mRNA_A-nodosum_M_contig843.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: D8LLW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLW8_ECTSI) HSP 1 Score: 289 bits (739), Expect = 3.150e-84 Identity = 149/198 (75.25%), Postives = 169/198 (85.35%), Query Frame = 1
Query: 1039 AAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGDDDKTGETGLIDVANASDHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELEMG 1632
AAVIPLFLV+ FEVAYAVHKRRSV+FCGIVFDQGHRR VEPCSW LRNFV IV+VL+FVV I+VN +GDD+K G TGL++ +AS HLLLALLP TGM +ALY+A+ + KYGN+ASIVVQS+VCNGWMF FLGTLALL GQVP EW +RV NETGQVL LLS+IAIGREIG EVQAAD+FS FL+KENELE G
Sbjct: 80 AAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPP-EWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENELESG 276
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A835YJZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ6_9STRA) HSP 1 Score: 196 bits (498), Expect = 3.280e-51 Identity = 99/196 (50.51%), Postives = 133/196 (67.86%), Query Frame = 1
Query: 1039 AAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGDDDKTGETGLIDVANASDHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELE 1626
A V+PLFLV +FE+AY VHK RSVKFCGIVFDQGHR + EPCSWFLR+ VR+ A+ +F++GI+V I DD G G AS +L L+PAT MA ++LY++I + +YGNNASIVV S+ CN WM LG+L +LAGQ+P +R +N GQ +LL +++ + E+ E A D F+ FL +EN L+
Sbjct: 83 ALVVPLFLVALFEMAYTVHKTRSVKFCGIVFDQGHRINTEPCSWFLRHAVRMCALGLFILGILVYFHSIGSDDAAAGTGGYTQFGGASVQFILCLVPATAMAAVSLYLSIFMWRYGNNASIVVHSTACNRWMLLLLGSLCMLAGQIPPAP-AFRASNALGQTILLATMLVVYHEVEREAAARDHFAEFLAEENRLD 277
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A6U6D2G5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D2G5_9STRA) HSP 1 Score: 139 bits (350), Expect = 5.060e-32 Identity = 84/217 (38.71%), Postives = 128/217 (58.99%), Query Frame = 1
Query: 1015 VSPVCGWSAAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRR----SVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGD----DDKTGETG---LIDVANASD---HLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENEL 1623
V V A +P+ LV+ FE+ Y VHK+R V FCG+ FD+G R + S+ LRN +RI+AV++F +GI V N +LGD D+ G G L+ D HLLL+LLP +A+ + Y + + +YG +S+VV SS+ N W PF GTLAL GQV SE+W + + + G ++ +++L+ + E+ ++ AAD+FS FL + E+
Sbjct: 83 VQAVYALQALEVPILLVVSFELTYLVHKKRGVNFCGMYFDEGRRVQKIITTPVKSFLLRNLIRILAVILFAMGI-VGNFDLLGDVSTVDELAGRAGWWSLVKDPRPWDQKWHLLLSLLPTAVLALCSFYFSFLLWRYGTESSMVVHSSILNPWFNPFFGTLALAVGQVFSEKW-FPLTSNIGLLIFVITLLLLMVEVDKDMVAADNFSVFLTEAAEM 297
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: W7TX25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX25_9STRA) HSP 1 Score: 135 bits (340), Expect = 5.300e-31 Identity = 79/220 (35.91%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 1000 LTAPPVSPVC-------GW--SAAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGD-DDKTGETGLIDVANAS-DHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELE 1626
L P +P C GW +A + PLFLV FE YAVHK RSVK+ GI FD+G R PCSWFLRN VR++A+ +F +G+IVN S D D G +G + + H ++++P+ +++ L +A I +YG ++++++ S GW + LG+L AGQ P+ Y + GQV+LL+SL+ R + +++ A + FL+++ ++
Sbjct: 57 LLVVPNTPFCTLSAQRFGWIMNAVIPPLFLVASFETGYAVHKHRSVKYLGINFDEGKRVDTAPCSWFLRNLVRLIALALFFMGLIVNFSVFFPDASDNAGMSGYLGLGRGDVAHYYVSIVPSLVFSLVTLVIAATIKRYGRHSTLLIPRSC--GWNWLLLGSLLQTAGQFPASTALYPSTSMAGQVVLLISLLLTHRLVLLDMGEAAKITEFLRRQKAVQ 274
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: W7U495_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U495_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.040e-30 Identity = 79/220 (35.91%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 1000 LTAPPVSPVC-------GW--SAAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGD-DDKTGETGLIDVANAS-DHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELE 1626
L P +P C GW +A + PLFLV FE YAVHK RSVK+ GI FD+G R PCSWFLRN VR++A+ +F +G+IVN S D D G +G + + H ++++P+ +++ L +A I +YG ++++++ S GW + LG+L AGQ P+ Y + GQV+LL+SL+ R + +++ A + FL+++ ++
Sbjct: 57 LLVVPNTPFCTLSAQRFGWIMNAVIPPLFLVASFETGYAVHKHRSVKYLGINFDEGKRVDTAPCSWFLRNLVRLIALALFFMGLIVNFSVFFPDASDNAGMSGYLGLGRGDVAHYYVSIVPSLVFSLVTLVIAATIKRYGRHSTLLIPRSC--GWNWLLLGSLLQTAGQFPASTALYPSTSMAGQVVLLISLLLTHRLVLLDMGEAAKITEFLRRQKAVQ 274
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A7R9U8D5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D5_9STRA) HSP 1 Score: 132 bits (333), Expect = 4.820e-30 Identity = 71/197 (36.04%), Postives = 119/197 (60.41%), Query Frame = 1
Query: 1039 AAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGDDDKTGETGLIDVANASD-HLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELE 1626
A +IPL LV +FE+AY VHK RSVKFCGI FD+GHR+S S+ +R + +A I + I+VN + DD+ G TG + + H++ A+LP+ +A+ Y+++ + YG+N S+ V +S N W F+G +A +AGQ+ ++E HY V + G+ +LL ++ + I +++ + F+ +L ++ E E
Sbjct: 113 AFIIPLLLVYVFELAYQVHKHRSVKFCGITFDEGHRKSFGLKSFLVRRSTQFIATAIVAMNILVNFDLLSVDDEDAGSTGYAGLERGENAHIIFAILPSIILALYVAYISVALWLYGSNNSMTVYTSFVNPWGIVFVGGIAQVAGQIFNDE-HYPVTSNGGETVLLSTIAFLIPHIVRDLEDVESFAKYLAEQEEEE 308
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A4D9D851_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D851_9STRA) HSP 1 Score: 135 bits (339), Expect = 1.320e-29 Identity = 79/220 (35.91%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 1000 LTAPPVSPVC-------GW--SAAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGD-DDKTGETGLIDVANAS-DHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQKENELE 1626
L P +P C GW +A + PLFLV FE YAVHK RSVK+ GI FD+G R PCSWFLRN VR++A+ +F +G+IVN S D D G +G + + H ++++P+ +++ L +A I +YG ++++++ S GW + LG+L AGQ P+ Y + GQV+LL+SL+ R + +++ A + FL+++ ++
Sbjct: 57 LLVVPNTPFCTLSAQRFGWIMNAVIPPLFLVASFETGYAVHKHRSVKYLGINFDEGKRVDTAPCSWFLRNLVRLIALALFFMGLIVNFSVFFPDASDNAGMSGYLGLGRGDVAHYYVSIVPSLVFSLVTLVIAATIKRYGRHSTLLIPRSC--GWNWLLLGSLLQSAGQFPASTALYPSTSMAGQVVLLISLLLTHRLVLLDMGEAAKITEFLRRQKAVQ 274
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A7S1YZR4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZR4_TRICV) HSP 1 Score: 131 bits (330), Expect = 1.990e-29 Identity = 78/211 (36.97%), Postives = 120/211 (56.87%), Query Frame = 1
Query: 1015 VSPVCGWSAAVIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRS---VEPC-SWFLRNFVRIVAVLIFVVGIIVNNSKILGD----DDKTGETGLIDVA------NASDHLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFL 1605
V + A +PL L++ FE+ Y VHKRRSV FCG+ FD+G R S P S+ LRNF+R++AV + +GI+ N +LGD D G G + + HLLL+LLP+ + + Y + + +YG +S+VV SS+ N + PF GTLAL GQ+ E W + + + G ++ ++L+ + E+ ++ AADDF+ FL
Sbjct: 84 VQAIFALQATQVPLLLIVTFELTYLVHKRRSVNFCGMYFDEGRRVSKIITTPMKSFVLRNFIRMLAVFLLAMGIM-GNFDLLGDVTQVDSLAGRAGWWALVQDPRGWSKKGHLLLSLLPSAVLVLCCFYFSFLLWRYGTESSMVVHSSILNPYFSPFFGTLALATGQLFPERW-FPLTSNVGLLVFCITLLLLMSEVDKDMVAADDFAGFL 292
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A7S3Y231_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y231_HETAK) HSP 1 Score: 130 bits (326), Expect = 2.040e-29 Identity = 76/188 (40.43%), Postives = 112/188 (59.57%), Query Frame = 1
Query: 1045 VIPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVGIIVNNSKILGDDDKTGETGLIDVANASD-HLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFL 1605
V+PLFLVI F++AY VHK RSV F I FD+GHR+ VEP SW +RN +R+VA + V +VN + +LG G +G +D + A + L+LLP T +A L +A + YG ++V+ ++V N W+ FLG + LAG V E Y V + G++ LL+ +I I I + Q ++ F+ FL
Sbjct: 84 VVPLFLVISFDIAYMVHKNRSVNFFCISFDEGHRKRVEPHSWVMRNLMRMVAACLVAVNALVNYN-VLGAAADAGRSGYLDWSAADPLEVTLSLLPGTVLAAFNLGIAFRLWLYGTQRALVIHATVWNEWILLFLGAMGQLAGLVAPTEL-YSVTSNAGEIFLLMCIIFIQYTIKKDFQLSNQFNLFL 269
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Match: A0A7S4RTW4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RTW4_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.490e-25 Identity = 74/209 (35.41%), Postives = 116/209 (55.50%), Query Frame = 1
Query: 1048 IPLFLVIMFEVAYAVHKRRSVKFCGIVFDQGHR--RSVEPC---SWFLRNFVRIVAVLIFVVGIIVNNS---KILGDDDKTGETG---LIDVANASD----------HLLLALLPATGMAVIALYMAICICKYGNNASIVVQSSVCNGWMFPFLGTLALLAGQVPSEEWHYRVANETGQVLLLLSLIAIGREIGMEVQAADDFSSFLQK 1611
+P+ L FE Y VHKRRSV FCG+ FD+G R R + S+ LRNF+R +AVL+ V+G++VN ++ D G G L + N ++ HL L+LLP + + + Y + + +YG +S+VV SS N W F GT+ L G+ SE+W Y +++ TG VL ++S + + E+ +++AA +F FL +
Sbjct: 96 VPILLQSTFETCYLVHKRRSVNFCGMYFDEGRRVNRGIATTPMKSFILRNFIRAIAVLLLVMGLVVNFDLLRNVVEVDRLAGRAGWWPLFERKNNAEGQQLDFSENTHLFLSLLPTAILILCSFYFSALLWRYGTESSMVVHSSCWNPWFSLFFGTIFLFIGECFSEKW-YPISSNTGFVLFIISYLHLMTEVDKDMKAASEFVEFLSQ 303 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig843.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig843.14.1 >prot_A-nodosum_M_contig843.14.1 ID=prot_A-nodosum_M_contig843.14.1|Name=mRNA_A-nodosum_M_contig843.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=346bp MFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVLIFVVback to top mRNA from alignment at A-nodosum_M_contig843:171128..176148+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig843.14.1 ID=mRNA_A-nodosum_M_contig843.14.1|Name=mRNA_A-nodosum_M_contig843.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=5021bp|location=Sequence derived from alignment at A-nodosum_M_contig843:171128..176148+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig843:171128..176148+ >mRNA_A-nodosum_M_contig843.14.1 ID=mRNA_A-nodosum_M_contig843.14.1|Name=mRNA_A-nodosum_M_contig843.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1038bp|location=Sequence derived from alignment at A-nodosum_M_contig843:171128..176148+ (Ascophyllum nodosum dioecious)back to top |