mRNA_A-nodosum_M_contig8568.2.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig8568.2.1
Unique NamemRNA_A-nodosum_M_contig8568.2.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A6H5L973_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L973_9PHAE)

HSP 1 Score: 439 bits (1128), Expect = 3.810e-151
Identity = 227/325 (69.85%), Postives = 259/325 (79.69%), Query Frame = 1
Query:   25 LVACAAAVLLAPSEAFTGGLNLAASS----RHQIGRRRMTNMMAIDPITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            L+ CAA   +AP+ AFTGG  LA ++    R          MMAIDP TVH++G++VNAVGS GLD TWLSHV+HG++DAAA     V +E    NP   WI FIRSSVL IN FYKG+G+EQSFGL+IVTFTL VKTLLVPLQ IQLQSSEKMQ LQPTVK+IN KFGQNKEAA+AAT+RLY+ TKVNPLIGCLPALLQ    FPVFIGLYRAI+GFGT+AVANE FLW+PSLQGPTF+ GRGIGWL  +VDG P LGWHDTLCY++IP ILVLSQKLSM+LL  P+   DD   SS++TVI YLP+LIGWFSLNVPSALGIYW
Sbjct:   10 LLGCAA---IAPTAAFTGGAGLARAAGGRDRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFSLWIEFIRSSVLGINDFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMQVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQ----FPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYW 327          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: D7FS38_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS38_ECTSI)

HSP 1 Score: 387 bits (995), Expect = 1.070e-131
Identity = 202/300 (67.33%), Postives = 237/300 (79.00%), Query Frame = 1
Query:   25 LVACAAAVLLAPSEAFTGGLNLAASS----RHQIGRRRMTNMMAIDPITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQ 912
            L+ CAA   +AP+ AFTGG+ LA ++    R          MMAIDP TVH++G++VNAVGS GLD TWLSHV+HG++DAAA     V +E    NP   WI FIRSSVL IN+FYKG+G+EQSFGL+IVTFTL VKTLLVPLQ IQLQSSEKM+ LQPTVK+IN KFGQNKEAA+AAT+RLY+ TKVNPLIGCLPALLQ    FPVFIGLYRAI+GFGT+AVA+E FLW+PSLQGPTF+ GRGIGWL  +VDG P LGWHDTLCY++IP ILVLSQKLSM+LL  P+   DD   SS++
Sbjct:   10 LLGCAA---IAPTAAFTGGVGLARTAGGRDRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAKGPNPFNMWIEFIRSSVLGINEFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQ----FPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPPDDGPDDATGSSLK 302          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A836CB90_9STRA (60Kd inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB90_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.020e-80
Identity = 140/289 (48.44%), Postives = 183/289 (63.32%), Query Frame = 1
Query:  139 MAIDPITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAPAEV-----AKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWLN-HWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            M +DP+ +H     V  V     D +WLSHV  G+ADA AA    V     AK+   F    +++    + +  I+  Y+ +G++ +FGLSIVTFT+ VKT+L+PL F+QLQS+EKMQ + P  KKI E +  +K       SRLY  TKVNPL GCLP+  Q     PVFIGLYR++     E V NE FLWIP+LQGP FD GRG+ WL  +WV   P LGW DT+ Y +IP +LVLSQ +SM +L  P  P D E+A   Q V++YLP++IGWFSL VP+ALG+YW
Sbjct:    1 MMLDPVHLHHTVSSVLDV-----DQSWLSHVASGIADATAAVQDGVDGVVQAKKDDWF---AQFVNQFEAIIKGIDAGYEKIGIQNAFGLSIVTFTVLVKTVLLPLNFLQLQSAEKMQQITPVQKKIAEMYPDDKATQQIIVSRLYEQTKVNPLAGCLPSFAQ----IPVFIGLYRSLQQLAAENVVNEPFLWIPNLQGPVFDKGRGVQWLTENWVGLTPSLGWADTIAYCSIPILLVLSQSISMKMLSPPVDPKD-ESAMRTQQVLKYLPLMIGWFSLQVPAALGVYW 276          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 2.940e-74
Identity = 123/269 (45.72%), Postives = 172/269 (63.94%), Query Frame = 1
Query:  202 GLDPTWLSHVLHGVAD---AAAAAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAG--RGIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSD--DENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            G+DP WL  VL G+AD   AAA A          F+PI    G    ++  ++     +GV  ++G+SI+ FTL VK +  PL + QL S+ KMQ+L P VK++  ++  N EAA+ A  +LY T  VNPL GCLPAL Q     P+FI LYR+++    E    ESFLWIPSL+GPTFD+     + W+  W DGAP LGWHDT+ Y+TIP ILV++Q +S  ++Q  + PS   DE+ ++ Q ++++LP++IGWFSL+VPSALG+YW
Sbjct:   72 GVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQ----IPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYW 336          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A8J6C7A1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7A1_DIALT)

HSP 1 Score: 239 bits (609), Expect = 4.290e-73
Identity = 140/330 (42.42%), Postives = 198/330 (60.00%), Query Frame = 1
Query:   16 VTKLVACAAAVLLAPSEAFTGGLNLAASSRHQIGRRRMTNMMAIDPITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAP-AEVAKEG----GNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWL-NHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            V  LVAC   + L  S A T  L+ A +    +   R    +A   +   AV   V+ +     D    +H L  +ADAAAAAP A+VA  G     + N   +++  IR+S++++++     GV  ++  SI  FTL VK  ++PL + Q++ +  MQ L P  K++ + FG N +A    TS LYS  +VNPL GCLP+LLQ     PVFIGLYRAI+G   + V +ESFLWIP+L+GP  + G G+GWL ++WVDG P LGWHDTLCYLT+P +LVLSQ LSM +L  P       +A   Q ++++LP +IGWF+L+ P+ LG+YW
Sbjct:    8 VATLVAC---LTLEASAARTPRLHGAHAPVRSVLHSRAAPRVAARMVDASAVHSLVHGLP----DALGATHAL--LADAAAAAPPADVASAGTGAASDPNIFDQYVSLIRTSIVSLHESLFTAGVPYAYAASIFLFTLCVKLFVLPLNWKQMEGTVAMQKLAPQQKQLQKWFGDNPQALQIQTSMLYSENQVNPLAGCLPSLLQ----IPVFIGLYRAIIGLSKDNVLSESFLWIPTLEGPVSEYGAGLGWLTDNWVDGHPSLGWHDTLCYLTLPLVLVLSQSLSMRILTPPTVGETSPDAERTQQILKFLPFMIGWFALSAPAGLGLYW 324          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A4D9CYJ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.630e-72
Identity = 125/275 (45.45%), Postives = 177/275 (64.36%), Query Frame = 1
