W5_ECTSI (Similar to heparan sulfate sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3W5_ECTSI) HSP 1 Score: 234 bits (597), Expect = 1.160e-64 Identity = 150/391 (38.36%), Postives = 199/391 (50.90%), Query Frame = 2
Query: 1670 NHQLMLQQDKG--LLKTYPSFAMYALKSSRSADPLPLPLVTIPIGHVXXXXXXXXXXHKSPLLLSIPLITIIGVQKGGTTSLRGNLMTHPLVSGMPN-EVHFFDRGLTSYPRLGKWPG---DGREKELGPGIVGRILAEYAKACME-YGKPTNKNTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEF-RGACTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMW 2818
N +++ +D G ++ Y SFA YA + S +PLP+P+VT G + P+ S+PL TIIGVQKGGT +LR +L+ HPL+SG+P E HFFDR +YP LG+WPG D R +L G +L Y+ A M G P + V V+SSP YI P+APYRMKMV P ARLVV+L+DPT R + V +G D R +QLERWF VF RSQILV+DS+E+++DF T+ R A GLP H F YD + GAC +R F F + G+Y+ MLE E+LFRDWYRPHN+RL+ L+G+++ W
Sbjct: 69 NKPVVVVRDAGESFVRHYNSFAAYAAEMLNSTEPLPVPVVTPNDGR------------RPPM--SLPLGTIIGVQKGGTQNLRSHLLQHPLLSGVPGTEAHFFDRNPDTYPSLGEWPGNTGDARRAKLPASAAGEVLELYSNATMRTIGAPDE----LEEAGVTVTVDSSPMYIFYPLAPYRMKMVQPHARLVVILKDPTARKIA----VFLRGFSD--------------------------------------------------------------RKRQPNQLERWFAVFPRSQILVIDSSELYRDFLPTLERAARHLGLPPHDFYYDSDFQHGTGACKDNRPQF----FGEDGRYKKMLEQEQLFRDWYRPHNERLYSLIGKDLKW 371
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: D8LJ80_ECTSI (N-deacetylase/N-sulfotransferase (Heparan glucosaminyl) 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ80_ECTSI) HSP 1 Score: 202 bits (513), Expect = 3.340e-52 Identity = 123/380 (32.37%), Postives = 188/380 (49.47%), Query Frame = 2
Query: 1700 GLLKTYPSFAMYALKSSRSADPLPLPLVTIPIGHVXXXXXXXXXXHKSPLLLSIPLITIIGVQKGGTTSLRGNLMTHPLVSGMPNEVH------FFDRGLTSYPRLGKWPGDGREKELGPGIVGRILAEYAKACMEYGKPTNKNTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTL-HNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDHKFEYDPKHEFRGACTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMW 2818
G L+ + SF + +S P +P+V + HV ++P + I+G ++ GT++L L HP V M E F + ++P+ +WPGD EKEL ++G++L E+A+ + ++ P L + + SP Y S +APYR+K+ +P ++VVVLRDPT+RY+S LR +C + D E + + + P +K+YL A Y PY C GE A++ DL C + + H PL +GLYA QLERW R F SQ+LVV + ++F++ T A VA F GL ++ + +C R+ + Y E E R WY HND + +LLG EM W
Sbjct: 124 GGLRRFESFEEFVERSRAEDGPAAMPVVPLDGKHV-----------------TLPSVIIVGARRSGTSTLFSMLSQHPAVGSMAPEPRPELSCGFMAQDPETFPQEAEWPGDNLEKELPASVLGKLLEEFARP-YTVSESRHEGVDAPNLVTTAV---SPGYFASHLAPYRLKLAMPDVKIVVVLRDPTNRYYSELREALCADEVD------WEDIMSSYAMPAASKDYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAPQLERWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHTFFEFAVDREASCDPRRKKNPEVVTA----YSKRKESEPQLRKWYAEHNDMVSELLGEEMGW 472
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: A0A6H5KC11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC11_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.870e-48 Identity = 87/135 (64.44%), Postives = 101/135 (74.81%), Query Frame = 2
Query: 2141 VIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQI 2545
V VESSP YI +P+APYRM MV P ARLV+VLRDPTDRYFS LRM MC GK + F ++E FHSPG A Y++ AEA+Y+PY PLCRGE AT+ DL C R H+PL RGLYADQLERWFRVFD+SQ+
Sbjct: 12 VTVESSPTYIFNPLAPYRMGMVQPFARLVLVLRDPTDRYFSQLRMTMCSGKANQTFEGVKEAA--WFHSPGDAAGYIDGAEATYEPYTPLCRGEKATAMDLRKCSRAQRRHHPLFRGLYADQLERWFRVFDKSQV 144
