prot_A-nodosum_M_contig897.16.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig897.16.1
Unique Nameprot_A-nodosum_M_contig897.16.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length563
Homology
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BLAST of mRNA_A-nodosum_M_contig897.16.1 vs. uniprot
Match: D8LEJ5_ECTSI (GRIP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ5_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 2.870e-27
Identity = 116/313 (37.06%), Postives = 153/313 (48.88%), Query Frame = 0 
Query:    1 DFGATIAALQDQLREVTRAKDDAEKRAEMAAA-------------ASTVPGKRVEEGRE--YETVAE------------------------------------------------------LKTQLEKKQAENESIASRLNELAQRYRALQQED---------------EARKAEYNSAAVERVADMERQLAASDGKAVDLARRCEVAEAGHERIEGSLKIALSRVVGLDSSTTSA------------TASVAAVEKELRVAREXXXXXXXXXDETSTKLESKTADFQNILGKAKDLADRYRTLQALAEGSAS 217
            DFGATIAALQ QLREVT+ KD+A +RAE A A              +T   +++EE  +   E +AE                                                      L+ QL+ KQAEN+ + +RL ELAQR+RALQQE                 A  A   S   E++AD ER++ A+D +A +LARRCE AEA H R   SLK A+ R+  LD++  +              ASVA++  EL+ +RE         +E ST+LE+KTADF+ +LG+ KDLA RYR LQA AEGSAS
Sbjct:  258 DFGATIAALQTQLREVTQEKDEAVQRAEAAVAREGGFVAGGGEDGVATAAKEKLEEQEKAHQEALAEKQSQNEQLVQKVRQLLTTCRSLKEQVAVXXXXXXXXXXXXXXXXXQAGEEEGGGLQAQLDLKQAENDKLMARLRELAQRFRALQQEQLRSAGXXXXXXXXXXAATAAVAPSDVAEQLADAERRVTAADERAAELARRCEEAEAEHGRASESLKEAVERLAALDATAAAGGGERTEKTVAALEASVASLAGELKASREEK-------EEVSTQLEAKTADFEKMLGRTKDLAGRYRELQAQAEGSAS 563
[Close]
BLAST of mRNA_A-nodosum_M_contig897.16.1 vs. uniprot
Match: A0A6H5K2N6_9PHAE (GRIP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2N6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 3.290e-15
Identity = 75/196 (38.27%), Postives = 105/196 (53.57%), Query Frame = 0 
Query:   53 LKTQLEKKQAENESIASRLNELAQRYRALQQEDEARKAEYN----------------SAAVERVADMERQLAASDGKAVDLARRCEVAEAGHERIEGSLKIALSRVVGLDSSTTSA------------TASVAAVEKELRVAREXXXXXXXXXDETSTKLESKTADFQNILGKAKDLADRYRTLQALAEGSASELA 220
            L+ QL+ KQAEN+ + +RL +LAQRYRALQQE +                       S   E++ D ER++ A+D +A +LARRCE AEA H R   SLK A+ R+  LD++  +              A VA++  EL+ +RE         ++ ST+LE+KTADF+ ++G    L        A AEGSASELA
Sbjct:  383 LQAQLDLKQAENDKLMARLRDLAQRYRALQQEHQRPAGXXXXXXXXXXXXXXXXVVPSDVAEQLGDAERRVTAADERAAELARRCEEAEAEHRRASESLKEAVERLAALDATAAAGGGERMEETVAALEARVASLAGELKASREEK-------EDVSTQLEAKTADFEKMVGYLFFLLSL-----AQAEGSASELA 566
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig897.16.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEJ5_ECTSI2.870e-2737.06GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K2N6_9PHAE3.290e-1538.27GRIP domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 325..356
NoneNo IPR availableCOILSCoilCoilcoord: 233..278
NoneNo IPR availableCOILSCoilCoilcoord: 297..317
NoneNo IPR availableCOILSCoilCoilcoord: 396..437
NoneNo IPR availableCOILSCoilCoilcoord: 156..190
NoneNo IPR availableCOILSCoilCoilcoord: 50..91
NoneNo IPR availableCOILSCoilCoilcoord: 6..33
NoneNo IPR availableCOILSCoilCoilcoord: 470..539
NoneNo IPR availableGENE3D1.20.5.170coord: 469..562
e-value: 4.5E-5
score: 25.2
NoneNo IPR availableSUPERFAMILY57997Tropomyosincoord: 485..558

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig897contigA-nodosum_M_contig897:123498..129651 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig897.16.1mRNA_A-nodosum_M_contig897.16.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig897 123497..129651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig897.16.1 ID=prot_A-nodosum_M_contig897.16.1|Name=mRNA_A-nodosum_M_contig897.16.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=563bp
DFGATIAALQDQLREVTRAKDDAEKRAEMAAAASTVPGKRVEEGREYETV
AELKTQLEKKQAENESIASRLNELAQRYRALQQEDEARKAEYNSAAVERV
ADMERQLAASDGKAVDLARRCEVAEAGHERIEGSLKIALSRVVGLDSSTT
SATASVAAVEKELRVAREELREAKDEKDETSTKLESKTADFQNILGKAKD
LADRYRTLQALAEGSASELADTLQREEQHFAEASAMREELARVRLEAEEA
RAALASELVSAEEHLAAATARAEEFAEDLCVTRAREVYVTRRVEELEAAE
EKQRAVVEAEMESVRRELDRACGAKQDAVGEIERLAAQLESAQDGASSEA
ATLREQMAAAEGARQASVLRATSLEEEVSGLRTSAAEAAVAAKTVEVEAR
EEAARLSRELDMATEAAAAEEQRAKILAAELANVKAAAVTTEESTKAAVA
EAVERAEVEREKAVANLKTIRILEEQTMMARRTAEEAQSRLEAMRTEAEA
LREKAQTSEGRVAKLQALVTELETKLVELEASEQSSRERYDVVSSKLKEL
ISRYKELRDSALA
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