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Homology
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: D7FXX4_ECTSI (Derlin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXX4_ECTSI) HSP 1 Score: 409 bits (1052), Expect = 2.630e-138 Identity = 188/246 (76.42%), Postives = 219/246 (89.02%), Query Frame = 3
Query: 150 MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVDGGGHLHVD 887
MNNAPADPLSWYYDIP+VTRVYLT AF+TTA+CQ+DA S+ KLF+SWPLIC+GQ+WRLVTNFF+FG++D++FLFHMYFLVRYSRLLEEG+FRGRTGDF+WFLLFCAS+M +AP++ ++FLGRPLAFMMVYVWGRRNEHVRMN+LGMFPFTAPYL WVLL + V+ SPL +DLLGIAVGH++YFLEFVYPEVA IRGWK KQLMRAP+ +QQLCGQ+PA +DVP V P PD G GHLH D
Sbjct: 1 MNNAPADPLSWYYDIPVVTRVYLTAAFVTTAMCQLDATSSTKLFFSWPLICKGQVWRLVTNFFFFGALDVHFLFHMYFLVRYSRLLEEGDFRGRTGDFVWFLLFCASLMIGAAPYLAMNFLGRPLAFMMVYVWGRRNEHVRMNLLGMFPFTAPYLPWVLLLLSAVLGSPLKSDLLGIAVGHLFYFLEFVYPEVANIRGWKWKQLMRAPRIVQQLCGQVPAVDRQDVPAVVPVPDVGQ---GHLHDD 243
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7S2Y1F4_9STRA (Derlin n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F4_9STRA) HSP 1 Score: 291 bits (746), Expect = 5.740e-92 Identity = 146/255 (57.25%), Postives = 185/255 (72.55%), Query Frame = 3
Query: 165 ADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVM-HSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFP---------APDNG---VDGG--GHLH 881
ADP SWY +IPIV+R+YLT +F+TTA C +D +S L+++ LI +GQ+WR++TNFF+FG L FLFHMYFLVRY RLLEEGEFRGRT DF+WFLL ++MT++APFV + FLG L FMMVYVWGR N+HVRM+ LG+FPFTAPYL WVLL F+V++ HSP D++GI VGH+YYF EFV+PEVA+IR W+VK+++ AP + +LCG V F AP+NG DGG GHLH
Sbjct: 4 ADPWSWYTEIPIVSRIYLTASFLTTAACALDIVSPYSLYFNVTLIFGKGQIWRILTNFFFFGLFSLDFLFHMYFLVRYCRLLEEGEFRGRTADFVWFLLVGGTLMTMAAPFVSVLFLGSSLTFMMVYVWGRLNQHVRMSFLGLFPFTAPYLPWVLLLFSVLLGHSP-AVDVIGIVVGHLYYFFEFVFPEVARIRRWRVKRVLAAPSFLHRLCGTYTDHNQPQVLNDFAEAQAQQNEDAPNNGFNVADGGQNGHLH 257
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: T0PTH3_SAPDV (Derlin n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PTH3_SAPDV) HSP 1 Score: 285 bits (730), Expect = 8.050e-90 Identity = 135/240 (56.25%), Postives = 174/240 (72.50%), Query Frame = 3
Query: 168 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVF-PAPDNGVDGGGHLH 881
DPL WYY+IP+++R+YLTGAF+TTA C ++ IS L++++ LI RGQ+WRL+TNF +FG L FLFHMYFLVRYSR+LEEG FRGRT DFL+ +LF A+ M L APFV + FLG L FMMVY+WGRRNEH R++ LG+FPFTAPYL WVLL F++V+ + DL+GI VGH+YYF E VYP +A IRGW+V+++++ P ++ LC P P V P V GHLH
Sbjct: 3 DPLEWYYEIPVISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMILFGAAFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPTIADIRGWRVRRVLKTPAFVKFLCN--PHAFTMGQPNVINDVPVENVGADGHLH 240
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7R9UC87_9STRA (Derlin n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UC87_9STRA) HSP 1 Score: 278 bits (711), Expect = 5.410e-87 Identity = 132/213 (61.97%), Postives = 161/213 (75.59%), Query Frame = 3
Query: 159 APADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVM-HSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLC 794
APA P SWY +IP V+R+YLT + + T C +D IS L+Y+W LI GQLWRL TNF +FG+ L FLFHMYFLVRYSRLLEE EFRGRT DF + LLF AS+M APFV I FLG L+FMMVYVW RRNEHVRM+ G+ PF APYL WVLLGF+ ++ HSP DL+GIAVGH+YYFLEFV+P VA IRGW+ +++++ P +Q +C
Sbjct: 25 APASPWSWYAEIPPVSRLYLTLSVLVTLACAVDLISPFALYYNWSLISEGQLWRLFTNFLFFGTFGLDFLFHMYFLVRYSRLLEENEFRGRTADFAFMLLFGASLMLCVAPFVHIHFLGSSLSFMMVYVWARRNEHVRMSFFGVVPFNAPYLPWVLLGFSTLLGHSP-TIDLIGIAVGHIYYFLEFVFPAVASIRGWQTRKVLQTPAVLQYVC 236
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A485LAJ1_9STRA (Derlin n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LAJ1_9STRA) HSP 1 Score: 279 bits (714), Expect = 7.540e-87 Identity = 131/230 (56.96%), Postives = 166/230 (72.17%), Query Frame = 3
Query: 168 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDN 854
DPL WYY+IPI++R+YLTGAF+TTA C ++ IS L++++ LI RGQ+WRL+TNF +FG L FLFHMYFLVRYSR+LEEG FRGRT DFL+ LL A M L APFV + FLG L FMMVY+WGRRNEH R++ LG+FPFTAPYL WVLL F++V+ + DL+GI VGH+YYF E VYP +A IRGW+V++++ P ++ LC V P DN
Sbjct: 36 DPLEWYYEIPIISRLYLTGAFLTTAACALELISPFSLYFNFNLIFYRGQVWRLLTNFLFFGLFSLDFLFHMYFLVRYSRMLEEGSFRGRTADFLYMLLLGAFFMILVAPFVSVHFLGSSLTFMMVYIWGRRNEHTRLSFLGLFPFTAPYLPWVLLLFSMVLGNSATIDLIGIVVGHIYYFFEDVYPAIADIRGWRVRRVLETPTFVKFLCNPQAFTNQPPVVNDIPVVDN 265
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: F0VYR4_9STRA (Derlin n=3 Tax=Albugo TaxID=65356 RepID=F0VYR4_9STRA) HSP 1 Score: 280 bits (715), Expect = 8.460e-87 Identity = 136/247 (55.06%), Postives = 174/247 (70.45%), Query Frame = 3