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: A0A6H5K695_9PHAE (Sulfotransfer_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K695_9PHAE) HSP 1 Score: 178 bits (452), Expect = 2.980e-46 Identity = 104/279 (37.28%), Postives = 150/279 (53.76%), Query Frame = 2
Query: 1988 YPRLGKWPGDGREKELGPGIVGRILAEYAKACMEYGKPTNKNTPIPVLSSGVIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPYAPLCRGENATSEDLMTCFRRMTL-HNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLP-DHKFEYDPKHEFRGACTSHRQSFDSGFFSKGGKYEAMLEDEELFRDWYRPHNDRLFKLLGREMMW 2818
+P +WPGD EKEL ++G++L E+A+ + + P+L + + SP Y S +APYR+K+ +P ++VVVLRDPTDRY+S LR +C + D E + + F PG K YL A Y PY C GE A++ DL C + + H PL +GLYA QL+RW R F SQ+LVV + ++F++ T A VA F GL +H F ++ + +C R++ + Y E E R WY HND + +LLG EM W
Sbjct: 16 FPHDAEWPGDNLEKELPASVLGKLLEEFARP-YTVSESRQEGIDGPILVTTAV---SPGYFSSHLAPYRLKLAIPDVKVVVVLRDPTDRYYSELREALCADEVD------WEDIMSSFAMPGACKGYLSDAVLDYSPYDKRCLGEGASAADLWACQKGLEKSHTPLLKGLYAAQLDRWQRAFGESQVLVVQAEKLFQEPEKTAAEVAKFAGLAAEHSF-FEFAVDREASCDPRRKNPEVVT-----AYSKRKESEPQLRKWYAEHNDIVSELLGEEMGW 278
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Match: A0A835YYW0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW0_9STRA) HSP 1 Score: 121 bits (303), Expect = 8.390e-27 Identity = 90/263 (34.22%), Postives = 120/263 (45.63%), Query Frame = 2
Query: 1862 PLITIIGVQKGGTTSLRGNLMTHPLVSGMPNEVHFFDRGLTSYPRLGKWPGDGREKEL----GPGIVGRILAEYAKACMEYGKPTNKNTPIPVLSSG--VIVESSPRYILSPIAPYRMKMVLPGARLVVVLRDPTDRYFSHLRMVMCKGKPDPRFASLEEMVNTHFHSPGGAKEYLERAEASYQPY-APLCRGENATSEDLMTCFRRMTLHNPLHRGLYADQLERWFRVFDRSQILVVDSAEMFKDFTGTVARVAAFGGLPDH 2629
PL IIG QK GTT+LR NL++HP ++G E HFFD +P G+ GD + G G + A + + + ++ G + ++SP Y L P A R + P ARLV+++RDP +RYFS MV C + + + FH+ GGA A+Y A C G C N L RGLYAD L RW R F +LVVDSA F+ + V AF GLP H
Sbjct: 9 PLFIIIGAQKAGTTNLRHNLLSHPSLAGSRTETHFFD---WHFPAAGEG-GDADDATTAIAEGGGAAAALRAYSRRLLQGRAGLVRAASDVRRVARGRAFVFDTSPSYYLIPAAAARAAALRPRARLVLLVRDPVERYFSAAHMVTC-------WNATVGLPTEAFHATGGAAARAAEFAAAYNASDADGCMGLPLRGG---RCQWGAFTGNALARGLYADALRRWLRAFPARNVLVVDSARYFRATQAVLDEVLAFLGLPPH 257 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig9.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig9.48.1 >prot_A-nodosum_M_contig9.48.1 ID=prot_A-nodosum_M_contig9.48.1|Name=mRNA_A-nodosum_M_contig9.48.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=381bp MLQQDKGLLKTYPSFAMYALKSSRSADPLPLPLVTIPIGHVGHIGHIGRIback to top mRNA from alignment at A-nodosum_M_contig9:907583..920583+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig9.48.1 ID=mRNA_A-nodosum_M_contig9.48.1|Name=mRNA_A-nodosum_M_contig9.48.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=13001bp|location=Sequence derived from alignment at A-nodosum_M_contig9:907583..920583+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig9:907583..920583+ >mRNA_A-nodosum_M_contig9.48.1 ID=mRNA_A-nodosum_M_contig9.48.1|Name=mRNA_A-nodosum_M_contig9.48.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1143bp|location=Sequence derived from alignment at A-nodosum_M_contig9:907583..920583+ (Ascophyllum nodosum dioecious)back to top |