Query:  199 TGLDPTWLSHVLHGVADAA--------AAAPAEV---AKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWL-NHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            T LDP WLSHV  GVADAA        AA  A     AKE G F+   +++  +  ++  ++     LGV  ++GL+I+ FT  VK  L+P+ + Q++S+++MQ+L P  K++ +K+G+NK   +  T++LY   +VNPL GCLPAL Q     P+FI LYR+++     +  NE FLW+PSL GP +   RG  WL  +WVDG P LGWHDT+ +LTIP IL+L+Q +S  LL TP  PSDD   +  Q V++YLPI++G+FSL+VPS LG+YW
Sbjct:   18 THLDPAWLSHVFQGVADAAMTSLDATNAAVDATTDAAAKEPGFFD---KFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQ----IPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLL-TP--PSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYW 282          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: W7TN75_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN75_9STRA)

HSP 1 Score: 238 bits (607), Expect = 2.830e-71
Identity = 123/275 (44.73%), Postives = 175/275 (63.64%), Query Frame = 1
Query:  199 TGLDPTWLSHVLHGVADAAA-----------AAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIGWL-NHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            T LDP WLSHV  GVADAA            A     AKE G F+   +++  +  ++  ++     LGV  ++GL+I+ FT  VK  L+P+ + Q++S+++MQ+L P  K++ +K+G+NK   +  T++LY   +VNPL GCLPAL Q     P+FI LYR+++     +  NE FLW+PSL GP +   RG  WL  +WVDG P LGWHDT+ +LTIP IL+L+Q +S  LL TP  PSDD   +  Q V++YLPI++G+FSL+VPS LG+YW
Sbjct:  120 THLDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFD---KFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQ----IPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLL-TP--PSDDPKTAQTQRVLKYLPIMVGYFSLSVPSGLGVYW 384          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 231 bits (588), Expect = 3.870e-69
Identity = 126/284 (44.37%), Postives = 171/284 (60.21%), Query Frame = 1
Query:  151 PITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFY---KGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAG--RGIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            P     VG  + A+   G+D T L  V  G+ADA AA     A    N    G + G + ++   I   +   KG GVEQS+G +I+ FTL +K +  PL + QL S+ KMQ+LQP VK I ++   N EAA+ A + LY   +VNPL GCLP+L Q     P+FI LYRA++    E   +E FLW+PSL+GP F A     + W+  W +G P LGWHDTLCYL+IP ILV++Q +S  L+  P+    + + S  Q +++YLP+LIGWFSLNVPS LG+YW
Sbjct:   47 PAATSGVGG-LRALADGGIDFTVLHQVFSGLADATAATADAAADAAANNG--GVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQ----IPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGAEADTS--QAILKYLPLLIGWFSLNVPSGLGLYW 321          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: A0A7R9UFB5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFB5_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.120e-68
Identity = 116/262 (44.27%), Postives = 163/262 (62.21%), Query Frame = 1
Query:  205 LDPTWLSHVLHGVADAAAAAPAEVAKEGGNFNPIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGR--GIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIY 984