Query: 147 KMNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVD-GGGHLH 881
KMN DPL WYYDIPI++R+YLTG F+TTA C +D IS L+Y++ LI +GQ+WRLV+NF +FG L FLFHMYF+VRY RLLEEG FR R D+++ LLF A++M L APFV + FLG L FMMVY+WGRRN VRM+ LG+FPFTAPYL WVLL F++ + + DL+GI VGH YYFLE +YP +A IRGWK+K+ + P+ ++ LC P+ V + A N + GG HLH
Sbjct: 58 KMN----DPLEWYYDIPIISRLYLTGCFLTTASCALDLISPFSLYYNFNLIFYKGQVWRLVSNFLFFGLFSLDFLFHMYFVVRYCRLLEEGSFRNRPADYVYMLLFGAALMILVAPFVSVHFLGSSLTFMMVYIWGRRNSDVRMSFLGLFPFTAPYLPWVLLSFSIALGNSATTDLIGIFVGHTYYFLEDIYPSIAAIRGWKIKRPLTTPRILKYLCD------PQAVTPQYNAVPNVIGLGGNHLH 294
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A835Z6W2_9STRA (Derlin n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6W2_9STRA) HSP 1 Score: 277 bits (709), Expect = 2.480e-86 Identity = 134/249 (53.82%), Postives = 178/249 (71.49%), Query Frame = 3
Query: 150 MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSP--LNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQ---IPADRPRDVP---GVFPAPDNGVDGGG 872
M+ DPL WYY+IP V+R Y+T AF+TTAL +D +S + F +W L+ +GQ WRL+T F +FG++ L FLFHMYFL RY RLLEEGEF +T DF++FLLF A +M + P V + FLG L+FMMVYVWGRRNEHVRM++ G+ PFTAPYL WVLL +V++++ L+ DLLGI VGH+YYFL F+YPEVA IRGW++++++ P+ +Q LCG+ A++PR V G P P G GG
Sbjct: 1 MDGNAGDPLQWYYEIPPVSRTYMTAAFVTTALTALDLVSPIQFFLNWKLVMQGQAWRLLTTFLFFGTLSLDFLFHMYFLARYCRLLEEGEFHRKTSDFVFFLLFGAVLMLAAQPLVSLPFLGSSLSFMMVYVWGRRNEHVRMSLFGLLPFTAPYLPWVLLAVSVLVNNSGALSTDLLGIGVGHMYYFLAFIYPEVAAIRGWRLRRVIHTPRLLQVLCGERALAHAEQPRIVEPAGGALP-PQGGNRLGG 248
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A7S2EGE3_TRICV (Derlin n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S2EGE3_TRICV) HSP 1 Score: 275 bits (702), Expect = 8.570e-86 Identity = 124/211 (58.77%), Postives = 163/211 (77.25%), Query Frame = 3
Query: 168 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLI-CRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCG 797
D +SWY DIP+V+R+Y TGAF+TTA C +D IS L+++W LI +GQ+WRL T + +FG + FLFHMYFLVRY RLLEEG+FRGRT +F+ LLF ++MTL APFV + FLG L FMM YVWGRRNE VRM+ LG+F F APYL WV+LGF+V++ +P+ D++GI VGH YYFLE+VYP +A+IRGWKV+++M P+ + +CG
Sbjct: 16 DFMSWYMDIPVVSRLYFTGAFLTTAGCALDIISPFSLYFNWDLIFSQGQIWRLFTTYLFFGMFSIDFLFHMYFLVRYCRLLEEGDFRGRTANFVLLLLFGITMMTLVAPFVSVHFLGSSLTFMMTYVWGRRNEDVRMSFLGVFSFKAPYLPWVMLGFSVLLGNPVTIDVVGILVGHTYYFLEYVYPVIAEIRGWKVRRIMEPPRLLHWICG 226
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A0P0YV63_9STRA (Derlin n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YV63_9STRA) HSP 1 Score: 273 bits (698), Expect = 4.150e-85 Identity = 117/219 (53.42%), Postives = 164/219 (74.89%), Query Frame = 3
Query: 159 APADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLICRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADR 815
A D LSWY IP+++R+YLTGA +TTA C ++ + L++SW L+ +GQ+WRL+T++ +FG+ + F+FHMYFL+RYSR LEEGEFRG+T +LW L+F ++ A + I FLG L FMM+YVWGRRNE V+M+ G F APYL WV+LGF+V+M +P++ DL+GI VGHVYYFL+FVYP VA IRGWK++++M P +Q +CG +PA++
Sbjct: 16 AEVDVLSWYMGIPVISRLYLTGALLTTAACAVEFTTPYSLYFSWDLVFKGQVWRLITSYLFFGAFSIDFMFHMYFLIRYSRFLEEGEFRGQTAKYLWMLMFGICCISGIAVYTNIPFLGNALTFMMLYVWGRRNESVKMSFFGFLQFNAPYLPWVMLGFSVLMGNPISTDLIGIVVGHVYYFLDFVYPVVADIRGWKMRKIMEPPTVLQWMCGDMPANQ 234
BLAST of mRNA_A-nodosum_M_contig864.23.1 vs. uniprot
Match: A0A225VPV8_9STRA (Derlin n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A225VPV8_9STRA) HSP 1 Score: 271 bits (694), Expect = 1.640e-84 Identity = 129/241 (53.53%), Postives = 167/241 (69.29%), Query Frame = 3
Query: 168 DPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLIC-RGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLWFLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPFTAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWKVKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVDGGGHLHVD 887
DPL WYY+IP+V+R+YLTG+F+TT C +D +S L++++ LI +GQ+WRL TNF +FG L FLFHMYF+VRY RLLEEG FRGRT DF++ LL A M + APFV I FLG L FMMVY+WGRRNEHVRM+ LG+FPFTAPYL WVL F++++ + DL+GI VGH+YYFLE VYP +A IRGWK ++ + P+ I+ + PA +V F D H H +
Sbjct: 3 DPLEWYYEIPVVSRLYLTGSFLTTTACALDLVSPFSLYFNFNLIFFKGQVWRLATNFMFFGLFSLDFLFHMYFVVRYCRLLEEGSFRGRTADFVYMLLLGAVFMIVLAPFVNIHFLGSSLTFMMVYLWGRRNEHVRMSFLGLFPFTAPYLPWVLFSFSILLGNSATTDLIGIIVGHIYYFLEDVYPTIASIRGWKTQRPLETPRIIRYMFDPRPAVADGEVINDF------ADVNDHPHAE 237
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FXX4 |
| Preferred name | DERL2 |
| PFAMs | DER1 |
