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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1564 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 822 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870328.014681-UTR-A-nodosum_M_contig897:230198..230761 | 1680870328.014681-UTR-A-nodosum_M_contig897:230198..230761 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig897 230199..230761 - |
| 1680870328.0551896-UTR-A-nodosum_M_contig897:232081..232260 | 1680870328.0551896-UTR-A-nodosum_M_contig897:232081..232260 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig897 232082..232260 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680870328.0329168-CDS-A-nodosum_M_contig897:230761..231454 | 1680870328.0329168-CDS-A-nodosum_M_contig897:230761..231454 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig897 230762..231454 - |
| 1680870328.045791-CDS-A-nodosum_M_contig897:231952..232081 | 1680870328.045791-CDS-A-nodosum_M_contig897:231952..232081 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig897 231953..232081 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig897.26.1 >prot_A-nodosum_M_contig897.26.1 ID=prot_A-nodosum_M_contig897.26.1|Name=mRNA_A-nodosum_M_contig897.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=274bp
MDGLFIPLRRPSLRDHPLPIRFNLVHKKGFGMNFPVKSAFHVEAMRVRED
QSGGVGTDNKDVGDRDERGEIEDEGNGQENVDMADEEVGKAVLAKAERES
LKLKKDAIHTRSFCKEKAPLIIWNDTLQTFGGSNNGSVGDNAIADSCSGS
VSGIPGGAGVKSMMDSGGRKRSESGGAGAGSGATGSRIPRTMTANAAKKA
AYVGMAALTAKLQESVDAERLASAPTIEDLADAILRLQGKLNTLSANAHA
LVRAGFTRELDKAVAELTARLGA* back to topmRNA from alignment at A-nodosum_M_contig897:230199..232260- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig897.26.1 ID=mRNA_A-nodosum_M_contig897.26.1|Name=mRNA_A-nodosum_M_contig897.26.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=2062bp|location=Sequence derived from alignment at A-nodosum_M_contig897:230199..232260- (Ascophyllum nodosum dioecious)
CTCGGGGGAACAAATTATGTAGAATGTAGAATCTGTTTATACCCCGCTTG
TAGAATCTGTCCATGGACATATTCCATCGACAGATCCTATTTTGTTTGCG
GTCCAAACGTCCGCCGAGGAAATCCAGTCTAATTCGACAGTCACGCCTCG
GAAATCGTTAGGAAACCTAGTAGCTGGCAATGGATGGACTCTTCATCCCA
TTGAGACGGCCGTCGCTACGTGACCATCCACTGCCGATACGGTTCAACTT
GGTCCACAAGAAGGGGTTCGGCATGAATTTTCCGGTTAAAAGCGCCTTCC
ATGTCGAGGTTGAAGTGGTGCTCTGTGTTTACCTTCATACCCGCGCGCAG
CTACAACTTAATCGTATACACAGCGTAGTTTGCCGCGATCGCGTAGATCG
GTCAGCTATCTCACGGAATCAGACGCGATCGACTTTATTGTCTCACCGAA
CAGCAGCAAGCATCTTGATTCGAACTCCACTACAACGATGGCAGACAACC
CGTTACGCTGCCCATTTTTCTCTGTACGGACCTAAACTTCGCACGCCTCA
TGCCACTAAGGGAGAGCGTATGTCATAGGTGCTATCACGGGTGAAGAGTG
CACGACTGCTGTTGTTTAGGAGACCATTTCCATCTGAACAGGAATAAAGC
