mRNA_A-nodosum_M_contig8914.3.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A0U1WNP6_SARFS (NADH dehydrogenase subunit 7 n=22 Tax=Fucales TaxID=3009 RepID=A0A0U1WNP6_SARFS) HSP 1 Score: 382 bits (982), Expect = 4.880e-131 Identity = 185/201 (92.04%), Postives = 195/201 (97.01%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
+KKL+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIE+KT+VQALPYFDRLDYVSMMCQEHTYVLAVE LLQVSIP+RAQ+IRVLFAEITRIL+HLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVS D+ LG++DDIY F GQFGQRLDEMEEMLTDNRIWQERLV
Sbjct: 8 FEKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIESKTFVQALPYFDRLDYVSMMCQEHTYVLAVEKLLQVSIPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSLDMGLGLLDDIYAFVGQFGQRLDEMEEMLTDNRIWQERLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: NDUS2_PYLLI (NADH-ubiquinone oxidoreductase 49 kDa subunit n=72 Tax=Phaeophyceae TaxID=2870 RepID=NDUS2_PYLLI) HSP 1 Score: 381 bits (979), Expect = 1.390e-130 Identity = 185/201 (92.04%), Postives = 193/201 (96.02%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
KKL+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY QALPYFDRLDYVSMMCQEHTY L+VENLLQVSIPRRAQ IRVLFAEITRIL+HLLAVGCHAMDVGAMTPFLW+FEEREKLMEFYERVSGARMHASYFRPGGVSQDIS+G+VDDI+ F QFGQRLDE+EEMLTDNRIWQERLV
Sbjct: 8 FNKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYFQALPYFDRLDYVSMMCQEHTYALSVENLLQVSIPRRAQFIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHASYFRPGGVSQDISVGLVDDIFAFVAQFGQRLDEIEEMLTDNRIWQERLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A4D6E538_9PHAE (NADH dehydrogenase subunit 7 n=2 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E538_9PHAE) HSP 1 Score: 380 bits (976), Expect = 3.980e-130 Identity = 181/201 (90.05%), Postives = 196/201 (97.51%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
KKL+HFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY QALPYFDRLDYVSMMCQEHTY LAVENLLQ+S+P+RAQ+IRVLFAEITRIL+HLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDI++G+++DI++F+ QFGQRLDE+EEMLTDNRIWQERLV
Sbjct: 8 FNKKLKHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYFQALPYFDRLDYVSMMCQEHTYSLAVENLLQISVPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDITIGLIEDIFSFSAQFGQRLDEVEEMLTDNRIWQERLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A8F0K0U0_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0K0U0_9PHAE) HSP 1 Score: 378 bits (970), Expect = 3.250e-129 Identity = 182/200 (91.00%), Postives = 191/200 (95.50%), Query Frame = 1
Query: 10 KKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
+K LQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY+QALPYFDRLDYVSMMCQEHT+ LAVE LLQ IP+RAQ+IRVLFAEITRIL+HLLAVGCHAMDVGAMTPFLW FEEREKLMEFYERVSGARMHASYFRPGGVSQDISLG+++DIY F QFGQRLDEMEEMLTDNRIWQERLV
Sbjct: 9 EKSLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYIQALPYFDRLDYVSMMCQEHTFALAVEKLLQSGIPKRAQYIRVLFAEITRILNHLLAVGCHAMDVGAMTPFLWGFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGLIEDIYAFGAQFGQRLDEMEEMLTDNRIWQERLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: Q2TU97_DICDH (NADH dehydrogenase subunit 7 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TU97_DICDH) HSP 1 Score: 370 bits (950), Expect = 3.540e-126 Identity = 179/200 (89.50%), Postives = 191/200 (95.50%), Query Frame = 1
Query: 10 KKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
KK LQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIE+KTY+QALPYFDRLDYVSMMCQEHTY LAVENLL VSIPRRAQ+IRV+FAEITRIL+HLLAVGCHAMDVGAMTPFLW+FEEREKLMEFYERVSGARMHASYFRPGGVSQD+SLGI++DIY+F QFG RLDE+EEMLT N IW+ RLV
Sbjct: 9 KKNLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIESKTYLQALPYFDRLDYVSMMCQEHTYALAVENLLNVSIPRRAQYIRVIFAEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHASYFRPGGVSQDLSLGILNDIYSFCNQFGHRLDEIEEMLTSNPIWKLRLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A4Y5T7J7_9PHAE (NADH dehydrogenase subunit 7 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T7J7_9PHAE) HSP 1 Score: 365 bits (936), Expect = 4.730e-124 Identity = 176/200 (88.00%), Postives = 191/200 (95.50%), Query Frame = 1
Query: 10 KKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
+K LQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTY+QALPYFDRLDYVSMMCQEHTY L VE LLQV+IP+RAQ+IRV+FAEITRIL+HLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQD+SLG+++DI++F QFGQRLDE+EEMLT N IW+ RLV