| Model size | 1686 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC00003,RC02120,RC03389,RC03391 |
| KEGG ko | ko:K13989,ko:K19737 |
| KEGG Reaction | R11216,R11218,R11220 |
| KEGG Pathway | ko04141,map04141 |
| KEGG Module | M00403 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0001558,GO:0001967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006508,GO:0006511,GO:0006517,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006952,GO:0006986,GO:0007154,GO:0007165,GO:0007610,GO:0007631,GO:0008104,GO:0008150,GO:0008152,GO:0008284,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009607,GO:0009617,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010605,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0018193,GO:0018196,GO:0018279,GO:0019222,GO:0019538,GO:0019941,GO:0023052,GO:0030162,GO:0030163,GO:0030176,GO:0030307,GO:0030433,GO:0030968,GO:0030970,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032269,GO:0032386,GO:0032387,GO:0032527,GO:0032879,GO:0032880,GO:0033036,GO:0033157,GO:0033554,GO:0034613,GO:0034620,GO:0034645,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0036507,GO:0036508,GO:0040008,GO:0042127,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042742,GO:0042886,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045861,GO:0045927,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051051,GO:0051128,GO:0051171,GO:0051172,GO:0051179,GO:0051223,GO:0051224,GO:0051234,GO:0051246,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051705,GO:0051707,GO:0051716,GO:0060255,GO:0060341,GO:0061136,GO:0065007,GO:0070085,GO:0070201,GO:0070727,GO:0070861,GO:0070862,GO:0070887,GO:0071310,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0097708,GO:0098542,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901698,GO:1901799,GO:1903050,GO:1903051,GO:1903362,GO:1903363,GO:1903513,GO:1903573,GO:1903827,GO:1903828,GO:1904152,GO:1904153,GO:1904292,GO:1904293,GO:1904380,GO:1904950,GO:1905897 |
| Exons | 6 |
| Evalue | 4.78e-144 |
| EggNOG OGs | COG5291@1|root,KOG0858@2759|Eukaryota |
| Ec32 ortholog description | Derlin |
| Ec32 ortholog | Ec-16_005190.1 |
| EC | 2.1.1.320 |
| Description | ubiquitin-dependent ERAD pathway |
| Cds size | 741 |
| COG category | I |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03036 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870253.2218335-UTR-A-nodosum_M_contig864:279583..280379 | 1680870253.2218335-UTR-A-nodosum_M_contig864:279583..280379 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig864 279584..280379 - |
| 1680870253.3832865-UTR-A-nodosum_M_contig864:299335..299484 | 1680870253.3832865-UTR-A-nodosum_M_contig864:299335..299484 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig864 299336..299484 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680870253.2356272-CDS-A-nodosum_M_contig864:280379..280511 | 1680870253.2356272-CDS-A-nodosum_M_contig864:280379..280511 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 280380..280511 - |
| 1680870253.2470262-CDS-A-nodosum_M_contig864:281273..281360 | 1680870253.2470262-CDS-A-nodosum_M_contig864:281273..281360 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 281274..281360 - |
| 1680870253.3261106-CDS-A-nodosum_M_contig864:282083..282201 | 1680870253.3261106-CDS-A-nodosum_M_contig864:282083..282201 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 282084..282201 - |
| 1680870253.3415442-CDS-A-nodosum_M_contig864:282596..282763 | 1680870253.3415442-CDS-A-nodosum_M_contig864:282596..282763 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 282597..282763 - |
| 1680870253.3591225-CDS-A-nodosum_M_contig864:283509..283656 | 1680870253.3591225-CDS-A-nodosum_M_contig864:283509..283656 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 283510..283656 - |
| 1680870253.3723474-CDS-A-nodosum_M_contig864:299245..299335 | 1680870253.3723474-CDS-A-nodosum_M_contig864:299245..299335 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig864 299246..299335 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig864.23.1 >prot_A-nodosum_M_contig864.23.1 ID=prot_A-nodosum_M_contig864.23.1|Name=mRNA_A-nodosum_M_contig864.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=247bp