            +DP  LSH + G+A  AA   +EVAK      P+G  I     ++  ++   KGLG++  +G +I+ FTL +K +  PL   QL+S+ KMQ++ P +++I  KF  N E A+   ++LY    +NPL GCLP+L Q     P+FI LYR+I+    + V  E FLW+PSL+GPT+ A +   + WL  W DGAP LGWHDTLC+LTIP ILVLSQK+S  +LQ+     +  +A+    ++  LP +IGW SLNVPS LGIY
Sbjct:   65 MDPLVLSHAVQGLAQDAADVASEVAKSDQGGGPLGPLIAGTSFAITGLHDLLKGLGLQNPYGYAIILFTLLIKAVTFPLNAKQLESTGKMQAINPKIREIQTKFANNPEKANQMIAQLYQQYDINPLAGCLPSLAQ----IPIFIALYRSILNLSKDNVLTEPFLWLPSLEGPTYGAEQKDALQWLTTWQDGAPMLGWHDTLCFLTIPVILVLSQKISQKVLQSDAQQPEGASAA----ILNILPFMIGWVSLNVPSGLGIY 318          
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 220 bits (561), Expect = 2.830e-65
Identity = 115/274 (41.97%), Postives = 166/274 (60.58%), Query Frame = 1
Query:  217 WLSHVLHGVADAAAAAPAEVAK--EGGN---------FNPIGEW----IGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFIQLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLPALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGR--GIGWLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENASSIQTVIQYLPILIGWFSLNVPSALGIYW 987
            WL   L GVADAAAA   + A   EG               G W    IG I  ++  +++  +G G++ ++GLSI+ FT+ VK + +PL + Q++S+ KMQ++QP +K+I  K+  +        ++LYS   VNPL GCLPAL+Q     P+FI LYRA+         NE FLW+P+L+GPT+ AG   G+ WL  W    P LGWHDT+ +LT+P IL++SQ +S  +LQ P +  DD NA   Q ++++LP ++G+FSLNVPS LG+YW
Sbjct:  104 WLLQTLQGVADAAAATAPDTAGAVEGSKEMTGAAXXXXXXXGGWLAAPIGAIEKAITFMHETLEGAGLQNTYGLSIIAFTVLVKLVTLPLNYKQIESTTKMQAIQPKMKEIQAKYKSDPTLQQQKMAQLYSDNNVNPLAGCLPALVQ----IPIFISLYRALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQ-PAANKDDPNAQQSQAILKFLPFMVGYFSLNVPSGLGVYW 372          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8568.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L973_9PHAE3.810e-15169.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS38_ECTSI1.070e-13167.33Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A836CB90_9STRA2.020e-8048.4460Kd inner membrane protein-domain-containing prot... [more]
D8LUC7_ECTSI2.940e-7445.72Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A8J6C7A1_DIALT4.290e-7342.42Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A4D9CYJ8_9STRA2.630e-7245.45Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TN75_9STRA2.830e-7144.73Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
A0A835YLS0_9STRA3.870e-6944.37Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7R9UFB5_9STRA1.120e-6844.27Hypothetical protein (Fragment) n=2 Tax=Pinguiococ... [more]
W7U5Y4_9STRA2.830e-6541.97Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8568contigA-nodosum_M_contig8568:15659..21567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LUC7
Preferred nameALB3.1
PFAMs60KD_IMP
Model size987
Max annot lvl2759|Eukaryota
KEGG koko:K03217
KEGG TC2.A.9
KEGG Pathwayko02024,ko03060,ko03070,map02024,map03060,map03070
KEGG ModuleM00335
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0006996,GO:0008104,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009658,GO:0009668,GO:0009987,GO:0010027,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0017038,GO:0019904,GO:0022607,GO:0031976,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034357,GO:0034613,GO:0042651,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0044743,GO:0045036,GO:0045038,GO:0045184,GO:0046907,GO:0050789,GO:0050793,GO:0050794,GO:0051179,GO:0051234,GO:0051259,GO:0051291,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0061024,GO:0065002,GO:0065003,GO:0065007,GO:0070206,GO:0070208,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072596,GO:0072598,GO:0072657,GO:0090150,GO:0090342
Exons6
Evalue4.82e-75
EggNOG OGsCOG0706@1|root,KOG1239@2759|Eukaryota
Descriptionmembrane insertase activity
Cds size987
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044,ko03029
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8568.2.1prot_A-nodosum_M_contig8568.2.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig8568 15659..21567 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680870242.330036-CDS-A-nodosum_M_contig8568:15658..158961680870242.330036-CDS-A-nodosum_M_contig8568:15658..15896Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 15659..15896 +
1680870242.3562827-CDS-A-nodosum_M_contig8568:19366..194921680870242.3562827-CDS-A-nodosum_M_contig8568:19366..19492Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 19367..19492 +
1680870242.3670485-CDS-A-nodosum_M_contig8568:19753..200131680870242.3670485-CDS-A-nodosum_M_contig8568:19753..20013Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 19754..20013 +
1680870242.3776968-CDS-A-nodosum_M_contig8568:20456..205491680870242.3776968-CDS-A-nodosum_M_contig8568:20456..20549Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 20457..20549 +
1680870242.3883414-CDS-A-nodosum_M_contig8568:21018..212131680870242.3883414-CDS-A-nodosum_M_contig8568:21018..21213Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 21019..21213 +
1680870242.45958-CDS-A-nodosum_M_contig8568:21492..215671680870242.45958-CDS-A-nodosum_M_contig8568:21492..21567Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig8568 21493..21567 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig8568.2.1

>prot_A-nodosum_M_contig8568.2.1 ID=prot_A-nodosum_M_contig8568.2.1|Name=mRNA_A-nodosum_M_contig8568.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=329bp
MNPLRVTKLVACAAAVLLAPSEAFTGGLNLAASSRHQIGRRRMTNMMAID
PITVHAVGDYVNAVGSTGLDPTWLSHVLHGVADAAAAAPAEVAKEGGNFN
PIGEWIGFIRSSVLNINQFYKGLGVEQSFGLSIVTFTLSVKTLLVPLQFI
QLQSSEKMQSLQPTVKKINEKFGQNKEAASAATSRLYSTTKVNPLIGCLP
ALLQASDAFPVFIGLYRAIVGFGTEAVANESFLWIPSLQGPTFDAGRGIG
WLNHWVDGAPPLGWHDTLCYLTIPCILVLSQKLSMSLLQTPESPSDDENA
SSIQTVIQYLPILIGWFSLNVPSALGIYW
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mRNA from alignment at A-nodosum_M_contig8568:15659..21567+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig8568.2.1 ID=mRNA_A-nodosum_M_contig8568.2.1|Name=mRNA_A-nodosum_M_contig8568.2.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5909bp|location=Sequence derived from alignment at A-nodosum_M_contig8568:15659..21567+ (Ascophyllum nodosum dioecious)
ATGAATCCTCTGCGAGTCACGAAGTTGGTGGCATGTGCTGCCGCTGTACT TTTAGCACCATCCGAAGCTTTCACCGGTGGGCTGAACCTTGCGGCTTCAT CTAGGCATCAAATCGGTCGAAGAAGAATGACAAATATGATGGCCATTGAT CCTATAACGGTTCATGCTGTCGGAGACTACGTGAATGCTGTAGGGAGTAC CGGCCTTGACCCAACATGGCTGTCGCACGTGTTGCACGGTGAGTGATCTT CTGATCAAACAACTTCGTGCTCAGGATTGACGTTTTTGCAGCTTGTTTTG GGAGAAGGTCTGGATACGGTGGGGAACGGGATGGCGAAGTGATCACCTCA CAGGGTGCGCTCATGTGCCGCAGTTTTGCTTTTAAAAAGTAGGTTATGAC GTTTATGAAGTCAGCATGTTCAGGGTATACTTAATTGTACATCGGCCGCG ACTTTACTGGTTACAGAATTTGCACAAACTGAAGTACGGTACAACAGTTC CGGTACATACTGTTTTATGTACTGTACACGTGGTCAAGCGTTCCCCTAGG CCAAGGTTAACCTTGGCAAAAATACTTGACGAGTTTAGAGGGAAAAACTG AATCGCATCTGAACCTTCCTATTAATATCAACACACCGCCCGAGGGAGAT GTGTATGTGTCGAAACGTCTAATAGTTGGGAACATTGGCTATTTGAACAA AAACCCTGTTTGGACTATTAGGATATTTGGACCAAGGATCCCGACTGTGT CTTGGTTGTGGTGTTTAAAGAAAAATCAGAACGCACCTATTACTGCACCC ACCATGCTGGCCGTCTCCGCGATATTCTATGGTTTAACCCTGAGGGACTT GATTAATAATAAGTTTTACATTCGACTTCGATTCACCAGTACTTGAACTC GATCCCAAACCCAATGCTGGTATAACACAACTGCATCATATCCAGGTTCA TCGTTTGTTTTCGCCTCTGTTTTGGTATACCAGGTATGTATGTATGTATG TATGTATGGTCATCACATATAGCAGAGTATGGATCAACCGGGTAAGGTTG TCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATACTCCCCTGTCC CCGTACGTGCCTGAGAATTTGGTCTCGCGAGATGGGTTCAGCAGTCCCGT CCCGCGTCATCCTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTCACT TACGGGATTCCTCGCGAGTTCCGCGGCGGCGTCCATTTATGAAACCGCCA TACGCCATCGGATCAGTCCCGAGTTTATGGGGTCACGCAATTGCGTATCG ATGGCGTTCACTGCCGAGAGTCCGGCGGCACAGGGCCAGTAAACCTCAAG GTAGTTCCGAACGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTAATA TGCGCCTCTCTTTCCCACACCCACTATTGGTATGAAGTGAGCATGTTGAA AATACCGGCGGTATGTAATTATGTGTGTATGGTCACACATATAGCAGAGT ATGGATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAG GGAAAGTTATTTTTTTTCTGTCCCCGTTCGCGCCTGAGAATTTGGCCTCG CGAGACGGGTTCAACAGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATAC TCAGGCTGAATCTGGCGCTTACTTACGGGATTCCTCCCGAGTTCCGCGAC GGCGCCCATTTATTCATTTAGAACCCGCCATACGCCATCGGGTCAGTCCC GAGTCTATCGGGTCACGCAACTACGTACCGATGGCGTTCACTACCGAGAG TCGGCCGGCACAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTG CCTTGGCGGGTCACCATGGACCAATTAATACGCGCCTCTCTTTCCCACAC CCACTATTGGTATGAAGTAGGCATGTTGAAAGTACCGGCGGTGTGTACCT GCATGACGGTCAAAGAAATTAAGGGTGCATAAATTGTAACGGTGGGTTTC TCCCCGATATTATACTAAAATGTTGACCCTATGCTACTAACATTGCGGAA CCCGTTCAAATCTAATGAAGATTTCTTGTTCTTGCAGCCAATGTTCACAC CTAAACTTTTTGACACTTTTCCCCATGACTGGGTGGATGCTCAGAAGGTT TATATTAATTGGTCCATGGTGACCTGCCAAGGCAGCACTCCTTCGGAACT ACCTTGAGGTTACTGGCCCTGTGCCGGCGGACTCTCTGCAGTGAACGCCA TCGGTACGcAATTAAATTGCGTGACTCGATAAACCAGGACTGACCCGAGC GTATGGCGGTTTCATAAAATGGACGCCGCCGCGGAATCGGGAGGAATCGT AAGTAAGCACCAGATTCAGCCTGAGTATGGAGATGAGCAGGCTGACACGG GACGGGACGGCTGAACCCCAAATTCTCAGGCACGCACGGGGACAGGGGAA TATTTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCCACCTTACCCGG TTGATCCATACTCTGCTATATGTGATGATCATGCATACATACATACATGT AAGGACACCAAAACCAAGATACACTATTTATAGCATTATCCGCGATGTAT GCTTTAATATCGGGAAGAGGTCCACCGTCGCCGTGCTGTACACTTACATT AATCTCCTTGTAAGTACACCAAAACCAAGATACACTCTTAATGTTTATAG GAGCTCTGATAGCGAAGACTCCCATTTTGTAGTATGTATGTATGTATGTA TGTATGTATGTATGGTCATCACATATAGCAGAGTATGGATCAACAGGGTA AGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATAATATTCCC CTGTCCCCGTGCGTGCCTGAGAATTTGGTCTCGCGAGACGGGTTCAGCCG TCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCAGGCTGAATCTGGTG CTTACTAACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCATTTATGAAA CCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCAATTGC GTACCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACAAGGCCAATAAAC CTCAAGGTAGTTCCGAACGGGTGCTGCCTTGGCAGGTCACCATGGACCAG TTAATATTCGCCTCTCTTTCCCACACCCACTATTGGTTTGAAGTGGGCAT ACTGAAAGTACCGGCGATAGTACAGCTATATGGTACACGGCGCTGCACCT TAACAAACCCTACGGATAGGTAATGGATGTTCTTGCATGACCGCGATGCC TTCCGCAATGTCTGCTTTTCTCCTGTCAGTACTATTAATAGGAGACAAAG GCGGATTCAATATCCTCTGTGTAACTACCAGTATACTTCTACAAGTAGAG CGATAATCTTTCCACAAACCCTCTTTCCCGCCGGTTTTCTGTAGAACCTC TAGCCCAGTTGCATCTCTGTATACGGATCGCCTGTCGCCAGGCCGCTGTA TTTCCAGCAATCACCTCTTTCCACCTGATCTCAGTGTGAAACCTGGCAAT ATAGCGCAACCATTTATCAAACCTTGTTGAACACAACGCCGATCGTAATC GGCCCGAACCGTGCCGGCCTGGGCACCTCAACTTTTGGTTGATGAGCTCT GACGGCACTAGTCGCTTCGCCTATCTTGGTCTTGTTTCTGCCTCGGCGTG GTGGACAGGTGTTGCTGACGCCGCGGCGGCCGCGCCTGCGGAGGTAGCCA AGGAAGGGGGAAATTTCAACCCCATCGGCGAGTGGATCGGTTTCATACGG AGCAGTGTTCTCAACATCAACCAATTTTATAAGGGTGAGCAACGAGTGAT GAGGACGGCGTTTCACCCTATTGCGGGCTTTGCGCGGCTACTGCTGCTGC TGCTGCTGCTGAAAGTAAAGTCGCTCCCTCGGAAGAGCTTTTCGTGTACT ACGTACTTCACTCGCGAATCTTCAAAACACACACCCCTTTTTCCACTGTA TGTTGTAACTATTTACGAGTGGTGCACTTTTTTATACTGCGGCCTAAGCT TCTATATGCCCCGCCCCCCCCCGGTACTCCCCACCCCGCGAAAAGGTTTA GGCGTGGAACAGTCCTTCGGGCTGTCGATCGTGACTTTTACCCTCTCCGT GAAGACGCTTCTTGTGCCGCTGCAGTTCATCCAGCTGCAGTCTTCGGAGA AGATGCAGTCGCTGCAGCCAACGGTCAAGAAGATCAACGAAAAATTCGGC CAGAACAAGGAGGCTGCTTCAGCTGCCACCAGTAGGCTGTACTCGACCAC CAAGGTCAACCCGCTGATCGGTTGCCTCCCTGCCCTCCTTCAGGCGAGCG ACGCTGTAGCGAACGGGGACACTGGCGAGGGCGTAACGATGCGCCGGCAG TGCGGTGTTGAAAGCCTGCAGTATGATGAGACTTTTTTTCGAGATGCGCG AAGTGTGGGATTCGATGGTGCAATGGCTCAGGGGATCACTTGATCCGATA CTGCACTTCGACTCTCCAGGGCGGCACTATTACTAGTTCCCTTGAAGGTT CCCCAAAGCAGCGCCGGTTGCGTCGGTAGTGACGCCGGAGAAGGACCCTT GTTGCTTTGAAAATGCATACATTTCGAGGTTAAATGTTTTGTAGACAGTT ATTTCCTTCTTCAAATGTTTTCTAAACTGTTGAAATGATCTACTCCCGCT ATAATTGTTTATCTAGAGCTAGGGCTACATTTCTATTTCACTTCGCTCTC ACTGAACAGGCTCATGTTTCATGTGTTGTGCTGCACCTCCTCTTGCAGTT TCCCGTGTTCATCGGGCTGTACCGCGCCATTGTCGGTTTTGGCACGGAAG CTGTCGCCAACGAGAGTTTCTTGTGGATCCCGAGCTTGCAGGTGGGACGC GCTCAGCACCGTCGGTAGAACAAAACCACTCGAGGCGTTCGTCAATGCAG GGGAGCGTTCGTTCGACTCACCCCTTCGTGCTCTGCTACAGTTGATGACG ACGTACCACCTTTGATACGCCATCATCCCCTTCGCGCCTTCCGGACCGCT GTCGCGATGTTGCCGCACCCGTGCTAGCAGATGAGAAACCAAAGTAGGAA CTTTCAACTGTACTGTTAGACACTGGCGCAGAAAGATCCTCGGCCAGGGT GCGGCACCATCGCTGACGCGCCGGAACGGCGGAAGCGCGATGTAAAACAA GTACAGTACTTTGTACGAGTACTTCACCGCCGCGCTTTCGAGTGTGATGC AGAGAGGACCCGTGCGAGCTTTTTGCGGGGGCAGCGTTAAATGCATGCGC TTTGCTATTTTTACCCCCTGATTCCTCCTTTGCTTTGCTTTGCTGCCGAC ACGACGTTAGGGACCCACGTTCGACGCGGGTCGTGGCATCGGATGGCTCA ACCATTGGGTCGACGGCGCCCCGCCCCTGGGCTGGCACGACACCCTGTGC TACCTCACCATTCCATGCATCTTAGTCCTGTCGCAGAAGCTGTCCATGTC GCTCCTGCAGACCCCGGAAAGCCCCTCGGACGACGAAAACGCATCTAGTA TTCAGGTGAGCGGTGGTGTGCGCCACGTTTTAAGAAAGAAAACGTCCTGT GCTTGTTTTCGTGATTTGTTGTAGGGCAACAGAGTTTTGCGGCGACCGAA CAGCGGTACCCGTTTCAAGCCTGCTTCGCGAGAAACCTACTCAACGCGTT GTGCGGGGCGGATAGAGGGTTCCAGCGTTTTGTGCTGTTCCCACCGCGTT GACGCCTCCCTTCCGATCGCGCTCGCTCGTTTTTCCTTTCTTTGCCCGGC TCGGACCAAACATCATCGTACTGTTTCGCCGAAGACCGTCATCCAGTATC TGCCGATTTTGATAGGTTGGTTCTCTCTCAACGTACCCTCAGCCCTCGGC ATCTACTGG
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Coding sequence (CDS) from alignment at A-nodosum_M_contig8568:15659..21567+

>mRNA_A-nodosum_M_contig8568.2.1 ID=mRNA_A-nodosum_M_contig8568.2.1|Name=mRNA_A-nodosum_M_contig8568.2.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=987bp|location=Sequence derived from alignment at A-nodosum_M_contig8568:15659..21567+ (Ascophyllum nodosum dioecious)
ATGAATCCTCTGCGAGTCACGAAGTTGGTGGCATGTGCTGCCGCTGTACT
TTTAGCACCATCCGAAGCTTTCACCGGTGGGCTGAACCTTGCGGCTTCAT
CTAGGCATCAAATCGGTCGAAGAAGAATGACAAATATGATGGCCATTGAT
CCTATAACGGTTCATGCTGTCGGAGACTACGTGAATGCTGTAGGGAGTAC
CGGCCTTGACCCAACATGGCTGTCGCACGTGTTGCACGGTGTTGCTGACG
CCGCGGCGGCCGCGCCTGCGGAGGTAGCCAAGGAAGGGGGAAATTTCAAC
CCCATCGGCGAGTGGATCGGTTTCATACGGAGCAGTGTTCTCAACATCAA
CCAATTTTATAAGGGTTTAGGCGTGGAACAGTCCTTCGGGCTGTCGATCG
TGACTTTTACCCTCTCCGTGAAGACGCTTCTTGTGCCGCTGCAGTTCATC
CAGCTGCAGTCTTCGGAGAAGATGCAGTCGCTGCAGCCAACGGTCAAGAA
GATCAACGAAAAATTCGGCCAGAACAAGGAGGCTGCTTCAGCTGCCACCA
GTAGGCTGTACTCGACCACCAAGGTCAACCCGCTGATCGGTTGCCTCCCT
GCCCTCCTTCAGGCGAGCGACGCTTTTCCCGTGTTCATCGGGCTGTACCG
CGCCATTGTCGGTTTTGGCACGGAAGCTGTCGCCAACGAGAGTTTCTTGT
GGATCCCGAGCTTGCAGGGACCCACGTTCGACGCGGGTCGTGGCATCGGA
TGGCTCAACCATTGGGTCGACGGCGCCCCGCCCCTGGGCTGGCACGACAC
CCTGTGCTACCTCACCATTCCATGCATCTTAGTCCTGTCGCAGAAGCTGT
CCATGTCGCTCCTGCAGACCCCGGAAAGCCCCTCGGACGACGAAAACGCA
TCTAGTATTCAGACCGTCATCCAGTATCTGCCGATTTTGATAGGTTGGTT
CTCTCTCAACGTACCCTCAGCCCTCGGCATCTACTGG
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