GAGGATAAAGAGGAAGATTAGCAAACGTCGACGTAACATAGAATGTGGAG
GTATGCTACGCGTGCGCATGGGTATTCTACAGACGCTCATGTGTCTTCGA
CCGAACCCCCTCCCCACACACACACGTATACCTTGTCCTGCATCCGCCTT
GTACAGGCGATGCGCGTGCGGGAAGACCAAAGCGGTGGCGTTGGCACGGA
CAACAAGGATGTAGGTGATCGAGACGAACGCGGCGAGATTGAGGACGAGG
GTAACGGCCAGGAAAATGTTGACATGGCTGATGAAGAGGTCGGCAAGGCT
GTACTGGCCAAAGCAGAGCGGGAATCGCTGAAGCTCAAGAAGGATGCGAT
CCACACACGGTCATTCTGCAAAGAAAAGGCCCCGCTAATAATCTGGAATG
ACACCTTGCAGACGTTTGGCGGGAGTAACAACGGATCCGTTGGGGATAAC
GCTATCGCCGACAGCTGCTCGGGCTCGGTCTCTGGCATCCCCGGCGGCGC
CGGTGTGAAATCGATGATGGATAGTGGGGGCAGGAAAAGGAGCGAGAGCG
GAGGGGCCGGGGCCGGGAGCGGGGCCACCGGTTCGAGGATTCCAAGGACC
ATGACAGCCAACGCGGCCAAGAAGGCCGCCTACGTAGGCATGGCTGCCCT
GACGGCGAAATTGCAGGAATCAGTAGATGCCGAAAGGTTGGCGAGCGCCC
CAACCATCGAAGATCTTGCAGATGCCATTTTGAGGCTGCAGGGGAAGCTG
AATACTCTCTCCGCCAACGCCCACGCCCTCGTGCGAGCGGGGTTTACACG
GGAGCTAGACAAGGCTGTGGCGGAGTTGACGGCTCGGCTCGGTGCGTGAC
TGTTACTTTGCGAGGGGGCGGGGAGGGGTGAGTGCACACCGCGTCTCTGG
TTAGCAGGTCAGCGGCGGTGCAGCAGTAGCGTACATGTTTAGCGTATATG
TCATTTTTGTCTGACAGCGCAACCGGGGAAGCCGGGCCTGCGTCCCTTAA
CCCCCTTCGCGGCTGAATTAGAGATCAGTCAATGCGATAAGAACAGCATC
AAGTGCGGGATTGCTGCGGAAACCACAAGCTTGTGTGTTGGTATCATGAG
TGTGAAGTGATTGAGTTGTCAAACCTCTACGCATATTATGTAGGAAAGGT
CTAATCACAGATGGCGGTTTCTCTTTTTAACTAGGGAAACGATCGTTCAG
TAGTCAAAAGTATGGTGCCCGGTCAAGGATCGTTTCACGGGAGGGGCCAA
GAACGGTGGGTTGGCATTTTATCAGTATGAACGAGGGAAATGGCCGGGGT
ATTTGTTGGAATAATGGGTTGGAAGGTGTGAATTTCAAGGACTTGGTCCC
TCTTTTCACAGCCCAACGCACGGCGATGTTTGAACAGGTCGGGTACATGT
ACGGGCAGTTGC back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig897:230199..232260- >mRNA_A-nodosum_M_contig897.26.1 ID=mRNA_A-nodosum_M_contig897.26.1|Name=mRNA_A-nodosum_M_contig897.26.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at A-nodosum_M_contig897:230199..232260- (Ascophyllum nodosum dioecious)
ATGGATGGACTCTTCATCCCATTGAGACGGCCGTCGCTACGTGACCATCC
ACTGCCGATACGGTTCAACTTGGTCCACAAGAAGGGGTTCGGCATGAATT
TTCCGGTTAAAAGCGCCTTCCATGTCGAGGCGATGCGCGTGCGGGAAGAC
CAAAGCGGTGGCGTTGGCACGGACAACAAGGATGTAGGTGATCGAGACGA
ACGCGGCGAGATTGAGGACGAGGGTAACGGCCAGGAAAATGTTGACATGG
CTGATGAAGAGGTCGGCAAGGCTGTACTGGCCAAAGCAGAGCGGGAATCG
CTGAAGCTCAAGAAGGATGCGATCCACACACGGTCATTCTGCAAAGAAAA
GGCCCCGCTAATAATCTGGAATGACACCTTGCAGACGTTTGGCGGGAGTA
ACAACGGATCCGTTGGGGATAACGCTATCGCCGACAGCTGCTCGGGCTCG
GTCTCTGGCATCCCCGGCGGCGCCGGTGTGAAATCGATGATGGATAGTGG
GGGCAGGAAAAGGAGCGAGAGCGGAGGGGCCGGGGCCGGGAGCGGGGCCA
CCGGTTCGAGGATTCCAAGGACCATGACAGCCAACGCGGCCAAGAAGGCC
GCCTACGTAGGCATGGCTGCCCTGACGGCGAAATTGCAGGAATCAGTAGA
TGCCGAAAGGTTGGCGAGCGCCCCAACCATCGAAGATCTTGCAGATGCCA
TTTTGAGGCTGCAGGGGAAGCTGAATACTCTCTCCGCCAACGCCCACGCC
CTCGTGCGAGCGGGGTTTACACGGGAGCTAGACAAGGCTGTGGCGGAGTT
GACGGCTCGGCTCGGTGCGTGA back to top
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