MNNAPADPLSWYYDIPIVTRVYLTGAFMTTALCQIDAISAAKLFYSWPLI CRGQLWRLVTNFFYFGSMDLYFLFHMYFLVRYSRLLEEGEFRGRTGDFLW FLLFCASIMTLSAPFVEISFLGRPLAFMMVYVWGRRNEHVRMNMLGMFPF TAPYLAWVLLGFNVVMHSPLNADLLGIAVGHVYYFLEFVYPEVAQIRGWK VKQLMRAPKAIQQLCGQIPADRPRDVPGVFPAPDNGVDGGGHLHVD* back to topmRNA from alignment at A-nodosum_M_contig864:279584..299484- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig864.23.1 ID=mRNA_A-nodosum_M_contig864.23.1|Name=mRNA_A-nodosum_M_contig864.23.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=19901bp|location=Sequence derived from alignment at A-nodosum_M_contig864:279584..299484- (Ascophyllum nodosum dioecious) TTAGCAACGCGGCACCGACCCCCTCGAGGTTATTTGTTCGCTTTCACAGC
TTGGAAACAAAGTTCTTGGGCCTGGTTAGCCCGTAACAGCGAAAGCTCGG
AAAAGGAATCGCGTTGGGCTTGGAGGCTACTGGGTGGCCTAGGGATAAAA
TGAACAATGCTCCAGCGGATCCGCTGTCCTGGTACTACGACATCCCGATA
GTGACTCGTGTTTACCTCACAGGAGCCTTCATGACCACGGTGAGCGAGAT
AGTATCGGACAAACGATACCCCTACTCTTTTCAAGTCCTGTTTGTTTTTC
TGGAAGCACGGACTTGACACGACATCTCTTCGATCCAACGCTGCTGTCTA
TCCACGTGTCGTAACCTGCTGTTCGAAGAGCTATCGCGTCAGCAGAATTC
AGGCCATTTTGTGGAGAAAGTCACTGACCATAGTACTGCTGTTTGGCTAA
CTATTTCTTATACTTCTTAGACCTCAGAGCTCTGCCAATTTCCCCGCTTC
TGCTGGATGAGGATCCAAACCTACAGGAAATACGGAATCCAAGGAACTGT
CAAAAGCTGCGCGCCCCTTGTCCAGCATCACATGACGATTTTGTTTTTTT
AGGGCAATTGTAGCAAGGCGTTTTGAAGCACCTGGAAACAGAAAGCCCCC
CTCCCCCCGTCGAGTGACATGTGTCCGTGCATCAATCGAAAATTGAGGTG
CTGCTGCTGCAACACGTGACTTATCTGGACCACACCCATTTCTGTAGTAG
CTGTCCACACTCTATATGTTATTGATCGTGTGTCACAATGAAACATCGAG
GAGCCCGCCTAAACTCGAACGCGGGGACTGGGAGAAATTGTGTTGATCGT
GACTTCAAAATTGCAAACATGTAGAACTCGTTTTTCTTTTGCTTGTTGTT
GTCGTTGTTGTTTCTCACATACAGTGTGTTGATGGCCAGCACGAAAAATA
CTTTACACGGCGACCAATTCCGCTTGTGGTTTGCTCATTAGGGCCTGTAT
TAACCATGTTCCGAAAATCAAAATCGGAAAATCAAAACTCATTAAGCAAA
GTTTGATTTTAAAAAAAACACTGCGAGCCATACTAACGGAAAACACTCGA
ACGGGACTGTAGGGGGCTGTTTACGCCACCAGTATGTAAAACCTCTCGGC
GTTGGAAAAATCCAAGGGAACACCACACAGTCCTACTACTGCTTTACAGC
TGACCTCACCGTAATGGACAGTTCACAACAAGTGTGGGCTTCGACATTTT
ATTGTTTACCTTCCGTGCTTTCGACGTGCGGGTGGACAGTAACCTAACTC
GCTTCCAATGTTGGTGGTGGTGACTGTGGTGCTTTTGTTATTTAAAGAAA
AATCTGAAGGCGCCTAGACCTTCAGAGCACCCCCCGGTCAGGGGGAAAAT
GTCAATTTGTCGCGTAGAACGGCGTGCAAAGAATCAGGCCCGTGGTCACA
AATCGAAAAATGACACGTGCCAGAAGGGAAGTAGGGAATGAATGCCGTTT
GTACAAACACTTCGTTGTGGCTGCGAAATAATAAAAGGGTAGGTAGAGAA
ATAGCGATATTATTGTATGAGGTACCCTTGAACAAAGACAGAGAGAGATA
GAGGGAGAGAAAGAGAGGCAACAGCAGCAGCAGAACTACTGATACATAGT
ACACATACGAAGTCTATATCTGTGCTGAGGTAGTAGGGACTAAATGCCAT
TTGTACAAACACTTCGTTGTAGCTGCGAAAAAATAAAAGGGCAGGTAGAG
AAATGGCATCTCGCCGTGGGACCGTTGGCGTGGGCCATGCCAGCAGAAGT
TGTGTGTATGGTGTGGCGGTGTAGTCTCTCTACGTGCTGCTGTTGTAAAA
CTGCTGTGCTCTGGCCTCTGGCGTGTAGCATTCGGAAAGCCTTCGATCAG
GTGAACACCTCCTATTTTGATTTTCCAAAAAATAAACATTTAAGTCCCTG
GGGACTTCTTTGGTTTGGCAGCGATTTCCAAAAAATAAACTGGCGTAGTC
AGGAGGTTTTAGAACCTCGACCAATCAGAGCCCAATTTTGATTTTAATTT
TTTCCGATTTTGATTTTCGGAACATCGTTAACACAGGCCCTTAGGGAAAA
GACAAAAAAAAAAAAAAAAACTGGCAACGCACGCCCCTCCCCCCCACGCT
CTCGGTACGGAGGAAAAACACACAACACATCCACATGTCTAGGCACAACG
GAGGTCTCGGCCGGTCTCGTGCCCATAAAATATGTCTTCGACTCGTCAAC
TAGGCCAGTTGGTGTCGCTTCGCAAGTTCTACGCTTCCATGTTCAAGATA
ACAACTTTCCTAGTCAGATTCACATATCTCTTCTCATGGCGATATCTAGC
CTCGTCTTCCTCTCCTTTCCTCCACGCGGCGGTAAACCTCCTCCCACCTT
CCTTGACCGTCTCAACCCACATTCCTACCTCCAGTGCCTTCGTTTTCCAG
CCCCCCGCTATGCCAAATGGCCCGGACGTCGCTCACGCACCATTTTCTCA
TTCCCGTCCCGTCCTCTCCGCACTATACCCTCAAGGTTTCCTAACACAAT
TCGCTTTGGCAACCGCCCGCCTCTCATTCGAATGAGCGTCCCCGCCCACT
AAAGTCTTCTCGTGCGCAACGTTGTCTCAATGCTCTCCCATCCAGCTTTC
TTGAAAGCACGGTTGTAAGAAGTGCATCCATACAGGAGAATCTCGATTGC
CTTTGCCTTTACCATTAGGGTCTTGGGGGAGAGTGCCACTCTCTGCAAGT
CGTAGACTTCACGTAGGTACCGCGTGACGCGCATCCAGCATGCACGGGTC
CGCCTGGCGATTTCAATGGACATGTCCTGGGTTTCGGTCACGGCGCCCCC
CAGGTAGGTGAAGGATTGCACCTTTTGGTGGAGTCGCCCGGTCTGTTGGA
CTCGCGTCATCGTCCGCAGTGGATGCGGTGGAGACATGCACACGGTCTGT
GTCTTCTTCTCAAAGACGTTCAAGGCGAAGGCTCGTAAGCGCTGCTGTGT
TGTGGGGCAATGTTCAACTCGGATCTGAACCTATTCAGTAACCCATTTAA
AACTACGTGAAACTGAAAGGATGTACTCGGGACGGGACTGTCGAACCTAA
TTCGAGAGACCAGAATCTCAGGTGCGACCAGGGACAGGAATAATTCTTCC
CTTTTGAGCAGACCACGGGCAGAAATGGAGAGCATGATACGGTTGGCGCC
CAATCTGCTGAAAGATCACAGACACTAACCCGTACTACATATTAATATAG
TTCTGCTCCAAATACTTGATGCCTGGCCCGTGGTAAGGACTGGTGTCGTA
GTACAGTACTCGTGCTACAGCTGGCGGACGTCTATTCTCGACGGCACTCG
ATGTATGGTCAGCACTTTTAGGAGAGCATGGGTCAACCGGGTATGGTTGC
CAATCCTGCTTGTGGTCAGCTGGACGGGGAAATCCATTTGTTCCCTTACC
CGCTCGCGTCTGCGATTTTGGTGACACGAGACGGGTTCGGCCGTCCCGTT
CCACGTCAACTCACCCATTCTCTCCCAACAAAGCTGAATCATCAATCTGG
TGCTTACTCACGGGATTCCTCCTGCTTTCCACGATGGCGTCCATCTATAC
CGTCAACCGCCATCGGGTCAGTCCCGAGTTTTTCGGGTAACGCAATTGTG
TACCGATGGTGTTCACCGCCGAGAGTCCGCCGGCACAGGGCCAGTAGTCT
TGAAGATAGCTCGAGTAACGGGTGCTGCCTTTTCAGGAAACCCCACGGAC
CAATTTCTGTGCGCCTCTTTTTTCCCACACCCACTAATGGTACAGCAATA
GTTTCATGTGCGATTTGAAATTGTGAAACGATTGATTGACCTGGCTTCGA
TCCCTCGTGTCGTAGCGCTCTTTCCTACCAAAGTTGGAGGCGAATCTATT
