prot_A-nodosum_M_contig886.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig886.14.1
Unique Nameprot_A-nodosum_M_contig886.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1004
Homology
BLAST of mRNA_A-nodosum_M_contig886.14.1 vs. uniprot
Match: D7FSW4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW4_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.890e-65
Identity = 285/893 (31.91%), Postives = 374/893 (41.88%), Query Frame = 0
Query:  205 MDMPGSVVKIVEDRDRAVRLCLQYQRKLRNAEGSLRDAEHRISNLAQQAGEATAAEEATHKLLDQAMEKARENECRELKLETKIGHDDSACSSTFNDAQGPMMLLARARRDLRELWLERNELATLAGQAMQAESDGLERVKKLELVIQGLREQAMSMASAECGMAEKMAKVEARAAIAEKARQDLNSAVCGIKSDFKVLVRDLRQRDQRVRRLEAEKAALASKSAGVRATCNDAPRRAQQKQSRLRATSRSSARIPAVITQARGT--QVNGLCPTCSARINGDVSGEPTRQTSPRIRDPAAGRHRPERVHESSDRLDF-----RKDERVGDCDLKIAAGAGASDGLECTPALRLMWKQLTPVASFAPGRVSAMSYPRYGSRVMLDGPVEGSTHAKGGDPTV------RSTVELSG----------------------VSDSTASGTVEQPGAGVKDGTLP------------GPPEESEAL--ERVLILPMLALRPSPSPCESTERTGALTQASYMRGPCGERIDHSQRDK---ADSGEKVDEDRSAEVASPS---RMQGQGQCSEGVDESSQQQPETDLGVEVVGDGRPCLVGDNREENDSVPRFEGSLEDSAHYLCHSSSSEAMKRSGSEASRRTTAGVEGETVRDEETTLAPRPEQEYISGATVPRLVGGIRVLKYGGSGRGKTKAKTLWVTPDLSEIYYTAIGRSSNSKQTSRMPLAELRAE----------RSSRGDRCFSFVRARSHAEDSADEHSSRTETIYADRLGRHGGIDT----------ARRRWGFGIALPLTVTRGKRSWREGDG----VVGP--------------------------ASQRSFPAGGRVDERMSFEAASTEERDALVDEVNRLVRRAG 992
            M  P  +++++EDRDRA+ LCLQY+ KLRN EGSLR  E   S L  Q  EA AA EAT KL DQ M+K R +E R+++       DD + +    DA+   + L RAR+DLRELWLER+ELA LAGQA+Q E  G +R+KKLELV+  LREQ  ++A +E   AE+ A+                 AV GIK+DF+ LV +LR R++++R++EA+ A LA KS     T    PR              + +R PA    A G   +V+      +    G V  +  R++     DP+  R + E    ++  L       ++ E  G    K    + A         +    KQL P  S  PGRV AMSYPR  +RV     +  +TH       V      R TV   G                            S   E  G    DG  P            G PE S     +   + P     PSP  C     T + T A     P    +  S   +   AD G    ED    + S     R+    +  EG D +S +        ++   GR     D   E  S P   G +E++     H          G EA+       EG    D              + A  PRLV G+ VLKYGG  RGK KAK LWVTPDLSEI+YT  GR+ NSK++S MPLA L A           RS+  DRCF+ V+A          H  +                            RR+WG G  LP  +  G+R WR G G      GP                          A+ +  PAG    ERM  E  + EE  ALVDE+N LVRRAG
Sbjct:    1 MGTPKKLLELIEDRDRALHLCLQYRCKLRNTEGSLRAEERLASELKGQLREANAAGEATRKLFDQVMDKVRADEGRKIRQAASSREDDKSNARYAEDARKGRLQLTRARKDLRELWLERDELAKLAGQAIQGEQAGSKRIKKLELVVSSLREQVAALALSEHRAAEEAARAXXXXXXXXXXXXXXXXAVEGIKTDFEALVHELRIREKQIRQMEAKNATLAVKSLPTSPT----PR------------GHTRSRSPAETGNAEGDNQRVSPRTRRMTPESKGCVRVKELRKSRNSRVDPSPARAK-EATSLNTQALAHPQKRGKRGEEAGIPPGKNGRRSNAPPAAAVPSVVYPARKQLAPRKSEIPGRVMAMSYPRGVNRVTF---MPSNTHVTTPPARVPASVPARETVRPVGPILEEGNCCMEXXXXXXXXXXXXXXEVCSAPTEVAGTVTDDGRRPEAQLDQSGEEKSGAPETSPPSPGQDCAVPPQ---SPSPRHCRQPACTFSETAAPPASDP-RPTVGMSNTTEVALADLGGAAPEDGVVGLGSAGGTERLTTDAETREGADNASAEGVPPPPLAQIASTGRFSGDDDEPGEEKSTPHG-GKIEEAKSEAGH----------GIEATPEQPGLEEGRRDPD--------------AAAFRPRLVEGVPVLKYGG--RGKPKAKMLWVTPDLSEIFYTQAGRTKNSKKSSHMPLAGLCASKGRGDHPEPARSTTDDRCFALVQAADSLGHDNPHHKDKDXXXXXXXXXXXXXXXXXXXXXXXPAPGRRKWGIGGTLPANLVHGRR-WRGGPGSAATTTGPTERLGASATSAXXXXXXXXXXXXXXXAAPQQHPAGA-TRERMVLETTNAEECTALVDEINELVRRAG 840          