Sbjct: 9 QKSLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYLQALPYFDRLDYVSMMCQEHTYSLGVEKLLQVNIPKRAQYIRVIFAEITRILNHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDLSLGLLNDIHSFCDQFGQRLDEVEEMLTSNPIWKLRLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A7S6UA25_9STRA (Nad7 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA25_9STRA) HSP 1 Score: 352 bits (903), Expect = 4.820e-119 Identity = 170/202 (84.16%), Postives = 186/202 (92.08%), Query Frame = 1
Query: 4 NLKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
+ +++LQ+FTINFGPQHPAAHGVLRL+LELNGE VQRADPHIGLLHRGTEKLIEAKTY+QALPYFDRLDYVSMM QEHTY LAVE LL S+P RAQ+IRVLF EITRIL+HLLAVGCHAMDVGAMTPFLW FEEREKLMEFYERVSGARMHA+Y RPGG+SQDISLG++DDIY FA QF RLDEMEEMLT NRIW++RLV
Sbjct: 7 DFRRQLQNFTINFGPQHPAAHGVLRLVLELNGEEVQRADPHIGLLHRGTEKLIEAKTYLQALPYFDRLDYVSMMVQEHTYSLAVEALLGASVPERAQYIRVLFCEITRILNHLLAVGCHAMDVGAMTPFLWGFEEREKLMEFYERVSGARMHAAYIRPGGLSQDISLGLLDDIYLFANQFATRLDEMEEMLTANRIWKQRLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: D3IUK8_HETAK (NADH dehydrogenase subunit 7 n=5 Tax=Chattonellaceae TaxID=658124 RepID=D3IUK8_HETAK) HSP 1 Score: 348 bits (894), Expect = 1.080e-117 Identity = 168/201 (83.58%), Postives = 184/201 (91.54%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
L +K+++FTINFGPQHPAAHGVLRL+LELNGEVV RADPHIGLLHRGTEKLIE KTY+QALPYFDRLDYVSMM QEHTYVL +E LL IP RAQ+IRVLF EITRIL+HLLAVGCHAMDVGAMTPFLW+FEEREKLMEFYERVSGARMHA+YFRPGGVSQD+ LGI+DDIY F+ QF RLDEMEEMLT NRIW++RLV
Sbjct: 7 LSRKIKNFTINFGPQHPAAHGVLRLVLELNGEVVDRADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMTQEHTYVLGIEKLLGCDIPVRAQYIRVLFCEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYFRPGGVSQDLPLGILDDIYLFSKQFVTRLDEMEEMLTSNRIWKQRLV 207
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A140F2Z4_9STRA (NADH dehydrogenase subunit 7 n=9 Tax=Monodopsidaceae TaxID=425072 RepID=A0A140F2Z4_9STRA) HSP 1 Score: 348 bits (893), Expect = 1.590e-117 Identity = 168/201 (83.58%), Postives = 183/201 (91.04%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERLV 609
L KK+++FTINFGPQHPAAHGVLRL+LELNGE+V+RADPHIGLLHRGTEKLIE KTY+QALPYFDRLDYVSMM QEHTY LAVE L IP RAQ+IRVLF EITRIL+HLLAVGCHAMDVGAMTPFLW+FEEREKLMEFYERVSGARMHA+Y RPGGVSQDI LG++DDIY F QFG RLDEMEEMLT NRIW++RLV
Sbjct: 8 LSKKIKNFTINFGPQHPAAHGVLRLVLELNGEIVERADPHIGLLHRGTEKLIEYKTYIQALPYFDRLDYVSMMAQEHTYSLAVEKLANTKIPVRAQYIRVLFLEITRILNHLLAVGCHAMDVGAMTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVSQDIPLGLLDDIYIFVEQFGIRLDEMEEMLTANRIWKQRLV 208
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Match: A0A8E8PDP1_9PHAE (Nad7 n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PDP1_9PHAE) HSP 1 Score: 343 bits (880), Expect = 1.540e-115 Identity = 160/200 (80.00%), Postives = 187/200 (93.50%), Query Frame = 1
Query: 7 LKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTEKLIEAKTYVQALPYFDRLDYVSMMCQEHTYVLAVENLLQVSIPRRAQHIRVLFAEITRILSHLLAVGCHAMDVGAMTPFLWSFEEREKLMEFYERVSGARMHASYFRPGGVSQDISLGIVDDIYTFAGQFGQRLDEMEEMLTDNRIWQERL 606
+KK+++FTINFGPQHPAAHGVLRL+LEL GEVVQRADPHIGLLHRGTEKLIE KTY+QALPYFDRLDYVSMMCQEHT+VLA+E LL+V +P R Q+IRVLFAE+TRIL+HLLAVGCHAMDVGAM+PFLW+FEEREKLMEFYER+SGARMH+SY RPGGVS+D+S+G+++DIY F+ QF QR+DEMEEML+ NRIW+ RL
Sbjct: 8 FEKKIKNFTINFGPQHPAAHGVLRLVLELQGEVVQRADPHIGLLHRGTEKLIETKTYMQALPYFDRLDYVSMMCQEHTFVLAIEKLLKVEVPVRGQYIRVLFAELTRILNHLLAVGCHAMDVGAMSPFLWAFEEREKLMEFYERLSGARMHSSYIRPGGVSRDVSIGLLNDIYHFSCQFSQRIDEMEEMLSGNRIWKGRL 207 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8914.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig8914.3.1 >prot_A-nodosum_M_contig8914.3.1 ID=prot_A-nodosum_M_contig8914.3.1|Name=mRNA_A-nodosum_M_contig8914.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=203bp MNLKKKLQHFTINFGPQHPAAHGVLRLILELNGEVVQRADPHIGLLHRGTback to top mRNA from alignment at A-nodosum_M_contig8914:15771..16379+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig8914.3.1 ID=mRNA_A-nodosum_M_contig8914.3.1|Name=mRNA_A-nodosum_M_contig8914.3.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=609bp|location=Sequence derived from alignment at A-nodosum_M_contig8914:15771..16379+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig8914:15771..16379+ >mRNA_A-nodosum_M_contig8914.3.1 ID=mRNA_A-nodosum_M_contig8914.3.1|Name=mRNA_A-nodosum_M_contig8914.3.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=609bp|location=Sequence derived from alignment at A-nodosum_M_contig8914:15771..16379+ (Ascophyllum nodosum dioecious)back to top |