TGACACGAAAATAAGCCTTATCTGTTGAATTCCGTGGCGATGCCAAAATG
TCGTGGGTCGTGGGGAGATAAAACTCATGAGGGCGGAAAAAAATAACCGA
CACGGATAAGTGCAAGGATGGCGACCTTGGGTTGATGCGACACCCCTCTC
TTGAAAAGGACGCCACTGTCGTCAGGAATCTCCCGGGAGTTGAACAACTC
CATGTCAATTTGGCGTCAACGGTAGGGCGGTGGTCAAGACATTCTCCGGA
AAGCGGCGCCAGCTAGATCGGTGAAGCGCGAATCCTGCAATGCCGTCTGC
TAGGAAGACTTCGGAACCGCAAGAGGGGACTCTCGTCGTAAGAATGAGCA
CAATAAAGTACAGCGAGGAAATATCTCCAGAGGCTGCTTCCGGGCGAATG
CCCATAACGTCTGAGACGCCATTGAGCGTAGAGGGGAGCATCGGAGGAAA
TACTTAGAGGCTGCTGCAGGGCGAATGCCCATAACATCTGAGACGCCATG
GGGTTTAGAAGGAAGCATCGGGGTTAATACATCGCAGGGTGCTTCCGGGA
GAATTCCGGAAACAGTCAAGACGCCATCGAGCGTACCCGGAAGCTCAGAA
AGTGCGGAATTCGAACATATATGCACCGGGGATGTCTTGACCACCGTCCT
ACCGTCGACTATGGAGTTTCTCAACTCCCAGAAGATTCTCGACAGCAGGG
GCGTCCTCTTCAAGAGAGAGAACAGGCAACATAAGGATGGGTGACTAGTT
TATTCGTTAACTTTCGTCCCGATGAAGTACCAACCGACTTACTTTCAGAA
TAGAGACACAAGGAGTCTACACGCAAACCAAATTACATGTTCCAGACTAA
ACAAGTGGGGGTCCACACCGCCCTAGAATCAAACAATTATGCCGCAACCT
CCGACCAGTCATCTATCACCACGAAATACCTTTCCCGAAGGGAACACACC
TGTCAACACTATTACACGGGTTGGAACGTACACCCGAAAAAGCTACCGAA
GGCTATGGAAAACCCGAAAGCAGTGGGACCGGATGGCTTTCCCACAGAAC
TCCTGAAACTCGGACTACAGCAGTACCGCACTACGGTATCTTCTTGGAGT
GACATCGACTTATCACCCTCATTTGGCGCGAGACAAGGGTTACACAGCAG
TGGAAATAGACGGCCATTACAACCAGCACTCCATAACGTGCTTCTTTCTT
TTTTTCCTTGTTTCTTTGGAGATGTCGCTTTTTCCGAGTATTTTTTGTAC
CATTACCGCTTTCTTGTTGTATGAAGAGTACGTCGTACGTTCTTTCCTTC
CGAATGGTGTTTTTCTACCTTGTAACCTCGGGCTGCATATTTTACATCAG
CTTATGTGATGATAAAAAATAAAAAAATGACGTGCAACGAAGTGCGAGAC
CTACCAAGGCATGTCGCTCGTGTTTCACGCGAGCAAGGTGCTCCCTAAAA
AGTAATCGCAAAGAGACTTAGCAATTATTGTGAGGTCAGGTGGCCGTTAT
CGGAGAAGAAAGGCGGCTTTCGCCCGGTTGGCTCGAATACGGACACGATG
TGCCCAAGCTGCTGGAAATGAGACGGAAGGTGGCAGTGTGACTATTCCCG
CGCTTGATGGACCTCCAGAAAGCATACGAATTTGTCGACCGTACCCTTCT
GGGGTAGTTACTTATCCGCCTGGGGGTGTACCGCCGCAGATGATGGCAAT
TATGCGACAAGTCTACATTAGGGTGAAAGGAGCTTGTGCGCGATCCGAAG
ACAGGGTTTGTTCGGACGGGTTCGAGGTGGAGCAGGCGCCAAAGACAACA
GTGTGTGCTATCCCCTCTGCTGCTCAAAATCTCCTTCGCTGAAGTATTGA
TGTCATGAAAAAGATAAGACTCCAAATTGCGAATAGATCACCGCTGTCAC
AGCAAGATGCTAGGATGAGTTTCCATCTATACATTGTGAGATTCGTGTTC
AGGATATCAGTATCACTGCTCTGGAAGCCCCACCGAAGACCATCTTTTAT
GGGCATCGGAATTGGATCTGGTCCTTTTCGCGGATCGTACAAATGCGGAG
CCCAAATCCAATCTGTCTATTTTATGGGACGTGGGAGGTTTGCAACGATT
TGAACGGCGTGTGTGCATTTTTCTAGCTGTCTGTTTTTAAAATATTTGAA
TGCATCGCACGTGCCTCGCCAACAGGAAGCAGCACGGCAACTTGAGAGTG
GATCATCATACATAGAGGGACCATCGCCATCGTGGCTGAGTCTCTGTTTT
TCGCGAGGAACGATAGGTTACAACAACACAATACTCGTCTTTCAGGTTTA
AACCATTTACGCATGTTGTACTGGACTGTCTGCACAGGCCAGTATTGTCT
ACTGTATAAAAGTATATTACAGTCTACTGTAGTACAGTACGGTATTATGT
CTGTACTTGGAGTCATCTCAAACCCAAACCATATACATTGCATTTTTGGA
AGAAATAGTAACAACTCTGACTGACCTTCAGCACTACATGTATATACTGC
CTCCCTGTCAAGTACCTTGCAGCCAATGAGAACCGCTTTCGGTGCTTTGC
CAGCTGCACAAGCTCCAAGAACTTGTACGAGATGCGAAAATGTCTGCGAA
ATTTCCTGTACTCTCTGGAGTCGCGTTGTTCCAGCTCTGGTTTTCTAAGC
ATTAGACTATCTGGAGAAATCCAATCGTGGGTGGACTCGCCGAGAACGCT
TGACGCGGGGACCATCGCCATCCTCGCTCTCTTCTCCCTCCGCCGTTTCC
ATGTCCTTTAGCCCGTCCAAAATCAGAGCCTACTCGGCCAAGGTCCTGGC
GCGTTGCCATTTCTCATAGGTTAAGAACACAACCAGAGCTAGAGCGAGCG
CTCCCCAGAGGCGTCCATCGCGGTCGTCCGACGCCATGAGATCAACCGAC
GTGTTGTGTAGATGCTCAAAGTGATGTGTGCCGAGGACAGCCCTCTCTGC
CTTGATGGGAGCTCAACGTGTGCTGGGTTGGCCGCTATGCCGGATGGTAA
CTTCGTACTTTCAAAGGCACACGCCTACAAGTCAAATCGAAAACAGCAAA
TACGATTGTCCTCGACTCCATCGTATTTGGGTCCCAAATACGACGGAGTC
GAAGGCAAAAAAGATATTGGATTTGAGCGCGTCGTATTTGGCAGTACAAC
CCCATAAAATAGGACTATCGGTTTTAAGGTCCCCAAATTCCCAGATCCAA
TTCCGATATACCCCAAATACGATGCCCATAAAGATGGTCTAATGACAGAC
ATCGATGGGGCCCGAGTGTGTTGCGGACCACGTACATCGTGCCTTGTGGG
ACATGCTGTAGACGAATGACTCCCGTAGAGTTTCGCGATCGCTGTGGGGG
CTTTTGCTAAAATGATTGATGCTATCGTGAAGATGTGCGGAACCTTCGCC
CTAGCGACATGCCTCCACCTCCACCCTGTACACGGCCGACGATGATGGGG
ATCAAAGCGGTCGGGCAAACGTACGAACGGATTCAATCCTTCGTTTTACT
TGGGCGGTGCCATTACCGAAAGCCTGGGCATGCCCGCCAGAACCGCCAGG
CGAGCTTGCGCGCGTACTGGACGCGCATCAGGCGATCAATGCCTTCGTGA
GCTATACGGGCCAACCGAAATGAAGTCTTTCCATTAAGACCCGATTAATC
AAGGCCGAGGCAGTCGAGGCTCTTCTGTACGGATGCAGGGATTGAGCCCT
TCGCTAGGACCACTTTAAATGGAAAACTCCGCACCGCACACCGTCGGGTC
TTGCTAGGCATCATCGGGGCAAAAGGTGTAAAAAAGGGCTACGAAGACCC
GTTTAATCAAGGCCGAGGTAATCGAGGCTCTTCTGTACGGATGCAGGGAT
TGAGACCATCGCTAGGACCACTTTAAATGGAAAATTCCGCACCGCACACC
GCCGGGTCTTGCTAGGCATCATCGGGGCAAAACGTGTAAAAAGGGGCTAC
GGTTTCATCTCCTACAAACACGCTCTCGGGATAACTGAGTGGGAGAACAT
AGGGAGAAGCGAGCGCACAAGACGCAGGTGGGTGGGGACGCACAGCCGCA
TTAACGACGGGCGGTAACCAAAGCGAGTCGTAATCGAGAATTGCAATCGA
GAATCGTAATCGAGAATCTCGAAGGTGCCATTGGATAGGGGGCGGGGTTG
GGAAGGAACAATAATTGGTCGACTACTTGGAGAGCGACGTTCGGGCGTTT
GGTGTATACCTGCTGACTGGAAAGCGTTGGAGGCGGGGTATGGAACGAGA