BLAST of mRNA_A-nodosum_M_contig886.14.1 vs. uniprot
Match: A0A6H5LEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEL5_9PHAE)

HSP 1 Score: 153 bits (387), Expect = 1.950e-34
Identity = 254/896 (28.35%), Postives = 354/896 (39.51%), Query Frame = 0
Query:  205 MDMPGSVVKIVEDRDRAVRLCLQ------YQRKLRNAEGSLRDAEHRISNLAQQAGEATAAEEATHKLLDQAMEKARENECRELKLETKIGHDDSACSSTFNDAQGPMMLLARARRDLRELWLERNELATLAGQAMQ-AESDGLERVKKLELVIQGLREQAMSMASAECGMAEKMAKVEARAAIAEKARQDLNSAVCGIKSDFKVLVRDLRQRDQRVRRLEAEKAALASKSAGVRATCNDAPRRAQQKQSRLRA------TSRSSARIPAVITQARGT-QVNGLCPTCSARINGDVSGEPTRQTSPRIRDPAAGRHRPERVHESSDRLDFRKDERVGDCDLKIAAGAGASDGLECTPALRLMWKQLTPVASFAPGRVSAMSYPRYGSRVMLDGPVEGSTHAKGGDPTV------RSTVELSGVSDSTAS--------------------GTVEQPGAGVKDGTLP------GPPEESEALERVLILPMLALR-PSPSPCESTERTGALTQASYMRGPCGER---IDHSQRDK---ADSGEKVDEDRSAEVASPSRMQ---GQGQCSEGVDESSQQQPETDLGVEVVGDGRPCLVGDNREENDSVPRFEGSLEDSAHYLCHSSSSEAMKRSGSEASRRTTAGVEGETVRDEETTLAPRPEQEYISGATVPRLVGGIRVLKYGGSGRGKTKAKTLWVTPDLSEIYYTAIGRSSNSKQTSRMPLAELRAE----------RSSRGDRCFSFVRARSHAEDSADEHSSRT----------ETIYADRLGRHGGIDTARRRWGFGIALPLTVTRGKRSWREGDG----VVGPASQRSFPA----------------------------GGRVDERMSFEAASTEERDALVDEVNRLVRRAG 992
            MD P  +++++EDRDRA+ LCLQ      ++R       SLR               A ++ E    L+D             L   T+     +       + +G +    R   +L+    E N     AG+A +  E  G +R+KKLELV+  LREQ  ++A +E   AE+  + EARA     A +DL +AV GIK+DF+ LV +LR R++++R++EA+ A LA +S     T    PR   + +S            R S R   +  +++G+ +V  L  + ++ ++   S      TS   R  A  + R +R  E+   +   K+ R G+     A  +         PA     KQL P  S  PGRV AMSYPR  +RV        +TH      TV      R TV   G     AS                       E  G    DG  P         E+S A +R    P      P  SP     R  A T +     P  +    +  S+  +   AD G    ED    + S    +      +  EG + +S +     +  +    GR     D   E  S P   G +ED+     H                    GVE  +   E+  L  +  ++  + A  PRLV G+ VLKYGG  RGK KAK LWVTPDLSEI+YT  GR+ NSK++S MPLA L A           RS+  DRCF+ V+A          H  +                            RRRWG G  LP  +  G+R WR G G      GP  +    A                             G   ERM  E  + EE  ALVDE+N LVRRAG
Sbjct:    1 MDTPKKLLELIEDRDRALHLCLQSSTIAPWERHGTRLHISLR---------------AVSSTETAFSLVDV------------LTSSTRFADLLTQYRCKLRNTEGSLRAEERLASELKGQLREANA----AGEATRKGEQSGSKRIKKLELVVSSLREQVAALALSEHRAAEQAGRAEARAXXXXXAERDLRAAVEGIKTDFEALVHELRLREKQIRQMEAKNATLAVRSVPTSPT----PRGHTRSRSPAETGNAEGDNQRVSPRTRGMTPESKGSVRVKELHKSRNSSVDSS-SARAKEATSLNTRALARPQKRGKRGEEAC--IPPGKNGRRGNSPHAAAVPSVVY------PAR----KQLAPRKSEIPGRVMAMSYPRGVNRVTF---TPSNTHVTTPPATVXXXXXARETVRPVGPIPEEASCXXXXXXXXXXXXXGGEVCSAPAEVAGTVTDDGRRPEAQLDRSGEEKSGASQRSPPSPSQDCAVPPQSPFPRHCRQPACTCSETAAPPASDHHPIVGMSKTTEVILADLGGAAPEDGVVGLGSAGGTELLTTDTETREGAENASAEGVSPPV-AQTASTGRFSGDDDEPGEEKSTPHG-GKIEDAKSEAGH--------------------GVEASS---EQPGLG-KGRRDPDAAAFRPRLVEGVPVLKYGG--RGKPKAKMLWVTPDLSEIFYTQAGRTKNSKKSSHMPLAGLCASKGRGDHPEPARSTTDDRCFALVQAADSLGHDNPHHKVKEGGGXXXXXXXXXXXXXXXXXXXXXXPGRRRWGIGGTLPANLVHGRR-WRGGSGSAATTTGPTERLGASATSASGSXXXXXXXXXXXXXXGAVLQHHPAGATRERMVLETTNAEECTALVDEINELVRRAG 816          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig886.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSW4_ECTSI1.890e-6531.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LEL5_9PHAE1.950e-3428.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..259
NoneNo IPR availableCOILSCoilCoilcoord: 372..392
NoneNo IPR availableCOILSCoilCoilcoord: 407..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 764..787
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 741..757
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..617
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 586..637
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..514
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 653..803
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 677..701
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..514

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig886contigA-nodosum_M_contig886:168613..174096 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig886.14.1mRNA_A-nodosum_M_contig886.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig886 168401..174574 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig886.14.1 ID=prot_A-nodosum_M_contig886.14.1|Name=mRNA_A-nodosum_M_contig886.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1004bp
MFYLRTCTSARSGNPRHSRITSMTTPKKFLCVAGRSTRGDCFATQVGVLS
SLPRPASAPQRFRHTGIPTRLDSVLVSGRQRSVSACTASSLVRFPLPAKN
IRKARSLSPRPGVPCRFRQGIATGQRNGHSLDANGITVGWFAGISPTAWK
TRETKDIESSETTRSECCLSRDQSGASSAGSAVVVLGDRKVILSQQEALT
GGMGMDMPGSVVKIVEDRDRAVRLCLQYQRKLRNAEGSLRDAEHRISNLA
QQAGEATAAEEATHKLLDQAMEKARENECRELKLETKIGHDDSACSSTFN
DAQGPMMLLARARRDLRELWLERNELATLAGQAMQAESDGLERVKKLELV
IQGLREQAMSMASAECGMAEKMAKVEARAAIAEKARQDLNSAVCGIKSDF
KVLVRDLRQRDQRVRRLEAEKAALASKSAGVRATCNDAPRRAQQKQSRLR
ATSRSSARIPAVITQARGTQVNGLCPTCSARINGDVSGEPTRQTSPRIRD
PAAGRHRPERVHESSDRLDFRKDERVGDCDLKIAAGAGASDGLECTPALR
LMWKQLTPVASFAPGRVSAMSYPRYGSRVMLDGPVEGSTHAKGGDPTVRS
TVELSGVSDSTASGTVEQPGAGVKDGTLPGPPEESEALERVLILPMLALR
PSPSPCESTERTGALTQASYMRGPCGERIDHSQRDKADSGEKVDEDRSAE
VASPSRMQGQGQCSEGVDESSQQQPETDLGVEVVGDGRPCLVGDNREEND
SVPRFEGSLEDSAHYLCHSSSSEAMKRSGSEASRRTTAGVEGETVRDEET
TLAPRPEQEYISGATVPRLVGGIRVLKYGGSGRGKTKAKTLWVTPDLSEI
YYTAIGRSSNSKQTSRMPLAELRAERSSRGDRCFSFVRARSHAEDSADEH
SSRTETIYADRLGRHGGIDTARRRWGFGIALPLTVTRGKRSWREGDGVVG
PASQRSFPAGGRVDERMSFEAASTEERDALVDEVNRLVRRAGSGKETQTL
KVT*
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