prot_A-nodosum_M_contig863.6.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig863.6.2
Unique Nameprot_A-nodosum_M_contig863.6.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length350
Homology
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BLAST of mRNA_A-nodosum_M_contig863.6.2 vs. uniprot
Match: D7FLR1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLR1_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 7.170e-38
Identity = 72/96 (75.00%), Postives = 85/96 (88.54%), Query Frame = 0 
Query:    1 MISGDSTASHMGSVKNIEKARERRTFETMPGSSQTGVPDDLLQHAETVHPRMGYDMSDSIFMQEMQAADRQKESKKALEERSALEAFRAAAIQKHF 96
            MISGDSTASHMGSVKNIEKARERRTFE MPGSS   +PD+L +  +T+HPRMGYDMSDS+FMQ  +AA R+KES++ALEER+ALEAFRAAA++K F
Sbjct:    1 MISGDSTASHMGSVKNIEKARERRTFEVMPGSSAADLPDELQEQTQTIHPRMGYDMSDSLFMQHQEAAGREKESRRALEERAALEAFRAAALKKPF 96
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig863.6.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLR1_ECTSI7.170e-3875.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..195
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 93..226
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig863contigA-nodosum_M_contig863:34226..52995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig863.6.2mRNA_A-nodosum_M_contig863.6.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig863 33744..55249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig863.6.2 ID=prot_A-nodosum_M_contig863.6.2|Name=mRNA_A-nodosum_M_contig863.6.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=350bp
MISGDSTASHMGSVKNIEKARERRTFETMPGSSQTGVPDDLLQHAETVHP
RMGYDMSDSIFMQEMQAADRQKESKKALEERSALEAFRAAAIQKHFKRLA
PDKSGGKSDSGRGTAGDGSADDVDNKGKKEKRSGGPPPPIAGIKIRKKKR
QPPPKPQQQQQQKQALDKGGFGMQEGIGSSSRETPRDDRGTKRSIVPADG
DGAVGDREEGENEEEGRRESSNSGKKKERWWLQEQRRRQASEFVGRSDGG
GWRWRCCCVCGERRRIGASSGGGWKTRRSGERGRFARCGERRGRAVWGSG
WWRTRAGTTRTTTIRIRKMLDLSARAVTSNERKRENTSVCAVLCCAGAR*
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