prot_A-nodosum_M_contig896.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig896.17.1
Unique Nameprot_A-nodosum_M_contig896.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length432
Homology
BLAST of mRNA_A-nodosum_M_contig896.17.1 vs. uniprot
Match: A0A6H5KHE0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHE0_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 5.990e-49
Identity = 141/426 (33.10%), Postives = 228/426 (53.52%), Query Frame = 0
Query:    3 PYEIGTDDTPISGQLFADIIISLMSKSPQGPSEEEGRLLIFIKNQGTSPDE-EGKLGRTPRVYASQHRLPVWLRFIIHRLEVDPP---GDTSTERHRGSFDVDRRHMAELPLGSSERDILR--DVLKSNSDPQSARFNRKHYREKMDSTDKAEALRKGYDKLD-SSPFAEDMPEEDPVKMGLWMVGKISAELAVQAFSGTLLFDVYQVGMGIADIWMRWRGRKEAKGAWRAFAIAYRQVLTCAWTLDK---LTEDP---YAPSLATDAKKSLKDWTEAIKGAVMRVREEIERAIEGHRVQQSHLLNLMYRSTAELMVKHSEINKEISQLQQVWKHAEEIIAIKTTVTKLQAIVERRQKLDAEVEGSLKILLADIGSNNGSTATSDQKEEAFKQLFNKLVIIRDEEETGDAQLVDNTHEPYVNAAGS 415
            P    T   P+ G+ FADIII  M+++ +GPS E+G LL +I+NQGTS DE +G   +TP  +ASQHRL VWL FII RL V  P   GD   + +     VD R    L       D+++   V+K  + P +A F   HYR +   T+  EAL   +  L  ++P A ++P E P  +  WM+   +A+LA++A++G L + ++   + +A+I  RW  R   + AWRAFA A+R ++  A TL +   + +DP    +P L+   K SLK WT +++  V R+ +E+E AI      +  L  LM +ST E++ K + +N E+ + ++   +   I +++TTV  L+ +V+R  +LD +++ SL+IL       +G      + +EA  ++    +  R       A L  +     +N AG+
Sbjct:   14 PARTVTGSAPLDGRTFADIIIRFMTENREGPSLEQGELLEYIRNQGTSADEGDGMCNKTPIQFASQHRLIVWLMFIIRRLNVFRPEFLGDALRDMNA----VDPRLRRTLKGD----DLVKYDAVVKLLTVPATAVFLEGHYRGQTKETE--EALTAAFKALKYTAPEAREIPNEPPA-LAAWMMASTTAKLAIEAYTGGL-WGLFTSCLKLAEIVKRWSARDRERLAWRAFAEAHRGMIESARTLARANAMADDPGIALSPILSKSIKNSLKAWTGSVQDLVERLCKEVEAAIANPSTTRDELKMLMAKSTVEVLEKRALMNVELEKTRRDCDNTRRIYSLQTTVENLKPMVDRFLQLDEDLKESLQIL------KHGREVAQREIDEALDRVLKTYLFDRGHGNGTYAALAPDLAAAQLNIAGA 421          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig896.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHE0_9PHAE5.990e-4933.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig896contigA-nodosum_M_contig896:180837..203972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig896.17.1mRNA_A-nodosum_M_contig896.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig896 180790..204511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig896.17.1 ID=prot_A-nodosum_M_contig896.17.1|Name=mRNA_A-nodosum_M_contig896.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=432bp
MTPYEIGTDDTPISGQLFADIIISLMSKSPQGPSEEEGRLLIFIKNQGTS
PDEEGKLGRTPRVYASQHRLPVWLRFIIHRLEVDPPGDTSTERHRGSFDV
DRRHMAELPLGSSERDILRDVLKSNSDPQSARFNRKHYREKMDSTDKAEA
LRKGYDKLDSSPFAEDMPEEDPVKMGLWMVGKISAELAVQAFSGTLLFDV
YQVGMGIADIWMRWRGRKEAKGAWRAFAIAYRQVLTCAWTLDKLTEDPYA
PSLATDAKKSLKDWTEAIKGAVMRVREEIERAIEGHRVQQSHLLNLMYRS
TAELMVKHSEINKEISQLQQVWKHAEEIIAIKTTVTKLQAIVERRQKLDA
EVEGSLKILLADIGSNNGSTATSDQKEEAFKQLFNKLVIIRDEEETGDAQ
LVDNTHEPYVNAAGSSRASTAGGVEEAKGRG*
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