prot_A-nodosum_M_contig848.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig848.12.1
Unique Nameprot_A-nodosum_M_contig848.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length122
Homology
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BLAST of mRNA_A-nodosum_M_contig848.12.1 vs. uniprot
Match: D8LRH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH3_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 1.150e-28
Identity = 66/129 (51.16%), Postives = 83/129 (64.34%), Query Frame = 0 
Query:    1 MPGVTTPSDVERALAAARFMPGRRGNA--DVTRALPPPLVLPTGLMPCMVGSFRVDKSEGVHRCSGTWAMTKVGLETVADVEACANPFEFR------TRAGPESFPYSGAYEGHFLVQHPLKPVTRVDE 121
            +P   + +DVERAL+AA F+P R   A       LPPPL LPTG MPCMVG F+VD+  GVHRC+G WAM K  L+  AD    A+PFEFR         G   FP++G Y+GHFLV+ P KPV++V+E
Sbjct:  424 LPQKCSEADVERALSAAHFVPDRSSPAWGGGGPPLPPPLPLPTGSMPCMVGFFKVDEKTGVHRCAGNWAMNKADLQA-ADKNR-ASPFEFRMVEGGGAGTGVVRFPHTGKYQGHFLVRQPPKPVSKVEE 550
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig848.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRH3_ECTSI1.150e-2851.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig848contigA-nodosum_M_contig848:138582..138947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig848.12.1mRNA_A-nodosum_M_contig848.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig848 138582..138947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig848.12.1 ID=prot_A-nodosum_M_contig848.12.1|Name=mRNA_A-nodosum_M_contig848.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=122bp
MPGVTTPSDVERALAAARFMPGRRGNADVTRALPPPLVLPTGLMPCMVGS
FRVDKSEGVHRCSGTWAMTKVGLETVADVEACANPFEFRTRAGPESFPYS
GAYEGHFLVQHPLKPVTRVDED
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