CCGTTGCGGAGGGGGGGGGGTTATGGCCGTGTGGAGAAAAGAGGAGGAAA
ACGCGCCTAGAACCAGCCAGGAGAGTAGATGAGCATATACAGCTTGAAAG
GTGGTTACCCCGCCAGGGGTGTGTAACCGTCAAAAAAGCGACGCCGCGTG
TAGTAGACTATTATTACCGTGTATGGTATATCATTAATAGCGGAAGGCAC
TCCAGACGGGAGCAAGACGGGCAGAGGCCTGCGTAACGCAGGGTATATCA
TTAATAGCGGAAGGCACTCCAGACGGGAGCAAGACGGGCAGAGGCCTGCG
TAACGCAGCGCCCCCTCTAATCGCCTGTTCTATTTCTTGTACATTTTTTT
TTGCTCTGTATTTTTACACCTCCGTGTCGGCAGCGGTAAGTACATTCTAC
TAATACCAGTATTAATACAGTAGTAGAAATCGAGACACAGCTAGCTCTCT
CCGATGCTGCTTTGTTTTGTTTTTTGTTTTGTTTTGTTTTAGAGTACACG
CTGCTACCTGGTGGGCTGCCCATGTTAGCCTTTTTTCCCGTCTGTTTTAT
TAATATGATAGCAACAACCACGCCCAGCAGACTTATCTGGCGAACCAGAA
ATGTCGACCAAAAGTTCAAAGTGCGGCGCAACCCCAAACGATTCACTCTA
TTTTTATTTTATTTTAATCACCTTTGGCTCACTGAACTGAGCGAAAGGCA
TCAGTGGTTGGAGAAGTAAGATTAGAGGCACCAGGCCTGACGTTAAACGA
TGCCGAGATAATGGCTGCAGAACTACTCAACATGGCCGTAACCCCCCGCC
CGAACTCCTGGGCTGCAGAGTTAAGTCCGGCTGATTTTGTAATTGGGTGG
GGCCGCGAAGTCCCGAGTCAAACGAGCCCTGACCTAGCTCCCTCGCCCTG
ACTCAAACGACTTGACTTGGTCGGAGCTGCTTTGTGAAGACGAAGCTTCA
AGACCCCTCCTCTCAAGGGACAACGACATTGCGTGAGCGCTTTCCTGTCC
CACACGAGGTAGTTACGCCAGAGTTCATACAAAAGTAATTTTGGTGACCT
ACCCCGCTGATGGATGAGATCTGTACAATCCTTCCGCGCCGACGTAGAGG
GGGATCGAAAGTGTCCGTAAAGCAGACGTCCCGTGAAGAATGCCGAGCAG
TGCACGTCGACGTGAGCAGCTCAAGAAGCAGTACACTTGGGGTCGTTCGT
GCATTCCCAGAGGCCGTCGTCACGGAAATCTTGAAAGTTCAGAGTTGTAT
ATATTTATGAATGGTGATCACATGTAGGAGAGTATGGATCAACCGGGTAA
GGTTGCCAATCCTGCTCGTGGTCAGCTGAACCGATAAATTTAATTTTTCC
CTGTCCCCGTTCGCGCCTGAGACGGGACGAGTTCGGCCGTCCCGTCCCTG
CGTCAGCCTGCTCATCTCCATACTCAGGCTAAATCTTGTGCTTACTCACG
GGATTCCTCCCGATTTCCGCAGCGGCGTCCATTTATTTACTTAAGCCGCC
ATACGCCATCGGGTCAGTCCCGCGTTTATTGAGTCACGCAATTGCGTACC
GATGACATTCACTGTCGAGATTCCGCCGGCACAGGGCCAGCAGTTCTCAA
GGTAGTTCCAGTAACGGGTGCTGCCTTAGCAGGTCTCATCATGGACTATG
ACCAATTAATGTGCGCCTTTCTTTCCCCACAACCACTATTGGTATAAAGT
GGGCATGTTGAAAGTATCGGAACACCCACCGTAAGTCTTCCGCTGTGTAC
CCGCATGTTGTACCCGGGATGCGTTATGACGCTATTAATAGCAGAAAAAA
CGCCTTCCAGTGACAAACGCTTCATCCATTTTTTCTCTGAAAGGATAAAT
GGCGGGAATTTGAACATCCGACGTTAATACAAACTTAGACTAGAAAAACA
ATCAGTTTGAATCCAAGCCGGAGGAGGTTGAAAATGCAAATCAAACTTAA
ATCGATATGATACACGCCAGCGCTCCGTGCGCATACGAAAATGCCTAAAA
TGTTTATTTCGCGATAAAAAGAGGAGCCTGTATAACCCATTGTTGTGTAG
AGCAAAATTATATAAACTCTCCTCTACGTAAAAGATAAAATTACCATGGA
CGACACTCTTTTTTCCTTTGAATTTCCCGGGAGAGCTACAACTCGGTCTT
CTGGATTCATTTCTGTAGACGATTAAAAAATAAATAATGAAATAAAATAT
CATCGAAAAGGCGGGAAAAAAACAGACTTGCCATTTGTGTCCCTCTGACA
TTCGCCAACTCTCCACAATGATTGGCCTCGTTGAGCAACTTTTACGGCTT
GATTTGTTTATGTGGTGATTTTGAACCTCGGGAAACCAGGACAGAATCTT
TCGCAAGCAGAAAAACCTGACGAACCACTAGCGCTTTTGCACTTCGGAAA
GTCAGATGTTTTAGTAATATGCCGGTTTTGGGGGTACCTGGTGGCGTGAA
AGGTTGGTTAAAATTTGGTTTGAGACCCTTTTTTATACGGGTTACCCTGA
CGTGATTGAAAAAGTAGTAACTTTTAAGAACTCGTCGCCCTATTCATAGT
CTATTATAGTGCAGTAGTCTCGTGGATAACCTCGCACAATTTCTAGTGCG
GATTTCGTGAGTTCGAGTCTCGACAGGATTATTTCTTTTTGTTTTTTGCT
TTCCTTGTAGCGTGAAGCGTGATAACGTGAGTCAGGTAAAATTGATCAAT
ATAATTGTTGGTTGACGGGGGGTGTAAGTGTGCTGAGCTTGCATCGTGGT
AAAAAGTCGTACTAATAAGAGGCGAAAACCAGAGAGAGAGGGGAAGATCC
TTCGTGACCACAGGCATTAACACTAACAGGATGGCAACGTTGCATTAGGT
GGGACTGGTAACCTGGCATGACGTTAAAGCCGTTCGTCTGAAAGCAGTAA
CAATTCGTGCAAAAACTATATAATAGCACATCACGCAACCAAAATGGGAA
TGCGTAAGGGCCGGTCGTAAACGACATTTCCATTTTATTTTCCAGTTTCC
ATTTGGAAATGTCCCAAAGTTGACCGATCTTGACAACATTTTCATTTTTT
CCAATTTCCATTTGGAAATATTCTAGAGTTGACGTAATGCTTGAAATAAG
TGTCTTTTACGTATTATCTGTTCTCGTTTGGAATCGCTTTTAACGTTTTC
CGAGCTCTTGGGAAAATCACAGACGCTCATTTTCAGTAATAATACACTAT
AAATACAGTATAAATACAGTTCATGCCACCTCGAGGATGACCGATAGTAG
CTGATCTAAGCGCGTCAGATAGATACAGGTTCTTCGTCGGACAGGCTTCA
CATGCCTGACATGGGCCTCACCAAGTATCATACGGCATGGACTATGACTA
TGACATTGTTGCTGGTGTGGTGTTCGTAGGAATACCCCAAAGAAACTGCG
AAGATAGGACTGTCGAGGTTGTACAATAGCTCGACCTCCAATGACACTAC
TGCAATAAAGTTGTGCTGTGGGGCTCGCGGTGATGCCAGATCCTCGTGTA
TCGGAGAGACACGGGTACAAGGCAGCCCCGCCGCGAGTCTCGAGACATCG
GTGCAGATTGTGGTCACTTTGCTGTTGATCCGCGGGGGGTAGAGCGCTAT
CACAGACGAGGTCTTCGGAGGTTAAGGAGACCCCAGGAGGCGTACTTTCC
AGCATTGGAAATGCAAAATAAAAATGAAAACGTTTGGAACGTCCACTTCC
AAGGTTGAAACCGGGTTTCCTCAGAGGCGTTTTTTATGGAAAGTTTGGAG
AGAAAAAATGTGTCGTTAAAAATCGACGCTACGCCTCGTACTCTAGACAG
TACGCTCTCCGGATGTTCGGTATGGGCATCATCCTGACTGTATAATTAAC
ACGCTATAATATAATAGTGGGGTACAGAACACAGCATTACTCCATTACTA
CTTTGCGTTTTATTGAAAGTGATGCCGGGGAACTATAACAGAATACCGTC
TGCAGTTTGGGCCCTCTTAGGTGCATCGCGATGACATCCCCATTTCTTTT
CCCAACTAGCGACGGTATCCAAGTACCATGAAACGGCGCGAAGAAACTTT
CTGGCACGGAAGAGAAGATAAGGGAGTGCAGCGCCTGTTTACGCCATCGG
CGTTGGGAGGCGCCTCTCTTATAATTTTTACGAGCTTCACGAACACTGTG
GCAATTGGTAAAAATGCTAACGATAGCGTCTCCTGAAAATAGTCTCTTAC
ATCTGGACGTGCGAATCACCCTCATGCGTGAGCACAATTTCCCGCACGCC
AACGTATAGCCTTACTCCCGGCGAGCGAAGATCCCTTCGAGTACCCTTCG
CGCGCGGCTCTGCCGGTCGCCATCGTTTCCCGCCTCGCCGCCACTTTCAC
AATCACGTCGAAGTCCAGACAAGCACCAGCCCAGTCCTCGTCTGGCCTCC
AACATCTGACAAAAGCTGCACACAGAAGCCTCTTCCAACAAAAGCTGCAC
GCTCATGATGATACTCGCCATCGTGGTGAACTCGTCGCCGAAGGTATGAT
CATGCTTCGATAGTGCTCGAGACAGGCACCGCGGGAGACCGTAAGCTCTT
TTCCCCACAAAAGGGTGGCTGCGAGTCCAAACCATCCGTTGGGGCCATCT
GTACCTGTATCTGCTCTGTATGCGTACGAGCGAAATGCTCTTCCTACCTA
ATAATACCACGATCGCCCTTATGACCGACCCTTTTATCTTCCAAGGAAAA
CTTGCCCGCTCGAAGACTGCTTTGAAGTTACGTCGCTTTGTTGGAAACCA
GATCCTTGGAAGTAGCGATCTCTGAGCTCCGAGTGATATGAGTCTGAGAT
TTTTTCCCCCCGGAATATTACACATTATTTGGTCATATTTGGCGATTTTC
CACCCCCCCCCCCCCCCCACCAAATAAAACAAAATAATATGACCGTTGTG
TTTGTTTTCAATTCCCTTTTCTTCTGGTGGTCGGGTTTCCATTAATTTAG
CTGCACTATCGTAGCAGGGAAGAAAAACGTGTGTGGAAGTTCTGGCGGGG
GGTACCGCAGTTTATATAAAATATATTTCTTTGAAAATACTCATGGGTGG
CAGTGCTGTATGAAATCATAGGCACCGGTTACCGTCTTTGCCTCAGTTTC
ATCCATGGCGTCGGAACTGCGTTAATTATTAATAGCGGTGTAACAACACC
GAAAGTGAAAGTGGAATGTCCGGGAATTTGACGATTCTTTGTTGCTGTCG
GAATCGAACCAACGACTCGTCGCACTTACACTGAGTAGCACCCGCGGTTA
TTCTACCTCCCGTCATAGTCTAAGAGAATGGAAGGCCTCTGATGGCTGAA
ATGGTAATGGTTGGTAAAACACAACGTGAGGCCACAGTACTGCCTCACTT
AATCCCTTGAGGGTAACGGTACTGTTGTATTATTAATAGTAGCACATGTT
GTTGTGAAATAGAATGCTTTGAACTGCAGATGACAGCACCGGCACCCTAT
GCTTCATCCCCGACATCGTACTACGGCAGCATAGTATTTAATACATTGTA
TCGTCGTCTTCTCCCCCCGCCCCAATTTGCCGGGAGAGGGCAAAACTGCG
ACGGCTACCTTAAAAACTGCGGGTTCTACCGTACCTACCTGGCAAACCGC
ACGCTGTGTACAGCGGTGTTTTTGTTTTGAGTCAGTCGCAGCTCTTTGTC
GCCCATCATCCCAGGCGGCCACCGGTCTGCAAGACGTCGAAGAGACACCC
AAAAAGCCTGCCAAGGTCAACAAAAACTCCACCCAATCCAGGACTTCCGG
GCGAAAATAAGGGGGAGGGGCGAAAATCACCTACAAATGCAGCCTAAATT
CTCAAACTTGGAAAAATATTTCCCAATTTCTAGGGTAAGGTGGTCGGATT
CTTTTTTGTCGATTGGTAAAAATCGGCGAGTGTTTTTGGCTCCGGGCCTC
GACATAGCGCGGGCAAATCAGAAACCGTTGTTGACATAGCGCGGACCAAT
CACTTGGCTGTTTTTGACATAGCCACCAATTTACGCCGCCTAAATATCGG
GGCTTGGCGCCTAAAATTTTCAGCTTCGGCCGCTCGGGTAAGCTTCCAGC
AAGCACTCTTCAGCCACCCTTCAGCTTCCCCAGCACTAAAATCAAGCACC
CTTCAGACCCTTCAGCTTCCAGCACTAAATATCTGGCCGCCCGGGTAAGC
TTCCAGCAAGCACCCTTGCTTCCAGCACCTCCGATGGCTTCTCCGATGGG
GCGCCCAGTCGGCTCGAAAACAGTCAACAAGACGCCAGGCAATACTAGAG
TACAGTTTGTTTTAGACATGGCCACCAAACTTTATACGCTCGATGCAATA
CTAGATTACAGTTTGTTTTAGGCACAGCCACCAAACTTGATAGGCTCGAT
GTAATACTAGAGTACAGTAAGGCTTGAATACGCGAGGAAAAACTAGTACC
GAGCATACAACAAGCAAAGCGGCTCGACTTGGACTGAGATGATACTTCGG
CCGCCTGTGTATTGCGACGCCCCTTCTAGCATACCTGGTATGTAAGTATA
TTACTGTCTAAACGGTAGTGGTACGCTCATCTTGAGCTGCTTCACTGCCC
TCGCACAGGATCTACTCTAGTCTACATGTTTTGGAATGCACCACCGTTGT
ATTACGGGAGAGTTCTGCCATTTAGGCCTGGCAAGGGGCACAAATATTAT
CATGTGCTGTTCGTCCCCAGACTTTCTGTGCATTCTCGAAGAGAGGTTCA
AACTTCTCCTCTGTCGCGTGTGGGATGGCTAGTGAAACGATAGCGACCTA
CATGGGACTCAGGGATGGCACGATCGGGCAGCATAGGCATTCTTCGACTT
TTTCGTGGTCATACTCAGCATATTCAAATCTAGTAGAACAGAGTATTACT
CACAGAAATGTGTCACAAGAGTATTTTTTTTGCTCTGTCAAAATGTGTAT
GAAATAATTAATAGGTGTACTACACGCTCTTTGTGAAAACCTCAATCACT
TGATACAGCAGCCTATTACCTATTACACGTAACACAAAAAGAACCAAACG
AACCAACACGCCCGAACCCCGGCCAGCAGGAGTGCCTGTGGATGATGCCA
TCAATATCACCGCTTTATTACCTGCAAAACGCTCCACTGCTGTGCACCAT
CAATGACATCAACACAAAAGAAAAGGCAACCAACCATCAACCCTCAGAAC
CACGGTTTCAATGATCGCGTGCTTCGCCCGCGTAATTAAACTCTCAAAAC
CCTGTTCCGGAACCTAAAAAAATTGCCTAAAAATTGCCAAAACGATCAGA
CAACCAGATTCAGCTTAATTGTGGAGAATGAGCAGGCTGACGCGGGACGA
GACGGCCGAACCTGTCTCGCGAGACTTAATTCTCGGGCGCGAACTGGGAC
AGGAAAATATCAACGTCTTTGTTCAGCTGACCTCGAGCAGGATTGGCAAC
CATACCCGAGGTTGTTCCATACTCTGCTGAAAGTGCTCACCACACACCTT
CGAACAAAACACATAACCCATCTGGTGGCATCTACAGGGTTTTCAACTGC
CCCGAAAACAAGATAAAACGTATAATATCTTGTTTTGAAATAATACCCAT
AATAGCTCTCTGGCTGTGCAAATCACGCATGGTTGTTGATTCGACTTTTG
GCTCCCTAGCTCAGATCAGCTCAGACCCTTTTGCCCCCCTTCGCGGCCTC
CGCACGTTGCTACCCCCCCGTCGAGCAGGCCCTGTGCCAGATTGACGCGA
TCTCGGCGGCGAAGCTGTTCTACAGCTGGCCGCTGATATGCAGGGGACAG
CTCTGGCGACTGGTGACCAACTTCTTCTACTTCGGATCGATGGACTTATA
CTTCCTCTTCCACATGTACTTTCTTGTAAGTATAAGATAGAGTATAAGAG
AGAGAGAGAGAGATAGAAACAACCCCCCCGCCCGCCCACCCCGCTGAGAG
AAGCGGGCAAGATACCACCTGGCGAGCGCAAGCTTTTGCCGACAGGAGCT
GTAGCAGTAGCCCGAAAAGTTTTCCGCGCCTCTCGCGCCGAAGAAAACGT
TGCACGATGATTGGTCGGTGGGGGGTCGTGTTCCGGCCCCAGCTCGGACG
AGACACATCTATTGTACAGCAGTATGTTTTTAGGGCGGTGCCAAGTGTTT
TCAACAGAAGAAGACAGTTCCGTCGTCCTGATGTTCCGACGTGTTTTTTT
GCCTCGGTGTTATGTTGCCGACAGTACCTGATGTATCCTCAAGGGGAGGT
GCGCCAACCAACTGTTTCGGGGACGATGCCCTCTGGGTTAGTTCTAGCTG
TGGGACAGGAACACGATGCCATCCTGTAATGAGACTAGAAATCAGGGGAC
ACTGGCCAGGCTAGGGGCATCTTCCACGCTGTTTTACGTACACACCACTG
TATTATACGGTACAGCATAGCTCTGATGTATACTCGTAGGCGCTTGTGGC
CAGTTCGCCATAAATAGTATCGTAGTTGAAGGAAAATAAATAATTAAAGA
GCATGAGGAAATCGAATGGGCTCCTCTTTTCATGTCTTCTTCAATACGCA
CAAAGTTTTAACCGCGGTTCTGGTCCTGGGGGGTGTGGGGTGCGCTGGAC
TGCCGACGTCGTGTCTCTCAGGTGAGATATAGCAGATTGCTGGAGGAGGG
AGAATTCAGAGGGAGAACCGGGGACTTCCTGTGGTTCTTGCTGTTTTGTG
CGTCGATCATGACGTTGTCGGCTCCCTTCGTGGAGATTTCGTTTCTTGGC
CGCCCGCTGGCGTTCATGATGGTCTACGTCTGGGGAAGGTGGGCGCTATT
TTCCCTCCTTGGGACTGGCCTCCGTGGGGGGAATTCCCACTTCACGTTAC
AGAACAGACGAATATTCGTCGCGCACAAGTTCAAGCTCGTGACGTCGCAC
GCAAGAAGTTTGCTGCGGTGCCGTCCACCGCCCTTTCCGGCAAATCCCGG
CCAGTGTTTTGCTTTCGTTGGCTCATTGGAGGACGGATCCTCGCGCTCCA
CTCGCCGACGGCGGTAACGTCACGCTGCACTGCCCTCGCCCCGAGGCTCA
TTCGTGAAATCGTTCCTAAGGTGGTGCCGAGCATGCTGCGCTTGGGTACT
GGACGGAGCATCATTGAGAACATGATTTTTTTTTTCCCTATTCTCCCCCT
CCTTTTTTGACTCGGCCTTTCCCCCGGTGTCAGGAGAAATGAGCACGTGC
GGATGAACATGCTCGGAATGTTCCCCTTCACGGCGCCCTACCTGGCGTGG
GTGCTGCTGGGCTTCAACGTCGTGATGCACTCGCCCCTGAATGCCGACTT
GGTGCGTAGTTCTTTGCTTACTGCTCTCGACGCGCGCCGGCTGTTGCCGA
ATGGTTTCAGGGTCCGCTCAGACGAGAATCCGTGCCGTAGGTTGGAAAAA
TCGACGGTGTGTTTCGATTGGTTCGTGTCCAACTGGGTATATATATTGGG
TAGTTGCTGCTTGTACCTTCTGCCATGAATGTACCATCTGCGAGGGTACT
CAAGTGTGCGGAATAATTACTCTTCCAACGATAAAACGTTTGAATCCTCT
GTACATGGAACATCTCCATGCTTGGTTTATATGGTTGGAGTAGACCAACC
AAACCCTTACGCCTGACGCAACCCTAACTTGTACCAGGAGGCTGTCTACA
GCAGGAACGCACTTCGTGTACATAGTATCAGTAGTATGTATAGCAAAAAA
AAGTGGTGAAGTCTGATGACTTCTGCCGTGGTTATAGAGCTCAGTACCAG
AGCTATGATACGAACTGTTGATTCGTGGCAAATCCGCGTTATTAGCAGAT
TGCGCGTTCGATGGTACGTTATTATCCTACTACTAGTGATACAACAGTAT
ACATACTTGTTTCTCGAGACAAGATGTTTCATTCATGTTATGCTCCCAGC
GGCACGAAAAAAACGTTGAAAAAAATCTGGACCCGATAGGTATGTTTCAT
GTTTCCTCCCCCCCGTTTCCATTTTCCCACGACTTAAAACGTTGTCGCGC
CGCACGTCTTCGCCTGCCCGACAGCTGGGTATCGCCGTGGGTCACGTGTA
TTACTTCCTGGAGTTTGTTTACCCGGAGGTAGCACAGATCCGTGGCTGGA
AAGTCAAACAGGTACAGCAATACCAGTAGGCCTTGTTTGCTCAGTTATGC
GAGATAACACAACTATTAATACTGCGACGTGTGGGTGTTTCAAAAGACTG
CGCCGCTTTTGACGTGCTTCCGCACTCGTCGCCCGAGTGTTCCTAGTGGG
TGACCTCGCACATCTACCATTTAGTACTGCGGAAGTCGTGAGTTCGATTC
TTGTGAAAAAACATGATTTTTATTCTGGCTTCCGTAGCGGAATGCGTGAG
AACGTGAGTAAGTGAAATTCAACCATTGGTTGAAAAGTTGTAAGAGTGAA
CTTGCATCGCGATAGAAATTCATAAGGCGAGAACCGGGAAGAGATGGGAA
GATCCTTCGTGACCCCCGGCAGGATGGCAACGTTACAGTAGGTGGGATTG
GTAATCAAGCACGTTGAGGCCCATCGGCCGTAAGTGAGATATAGAAAAAG
CAAGCACGTACGAGCAGTGGGGAGCTTGGCAAATGACCGTGTGGATAAGA
CGCGAAAGGTGTGCGCTTTTCTAGGTGTCAATATAAGTATGTTTGCGCAC
CTATGCTATACCTGTACCAAGCACGGCCTCCACATCCGATCATGGAAGTG
CAGCAGATATATTTTACGTATTCGTAGGAACTCTTCCGTATGCTCTGTTT
CCCCAGGAAAATCAAAGCGTGTACAGTATGCGTCTCATGGCTCATTTTTC
TGTGTCATGGTTTTTCTTTTGCCACCCTCTCTCCGCGACTCCTTTGCTTT
GCCTTGCTTCCTCTAAAACACAGCTGATGCGGGCACCGAAGGCGATACAG
CAGCTCTGTGGACAGATCCCTGCCGATCGCCCTCGCGATGTACCAGGCGT
TTTCCCAGCGCCAGACAACGGAGTCGACGGGGGCGGGCATTTGCATGTTG
ACTAAGTGAGGCTTTGAGGCCAAACTGCCGAATGTGTCATGACATGGATG
CGTGCTGCCCAAGGCTAGACGTGCTCGACGTACAAGTATTTTGTGCAGCA
CAAAATTGCTGCAATACAGTACGTATCCTGAAGAAGTGTTATGTCAATCT
ATAGTACGTAGATTCAGCAACAAGAGTCGTTCTCTTGACTAGTCTAATAT
AGTATCTTGTGTGGCTGCGACGAGCCGTTTGGAAAAATGTGGAAAATGCA
GCCTACATTAGTTTCCGTTTTCCTTCTCTCTCCGCCCAAGACTCGCGGGT
TTACTCCTTCTATAAAGTCAAAGAGCTGTGCTGTAGAGCCAGTACTAATG
GTTGAAAGAAAAATCTGAACTAATGCATCTAAACCTTGTTTTCGTATCAA
TATCAAAGATCATCCACCCTATCAGTGGGGGGAAATGTCAGAACGTTTAG
GTAGGAACAATGGCTGCAAGCAAGGACACACGTTTCTTCGTGGAATTCAA
ACATGCCATGGGTCGAAAGAGCGTCGCTTTTTCTGCTGTCTGCTCGTACC
GCTCAGTACAGTAGTTCCAATTACAGTAGTACTTGGGGAAGTTCCAAGAC
ATGAGTGAGGGTGCAGGTTTCAGTGGCTTTCCTTATACAAGTAGTAGTAC
TGTAGTAAAATACACCATTGATTTTACTACTCGTACTTGATATTGATAGT
AATACTGGTTTTGAGTGTTTATAAATGGAGTACTTGTAGAGCGTTCCTTT
CGCCTTTTGTTCGTGATTGCGGGTACAGTATTACGAATGTTGTTCTGTAG
T back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig864:279584..299484- >mRNA_A-nodosum_M_contig864.23.1 ID=mRNA_A-nodosum_M_contig864.23.1|Name=mRNA_A-nodosum_M_contig864.23.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=741bp|location=Sequence derived from alignment at A-nodosum_M_contig864:279584..299484- (Ascophyllum nodosum dioecious) ATGAACAATGCTCCAGCGGATCCGCTGTCCTGGTACTACGACATCCCGAT AGTGACTCGTGTTTACCTCACAGGAGCCTTCATGACCACGGCCCTGTGCC AGATTGACGCGATCTCGGCGGCGAAGCTGTTCTACAGCTGGCCGCTGATA TGCAGGGGACAGCTCTGGCGACTGGTGACCAACTTCTTCTACTTCGGATC GATGGACTTATACTTCCTCTTCCACATGTACTTTCTTGTGAGATATAGCA GATTGCTGGAGGAGGGAGAATTCAGAGGGAGAACCGGGGACTTCCTGTGG TTCTTGCTGTTTTGTGCGTCGATCATGACGTTGTCGGCTCCCTTCGTGGA GATTTCGTTTCTTGGCCGCCCGCTGGCGTTCATGATGGTCTACGTCTGGG GAAGGAGAAATGAGCACGTGCGGATGAACATGCTCGGAATGTTCCCCTTC ACGGCGCCCTACCTGGCGTGGGTGCTGCTGGGCTTCAACGTCGTGATGCA CTCGCCCCTGAATGCCGACTTGCTGGGTATCGCCGTGGGTCACGTGTATT ACTTCCTGGAGTTTGTTTACCCGGAGGTAGCACAGATCCGTGGCTGGAAA GTCAAACAGCTGATGCGGGCACCGAAGGCGATACAGCAGCTCTGTGGACA GATCCCTGCCGATCGCCCTCGCGATGTACCAGGCGTTTTCCCAGCGCCAG ACAACGGAGTCGACGGGGGCGGGCATTTGCATGTTGACTAA back to top
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