prot_A-nodosum_M_contig8899.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8899.2.1
Unique Nameprot_A-nodosum_M_contig8899.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length139
Homology
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BLAST of mRNA_A-nodosum_M_contig8899.2.1 vs. uniprot
Match: D7G0R4_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0R4_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 3.050e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    3 CGKRPSFGVAGTKTAEYCRQHALDGMVNVHGK 34
            CGK P++GV GT   EYCR+HAL GMV+VH K
Sbjct:   50 CGKYPTYGVEGTSNREYCREHALSGMVDVHRK 81
[Close]
BLAST of mRNA_A-nodosum_M_contig8899.2.1 vs. uniprot
Match: A0A6H5J7Z7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z7_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 3.820e-5
Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 0 
Query:    3 CGKRPSFGVAGTKTAEYCRQHALDGMVNVHGK 34
            CGK P++GV GT   EYCR+HAL GMV+VH K
Sbjct:   50 CGKYPTYGVEGTSNREYCREHALSGMVDVHRK 81
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8899.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G0R4_ECTSI3.050e-565.63EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5J7Z7_9PHAE3.820e-565.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 2..31
e-value: 1.7E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8899contigA-nodosum_M_contig8899:14036..14452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8899.2.1mRNA_A-nodosum_M_contig8899.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8899 14036..14452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8899.2.1 ID=prot_A-nodosum_M_contig8899.2.1|Name=mRNA_A-nodosum_M_contig8899.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=139bp
KGCGKRPSFGVAGTKTAEYCRQHALDGMVNVHGKVRIEDSGMISAFKVAD
TKTDEHCAQHNRLRSGIKGCRRRWIDPNFSGKKSNGAACPSGSKQKTVHL
SSTQESPFSGSSRGSCKRVRYLHNGPTAMKRAVALESAT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys