mRNA_A-nodosum_M_contig854.30.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: D7FPI4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI4_ECTSI) HSP 1 Score: 133 bits (334), Expect = 1.270e-35 Identity = 72/84 (85.71%), Postives = 76/84 (90.48%), Query Frame = 3
Query: 213 MNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 464
M+EFNDLFV AREEME+A ESKETTYFDEEA+AAKE VE+AV LFEEVL SVDE KRTEIMR SGLRVEQLKAELDQLL SDDH
Sbjct: 1 MDEFNDLFVTAREEMEYAEESKETTYFDEEAAAAKEAVEEAVALFEEVLRSVDEKKRTEIMRSSGLRVEQLKAELDQLLISDDH 84
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A7S2CH79_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CH79_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.950e-21 Identity = 51/91 (56.04%), Postives = 68/91 (74.73%), Query Frame = 3
Query: 192 DEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 464
D EL ++++ NDLFV AREE+E A ESKETTY+DEEA A+E VE A+ + ++L S++E R E R +GL++EQLKAEL+ LL SDDH
Sbjct: 9 DPELRKRVDSLNDLFVEAREEIEMAEESKETTYYDEEAEIAQEAVEAALAEYGDILNSLEEPARGEFQRGNGLKMEQLKAELEILLHSDDH 99
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A836C9H1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9H1_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 1.270e-20 Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 3
Query: 189 SDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 464
+DE + RKM+EFNDLFV AREE+++A ESKETTYF++E AA+ VE A+ F E+L V+E ++ IMR +GL+VEQLK EL L+ +H
Sbjct: 64 NDEAIRRKMDEFNDLFVEAREEIQYAGESKETTYFNDEVKAAQAAVESALECFSELLNGVEEEQKQAIMRSNGLKVEQLKQELQLLMIEHEH 155
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A7S4JN07_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JN07_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.130e-19 Identity = 48/90 (53.33%), Postives = 68/90 (75.56%), Query Frame = 3
Query: 180 STLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLL 449
S+LS++EL +++EF DLFV AR +E A+S +TTYFDEEA AAKE V++AV F+ ++G +DE + +MRQ+GL+V QLK ELD +L
Sbjct: 75 SSLSEDELRSRLDEFQDLFVEARLSIEDCADSADTTYFDEEAEAAKEAVDEAVSAFDTLIGELDEETKGRVMRQNGLKVAQLKGELDLVL 164
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A7S2SM76_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM76_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 9.000e-15 Identity = 40/82 (48.78%), Postives = 62/82 (75.61%), Query Frame = 3
Query: 210 KMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLES 455
++NE +DLFV AREE++ A ES TTY++EEA AAKE VE A+ ++ +LG++++ E R +GL++EQL+AEL+ L+E+
Sbjct: 19 ELNELSDLFVEAREEIDLAMESIGTTYYNEEAEAAKEAVEAAISKYQAILGNLEDPHSGEFQRGNGLKMEQLRAELEGLIEA 100
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A2G2ZQ26_CAPAN (Uncharacterized protein n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A2G2ZQ26_CAPAN) HSP 1 Score: 80.1 bits (196), Expect = 1.370e-14 Identity = 42/82 (51.22%), Postives = 61/82 (74.39%), Query Frame = 3
Query: 207 RKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLE 452
R++++ N F AREE+E A ESKET YF+EEA A++ V++ + L++E+LG V E+++ I R GL++EQLKAELDQL E
Sbjct: 77 REVDKINLKFAEAREEIESAMESKETVYFNEEADCARDAVKEVLDLYQELLGKVSESEKGVIQRSMGLKIEQLKAELDQLNE 158
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A7S2A9P4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9P4_TRICV) HSP 1 Score: 79.3 bits (194), Expect = 2.620e-14 Identity = 42/95 (44.21%), Postives = 66/95 (69.47%), Query Frame = 3
Query: 165 PRAGLSTLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLL 449
P + +TLSD++L ++ +F + F AR +E A++ +TTYFDEEA AA+E V+ A+ FE +L +DE + ++RQ+GL+VEQLK EL+ +L
Sbjct: 60 PFSSGATLSDDDLRSRLEDFQEQFAEARLCIEDCADAADTTYFDEEADAAREAVDLALKTFESILAELDEETKGRVVRQNGLKVEQLKGELELVL 154
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: C1E637_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E637_MICCC) HSP 1 Score: 80.1 bits (196), Expect = 2.680e-14 Identity = 50/121 (41.32%), Postives = 71/121 (58.68%), Query Frame = 3
Query: 105 PSESRAAWYLAQEKLPG--FRVPRAGLSTLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQLLESDD 461
PS+ W A K+ G F A + LS E ++M+E ND F AREE+E A E+ TTYF+EEA AKEV E+ +G++ ++ +D +R R G+++EQLKAEL QL + D
Sbjct: 67 PSQLDQHWVNAFHKIHGRGFASSAAARAGLSPAETKKRMDEINDNFAEAREEIEAAMEAVGTTYFNEEAEYAKEVTEKTLGMYYKLCEEMDPEERAATQRAMGMKMEQLKAELKQLDHAHD 187
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: UPI001C4FFF6E (embryogenesis-like protein n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4FFF6E) HSP 1 Score: 76.3 bits (186), Expect = 5.330e-14 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 3
Query: 201 LARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSVDEAKRTEIMRQSGLRVEQLKAELDQL 446
++R+++E N F AREE+E A ESKET YFDEEA +A+E + + +F+ +L + E +R + R GL++EQLKAEL+QL
Sbjct: 1 MSREIDEINLKFAEAREEIEMALESKETVYFDEEAESAREAAKVVLDMFQGLLAKLPENERASLQRSMGLKIEQLKAELEQL 82
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Match: A0A7S0FJV1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FJV1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 5.690e-14 Identity = 41/97 (42.27%), Postives = 68/97 (70.10%), Query Frame = 3
Query: 177 LSTLSDEELARKMNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGSV-DEAKRTEIMRQSGLRVEQLKAELDQLLESDDH 464
L+T+ + +L ++M+EF DLFV AR +E A ES+ETTYF E+ AA+E V++AV F+ ++ + D+ ++ ++R +GL+VEQLK EL +++ H
Sbjct: 80 LATMPENDLRKRMDEFQDLFVEARLCIEDAQESQETTYFAEDLDAAQEAVDEAVAAFKGIVNDIEDKDQKNSVLRSNGLKVEQLKGELQMIIDGHGH 176 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig854.30.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig854.30.1 >prot_A-nodosum_M_contig854.30.1 ID=prot_A-nodosum_M_contig854.30.1|Name=mRNA_A-nodosum_M_contig854.30.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=85bp MNEFNDLFVAAREEMEFAAESKETTYFDEEASAAKEVVEQAVGLFEEVLGback to top mRNA from alignment at A-nodosum_M_contig854:238972..244038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig854.30.1 ID=mRNA_A-nodosum_M_contig854.30.1|Name=mRNA_A-nodosum_M_contig854.30.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5067bp|location=Sequence derived from alignment at A-nodosum_M_contig854:238972..244038+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig854:238972..244038+ >mRNA_A-nodosum_M_contig854.30.1 ID=mRNA_A-nodosum_M_contig854.30.1|Name=mRNA_A-nodosum_M_contig854.30.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=255bp|location=Sequence derived from alignment at A-nodosum_M_contig854:238972..244038+ (Ascophyllum nodosum dioecious)back to top |